RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SUPT20HQ8NEM7 779 aa22.09■■□□□ 1.13
PHRF1-204ENST00000532550 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
PHRF1-204ENST00000532550 PCCAP05165 728 aaPredicted RBP22.08■■□□□ 1.13
PHRF1-204ENST00000532550 DPP8Q6V1X1 898 aaPredicted RBP22.08■■□□□ 1.13
PHRF1-204ENST00000532550 G2E3Q7L622 706 aa22.08■■□□□ 1.13
PHRF1-204ENST00000532550 MPNDQ8N594 471 aa22.08■■□□□ 1.13
PHRF1-204ENST00000532550 VPS33BQ9H267 617 aa22.08■■□□□ 1.13
PHRF1-204ENST00000532550 IQCA1LA6NCM1 817 aa22.07■■□□□ 1.12
PHRF1-204ENST00000532550 EIF6P56537 245 aaKnown RBP22.07■■□□□ 1.12
PHRF1-204ENST00000532550 SLC51AQ86UW1 340 aa22.07■■□□□ 1.12
PHRF1-204ENST00000532550 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
PHRF1-204ENST00000532550 ZNF541Q9H0D2 1346 aa22.06■■□□□ 1.12
PHRF1-204ENST00000532550 PPIP5K2O43314 1243 aa22.06■■□□□ 1.12
PHRF1-204ENST00000532550 JARID2Q92833 1246 aaPredicted RBP22.06■■□□□ 1.12
PHRF1-204ENST00000532550 L3MBTL3Q96JM7 780 aaPredicted RBP22.06■■□□□ 1.12
PHRF1-204ENST00000532550 DDX60Q8IY21 1712 aaKnown RBP22.06■■□□□ 1.12
PHRF1-204ENST00000532550 TAF1P21675 1872 aa22.05■■□□□ 1.12
PHRF1-204ENST00000532550 FLIIQ13045 1269 aa22.05■■□□□ 1.12
PHRF1-204ENST00000532550 NIM1KQ8IY84 436 aa22.05■■□□□ 1.12
PHRF1-204ENST00000532550 RTFDC1Q9BY42 306 aaPredicted RBP22.05■■□□□ 1.12
PHRF1-204ENST00000532550 PDE8AO60658 829 aa22.04■■□□□ 1.12
PHRF1-204ENST00000532550 GPC2Q8N158 579 aa22.04■■□□□ 1.12
PHRF1-204ENST00000532550 CELF1Q92879 486 aaKnown RBP22.04■■□□□ 1.12
PHRF1-204ENST00000532550 CACNA1FO60840 1977 aa22.04■■□□□ 1.12
PHRF1-204ENST00000532550 CEP350Q5VT06 3117 aa22.03■■□□□ 1.12
PHRF1-204ENST00000532550 IGKV5-2P06315 115 aa22.03■■□□□ 1.12
PHRF1-204ENST00000532550 RPS8P62241 208 aaKnown RBP22.03■■□□□ 1.12
PHRF1-204ENST00000532550 FKBP5Q13451 457 aaPredicted RBP22.03■■□□□ 1.12
PHRF1-204ENST00000532550 AOC3Q16853 763 aa22.03■■□□□ 1.12
PHRF1-204ENST00000532550 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
PHRF1-204ENST00000532550 HACL1Q9UJ83 578 aa22.03■■□□□ 1.12
PHRF1-204ENST00000532550 GJA3Q9Y6H8 435 aa22.03■■□□□ 1.12
PHRF1-204ENST00000532550 NSFL1CQ9UNZ2 370 aaKnown RBP22.02■■□□□ 1.12
PHRF1-204ENST00000532550 CWF19L2Q2TBE0 894 aaKnown RBP22.01■■□□□ 1.11
PHRF1-204ENST00000532550 TAF1DQ9H5J8 278 aaPredicted RBP22.01■■□□□ 1.11
PHRF1-204ENST00000532550 SCN4AP35499 1836 aa22.01■■□□□ 1.11
PHRF1-204ENST00000532550 NEURL1BA8MQ27 555 aa22■■□□□ 1.11
PHRF1-204ENST00000532550 CHADLQ6NUI6 762 aa22■■□□□ 1.11
PHRF1-204ENST00000532550 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
PHRF1-204ENST00000532550 ZNRF3Q9ULT6 936 aa22■■□□□ 1.11
PHRF1-204ENST00000532550 CDHR2Q9BYE9 1310 aa22■■□□□ 1.11
PHRF1-204ENST00000532550 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
PHRF1-204ENST00000532550 CCDC85AQ96PX6 553 aaPredicted RBP21.99■■□□□ 1.11
PHRF1-204ENST00000532550 SEC31BQ9NQW1 1179 aa21.99■■□□□ 1.11
PHRF1-204ENST00000532550 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
PHRF1-204ENST00000532550 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
PHRF1-204ENST00000532550 EPHX2P34913 555 aa21.98■■□□□ 1.11
PHRF1-204ENST00000532550 EAPPQ56P03 285 aaPredicted RBP21.98■■□□□ 1.11
PHRF1-204ENST00000532550 PNMA8AQ86V59 439 aaPredicted RBP21.98■■□□□ 1.11
PHRF1-204ENST00000532550 C6orf229H3BNL8 230 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 H7C1W4 665 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 POTEIP0CG38 1075 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 POTEJP0CG39 1038 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 LMOD1P29536 600 aaPredicted RBP21.97■■□□□ 1.11
PHRF1-204ENST00000532550 WASHC4Q2M389 1173 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 LDHDQ86WU2 507 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 LINS1Q8NG48 757 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 CLEC11AQ9Y240 323 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 COL4A5P29400 1685 aa21.97■■□□□ 1.11
PHRF1-204ENST00000532550 GPSM2P81274 684 aa21.96■■□□□ 1.11
PHRF1-204ENST00000532550 GCKRQ14397 625 aa21.96■■□□□ 1.11
PHRF1-204ENST00000532550 UBE3BQ7Z3V4 1068 aa21.96■■□□□ 1.11
PHRF1-204ENST00000532550 CTSWP56202 376 aa21.95■■□□□ 1.1
PHRF1-204ENST00000532550 HTRA3P83110 453 aa21.95■■□□□ 1.1
PHRF1-204ENST00000532550 ANKRD18AQ8IVF6 992 aa21.95■■□□□ 1.1
PHRF1-204ENST00000532550 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
PHRF1-204ENST00000532550 TTLL11Q8NHH1 800 aa21.95■■□□□ 1.1
PHRF1-204ENST00000532550 E9PSI1 815 aa21.94■■□□□ 1.1
PHRF1-204ENST00000532550 RIMBP2O15034 1052 aa21.94■■□□□ 1.1
PHRF1-204ENST00000532550 CXCL9Q07325 125 aa21.94■■□□□ 1.1
PHRF1-204ENST00000532550 CDC5LQ99459 802 aaKnown RBP21.94■■□□□ 1.1
PHRF1-204ENST00000532550 EYA3Q99504 573 aa21.94■■□□□ 1.1
PHRF1-204ENST00000532550 ANKIB1Q9P2G1 1089 aa21.94■■□□□ 1.1
PHRF1-204ENST00000532550 POLLQ9UGP5 575 aa21.94■■□□□ 1.1
PHRF1-204ENST00000532550 TNIP1Q15025 636 aa21.93■■□□□ 1.1
PHRF1-204ENST00000532550 CIAPIN1Q6FI81 312 aa21.93■■□□□ 1.1
PHRF1-204ENST00000532550 F6X3S4 739 aa21.92■■□□□ 1.1
PHRF1-204ENST00000532550 TBC1D16Q8TBP0 767 aa21.92■■□□□ 1.1
PHRF1-204ENST00000532550 ZC3H12CQ9C0D7 883 aaKnown RBP21.92■■□□□ 1.1
PHRF1-204ENST00000532550 PODXL2Q9NZ53 605 aa21.92■■□□□ 1.1
PHRF1-204ENST00000532550 LRRC37AA6NMS7 1700 aa21.92■■□□□ 1.1
PHRF1-204ENST00000532550 RAD17O75943 681 aa21.91■■□□□ 1.1
PHRF1-204ENST00000532550 EPS15P42566 896 aa21.91■■□□□ 1.1
PHRF1-204ENST00000532550 SCNN1DP51172 638 aa21.91■■□□□ 1.1
PHRF1-204ENST00000532550 GREM2Q9H772 168 aa21.91■■□□□ 1.1
PHRF1-204ENST00000532550 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
PHRF1-204ENST00000532550 BEND3Q5T5X7 828 aa21.9■■□□□ 1.1
PHRF1-204ENST00000532550 PLA2G12BQ9BX93 195 aa21.9■■□□□ 1.1
PHRF1-204ENST00000532550 BCL2L13Q9BXK5 485 aa21.9■■□□□ 1.1
PHRF1-204ENST00000532550 GGA1Q9UJY5 639 aa21.9■■□□□ 1.1
PHRF1-204ENST00000532550 COL4A1P02462 1669 aa21.89■■□□□ 1.1
PHRF1-204ENST00000532550 MYH3P11055 1940 aa21.89■■□□□ 1.09
PHRF1-204ENST00000532550 G3V3G9 751 aa21.89■■□□□ 1.09
PHRF1-204ENST00000532550 DCAF8Q5TAQ9 597 aa21.89■■□□□ 1.09
PHRF1-204ENST00000532550 KLRG1Q96E93 195 aa21.89■■□□□ 1.09
PHRF1-204ENST00000532550 DBNDD1Q9H9R9 158 aa21.89■■□□□ 1.09
PHRF1-204ENST00000532550 YDJCA8MPS7 323 aa21.88■■□□□ 1.09
PHRF1-204ENST00000532550 UFL1O94874 794 aa21.88■■□□□ 1.09
PHRF1-204ENST00000532550 GMPSP49915 693 aaPredicted RBP21.88■■□□□ 1.09
PHRF1-204ENST00000532550 CASP7P55210 303 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms