RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
TRIM53AP-201ENST00000532014 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
TRIM53AP-201ENST00000532014 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.53
TRIM53AP-201ENST00000532014 ST5P78524 1137 aa11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 C9orf78Q9NZ63 289 aaPredicted RBP11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 CHRNA5P30532 468 aa11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 ANKRD44Q8N8A2 993 aa11.7□□□□□ -0.54
TRIM53AP-201ENST00000532014 A0A1B0GUL6 1792 aa11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 CENPBP07199 599 aaPredicted RBP11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 TTLL11Q8NHH1 800 aa11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 CD2APQ9Y5K6 639 aa11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 LRRFIP2Q9Y608 721 aaKnown RBP11.69□□□□□ -0.54
TRIM53AP-201ENST00000532014 PDE8AO60658 829 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 CSF1RP07333 972 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 SRGNP10124 158 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 MS4A1P11836 297 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 CTSWP56202 376 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 SYT17Q9BSW7 474 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 PPP1R1BQ9UD71 204 aaPredicted RBP11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
TRIM53AP-201ENST00000532014 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 NPHP1O15259 732 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 UBTFL1P0CB47 393 aaPredicted RBP11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 DPEP1P16444 411 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 CCDC85AQ96PX6 553 aaPredicted RBP11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 GREM2Q9H772 168 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
TRIM53AP-201ENST00000532014 GNAI3P08754 354 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 PDE6BP35913 854 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 TGFB2P61812 414 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 RTL9Q8NET4 1388 aa11.66□□□□□ -0.54
TRIM53AP-201ENST00000532014 LMBR1LQ6UX01 489 aa11.65□□□□□ -0.54
TRIM53AP-201ENST00000532014 C2CD5Q86YS7 1000 aa11.65□□□□□ -0.54
TRIM53AP-201ENST00000532014 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
TRIM53AP-201ENST00000532014 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
TRIM53AP-201ENST00000532014 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
TRIM53AP-201ENST00000532014 PNMA6EA0A0J9YXQ4 647 aa11.65□□□□□ -0.55
TRIM53AP-201ENST00000532014 GNAI2P04899 355 aa11.65□□□□□ -0.55
TRIM53AP-201ENST00000532014 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.55
TRIM53AP-201ENST00000532014 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.55
TRIM53AP-201ENST00000532014 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.55
TRIM53AP-201ENST00000532014 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.55
TRIM53AP-201ENST00000532014 H0YIN7 160 aa11.64□□□□□ -0.55
TRIM53AP-201ENST00000532014 NPR1P16066 1061 aa11.64□□□□□ -0.55
TRIM53AP-201ENST00000532014 MTX1Q13505 466 aa11.64□□□□□ -0.55
TRIM53AP-201ENST00000532014 CEP85Q6P2H3 762 aa11.64□□□□□ -0.55
TRIM53AP-201ENST00000532014 MASTLQ96GX5 879 aa11.64□□□□□ -0.55
TRIM53AP-201ENST00000532014 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 ITGA6P23229 1130 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 OLFM4Q6UX06 510 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 ZNF594Q96JF6 807 aaPredicted RBP11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
TRIM53AP-201ENST00000532014 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
TRIM53AP-201ENST00000532014 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
TRIM53AP-201ENST00000532014 RPGRQ92834 1020 aaKnown RBP11.62□□□□□ -0.55
TRIM53AP-201ENST00000532014 ZNF622Q969S3 477 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRIM53AP-201ENST00000532014 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
TRIM53AP-201ENST00000532014 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
TRIM53AP-201ENST00000532014 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
TRIM53AP-201ENST00000532014 GRAPQ13588 217 aa11.61□□□□□ -0.55
TRIM53AP-201ENST00000532014 POLA2Q14181 598 aa11.61□□□□□ -0.55
TRIM53AP-201ENST00000532014 GRAPLQ8TC17 118 aaPredicted RBP11.61□□□□□ -0.55
TRIM53AP-201ENST00000532014 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
TRIM53AP-201ENST00000532014 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 SSH3Q8TE77 659 aa11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 PIM2Q9P1W9 311 aa11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 PA2G4Q9UQ80 394 aaKnown RBP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 CHMP3Q9Y3E7 222 aa11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 ATP8B2P98198 1209 aa11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 PUS3Q9BZE2 481 aaKnown RBP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.6□□□□□ -0.55
TRIM53AP-201ENST00000532014 ANKRD18BA2A2Z9 1011 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms