RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 CNTNAP1P78357 1384 aa23.88■■□□□ 1.41
PUF60-218ENST00000531995 ABCC4O15439 1325 aa23.87■■□□□ 1.41
PUF60-218ENST00000531995 CC2D2BQ6DHV5 1058 aa23.87■■□□□ 1.41
PUF60-218ENST00000531995 LARGE2Q8N3Y3 721 aa23.87■■□□□ 1.41
PUF60-218ENST00000531995 HYPKQ9NX55 129 aa23.87■■□□□ 1.41
PUF60-218ENST00000531995 CAPN15O75808 1086 aa23.86■■□□□ 1.41
PUF60-218ENST00000531995 EIF6P56537 245 aaKnown RBP23.86■■□□□ 1.41
PUF60-218ENST00000531995 MAP1SQ66K74 1059 aaPredicted RBP23.86■■□□□ 1.41
PUF60-218ENST00000531995 NLRP3Q96P20 1036 aa23.86■■□□□ 1.41
PUF60-218ENST00000531995 LRRC37AA6NMS7 1700 aa23.85■■□□□ 1.41
PUF60-218ENST00000531995 G2E3Q7L622 706 aa23.85■■□□□ 1.41
PUF60-218ENST00000531995 TNS4Q8IZW8 715 aa23.85■■□□□ 1.41
PUF60-218ENST00000531995 ITGBL1O95965 494 aaPredicted RBP23.84■■□□□ 1.41
PUF60-218ENST00000531995 SLC4A2P04920 1241 aa23.84■■□□□ 1.41
PUF60-218ENST00000531995 AOC3Q16853 763 aa23.84■■□□□ 1.41
PUF60-218ENST00000531995 CHMP4AQ9BY43 222 aa23.84■■□□□ 1.41
PUF60-218ENST00000531995 PPIP5K2O43314 1243 aa23.83■■□□□ 1.41
PUF60-218ENST00000531995 HCLS1P14317 486 aaPredicted RBP23.83■■□□□ 1.41
PUF60-218ENST00000531995 PNMA8AQ86V59 439 aaPredicted RBP23.83■■□□□ 1.41
PUF60-218ENST00000531995 NLRP10Q86W26 655 aa23.83■■□□□ 1.41
PUF60-218ENST00000531995 NIM1KQ8IY84 436 aa23.83■■□□□ 1.41
PUF60-218ENST00000531995 DUOX1Q9NRD9 1551 aa23.82■■□□□ 1.4
PUF60-218ENST00000531995 TMEM88BA6NKF7 163 aa23.82■■□□□ 1.4
PUF60-218ENST00000531995 LMOD1P29536 600 aaPredicted RBP23.82■■□□□ 1.4
PUF60-218ENST00000531995 COL4A1P02462 1669 aa23.81■■□□□ 1.4
PUF60-218ENST00000531995 SCNN1DP51172 638 aa23.81■■□□□ 1.4
PUF60-218ENST00000531995 HSP90AB3PQ58FF7 597 aa23.81■■□□□ 1.4
PUF60-218ENST00000531995 STK31Q9BXU1 1019 aa23.81■■□□□ 1.4
PUF60-218ENST00000531995 ATP6V0A2Q9Y487 856 aa23.81■■□□□ 1.4
PUF60-218ENST00000531995 GRIPAP1Q4V328 841 aa23.8■■□□□ 1.4
PUF60-218ENST00000531995 SLC10A5Q5PT55 438 aa23.8■■□□□ 1.4
PUF60-218ENST00000531995 CNTROBQ8N137 903 aa23.8■■□□□ 1.4
PUF60-218ENST00000531995 TRPM7Q96QT4 1865 aa23.8■■□□□ 1.4
PUF60-218ENST00000531995 TMX4Q9H1E5 349 aaPredicted RBP23.8■■□□□ 1.4
PUF60-218ENST00000531995 TRMT112Q9UI30 125 aaKnown RBP23.8■■□□□ 1.4
PUF60-218ENST00000531995 EPS15P42566 896 aa23.79■■□□□ 1.4
PUF60-218ENST00000531995 ANKRD13DQ6ZTN6 518 aa23.79■■□□□ 1.4
PUF60-218ENST00000531995 PLBD2Q8NHP8 589 aa23.79■■□□□ 1.4
PUF60-218ENST00000531995 SSH1Q8WYL5 1049 aa23.79■■□□□ 1.4
PUF60-218ENST00000531995 SH3TC1Q8TE82 1336 aa23.79■■□□□ 1.4
PUF60-218ENST00000531995 CACNA1FO60840 1977 aa23.78■■□□□ 1.4
PUF60-218ENST00000531995 VEGFBP49765 207 aa23.78■■□□□ 1.4
PUF60-218ENST00000531995 TCIRG1Q13488 830 aa23.78■■□□□ 1.4
PUF60-218ENST00000531995 MRPL50Q8N5N7 158 aaKnown RBP23.78■■□□□ 1.4
PUF60-218ENST00000531995 CT47B1P0C2W7 299 aaPredicted RBP23.77■■□□□ 1.4
PUF60-218ENST00000531995 FMR1Q06787 632 aaKnown RBP eCLIP23.76■■□□□ 1.39
PUF60-218ENST00000531995 DPP8Q6V1X1 898 aaPredicted RBP23.76■■□□□ 1.39
PUF60-218ENST00000531995 YTHDC1Q96MU7 727 aaKnown RBP23.76■■□□□ 1.39
PUF60-218ENST00000531995 THSD7BQ9C0I4 1608 aa23.76■■□□□ 1.39
PUF60-218ENST00000531995 FOXN1O15353 648 aa23.75■■□□□ 1.39
PUF60-218ENST00000531995 FLIIQ13045 1269 aa23.75■■□□□ 1.39
PUF60-218ENST00000531995 DDX46Q7L014 1031 aaKnown RBP23.75■■□□□ 1.39
PUF60-218ENST00000531995 RARSP54136 660 aaKnown RBP23.74■■□□□ 1.39
PUF60-218ENST00000531995 GRAPQ13588 217 aa23.74■■□□□ 1.39
PUF60-218ENST00000531995 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
PUF60-218ENST00000531995 GRAPLQ8TC17 118 aaPredicted RBP23.74■■□□□ 1.39
PUF60-218ENST00000531995 ABT1Q9ULW3 272 aaKnown RBP23.74■■□□□ 1.39
PUF60-218ENST00000531995 PI4KAP2A4QPH2 592 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 ATP5J2-PTCD1G3V325 749 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 KSR2Q6VAB6 950 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 MPNDQ8N594 471 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 PI4KAP1Q8N8J0 262 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 SUPT20HQ8NEM7 779 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 BCL2L13Q9BXK5 485 aa23.73■■□□□ 1.39
PUF60-218ENST00000531995 RTFDC1Q9BY42 306 aaPredicted RBP23.73■■□□□ 1.39
PUF60-218ENST00000531995 RTL5Q5HYW3 569 aaPredicted RBP23.72■■□□□ 1.39
PUF60-218ENST00000531995 RIC3Q7Z5B4 369 aa23.72■■□□□ 1.39
PUF60-218ENST00000531995 SP8Q8IXZ3 490 aa23.72■■□□□ 1.39
PUF60-218ENST00000531995 ISCA1Q9BUE6 129 aa23.72■■□□□ 1.39
PUF60-218ENST00000531995 ZNRF3Q9ULT6 936 aa23.72■■□□□ 1.39
PUF60-218ENST00000531995 RASSF10A6NK89 507 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 TRAF5O00463 557 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 BBOX1O75936 387 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 GMPSP49915 693 aaPredicted RBP23.71■■□□□ 1.39
PUF60-218ENST00000531995 CXCL9Q07325 125 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 FAM89AQ96GI7 184 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 GPRC5DQ9NZD1 345 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 MAP3K2Q9Y2U5 619 aa23.71■■□□□ 1.39
PUF60-218ENST00000531995 BRPF1P55201 1214 aaPredicted RBP23.7■■□□□ 1.38
PUF60-218ENST00000531995 KIAA2012Q0VF49 1180 aa23.7■■□□□ 1.38
PUF60-218ENST00000531995 USP50Q70EL3 339 aaPredicted RBP23.7■■□□□ 1.38
PUF60-218ENST00000531995 AIDAQ96BJ3 306 aa23.7■■□□□ 1.38
PUF60-218ENST00000531995 METTL22Q9BUU2 404 aaPredicted RBP23.7■■□□□ 1.38
PUF60-218ENST00000531995 RAD17O75943 681 aa23.69■■□□□ 1.38
PUF60-218ENST00000531995 DDX58O95786 925 aaKnown RBP23.69■■□□□ 1.38
PUF60-218ENST00000531995 TRIM28Q13263 835 aaKnown RBP23.68■■□□□ 1.38
PUF60-218ENST00000531995 FKBP5Q13451 457 aaPredicted RBP23.68■■□□□ 1.38
PUF60-218ENST00000531995 DEFB115Q30KQ5 88 aa23.68■■□□□ 1.38
PUF60-218ENST00000531995 PAXIP1Q6ZW49 1069 aaPredicted RBP23.68■■□□□ 1.38
PUF60-218ENST00000531995 CELF1Q92879 486 aaKnown RBP23.68■■□□□ 1.38
PUF60-218ENST00000531995 VPS33BQ9H267 617 aa23.68■■□□□ 1.38
PUF60-218ENST00000531995 ADARB2Q9NS39 739 aaKnown RBP23.68■■□□□ 1.38
PUF60-218ENST00000531995 SMC4Q9NTJ3 1288 aa23.68■■□□□ 1.38
PUF60-218ENST00000531995 BCAR3O75815 825 aa23.67■■□□□ 1.38
PUF60-218ENST00000531995 IGKV5-2P06315 115 aa23.67■■□□□ 1.38
PUF60-218ENST00000531995 GRM1Q13255 1194 aa23.67■■□□□ 1.38
PUF60-218ENST00000531995 CIAPIN1Q6FI81 312 aa23.67■■□□□ 1.38
PUF60-218ENST00000531995 MYD88Q99836 296 aa23.67■■□□□ 1.38
PUF60-218ENST00000531995 SPEF2Q9C093 1822 aa23.66■■□□□ 1.38
PUF60-218ENST00000531995 WDR33Q9C0J8 1336 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms