RNA–Protein interactions for RNA: ENST00000531897.5

PUF60-216, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-216ENST00000531897 CACNA1SQ13698 1873 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 UTYO14607 1347 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 BBOX1O75936 387 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 MS4A1P11836 297 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 GRAPQ13588 217 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 CC2D2BQ6DHV5 1058 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 FTSJ3Q8IY81 847 aaKnown RBP28.29■■■□□ 2.12
PUF60-216ENST00000531897 GRAPLQ8TC17 118 aaPredicted RBP28.29■■■□□ 2.12
PUF60-216ENST00000531897 HDAC5Q9UQL6 1122 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 SLX4Q8IY92 1834 aa28.29■■■□□ 2.12
PUF60-216ENST00000531897 PPEF1O14829 653 aaPredicted RBP28.28■■■□□ 2.12
PUF60-216ENST00000531897 GRIPAP1Q4V328 841 aa28.28■■■□□ 2.12
PUF60-216ENST00000531897 INTS3Q68E01 1043 aaKnown RBP28.28■■■□□ 2.12
PUF60-216ENST00000531897 ARHGAP27Q6ZUM4 889 aa28.28■■■□□ 2.12
PUF60-216ENST00000531897 RTL9Q8NET4 1388 aa28.27■■■□□ 2.12
PUF60-216ENST00000531897 C21orf2O43822 256 aa28.27■■■□□ 2.12
PUF60-216ENST00000531897 CCDC93Q567U6 631 aa28.27■■■□□ 2.12
PUF60-216ENST00000531897 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.26■■■□□ 2.11
PUF60-216ENST00000531897 TTLL11Q8NHH1 800 aa28.25■■■□□ 2.11
PUF60-216ENST00000531897 CDC5LQ99459 802 aaKnown RBP28.25■■■□□ 2.11
PUF60-216ENST00000531897 ZNF219Q9P2Y4 722 aaPredicted RBP28.25■■■□□ 2.11
PUF60-216ENST00000531897 DZIP1LQ8IYY4 767 aaKnown RBP28.24■■■□□ 2.11
PUF60-216ENST00000531897 RTKN2Q8IZC4 609 aa28.24■■■□□ 2.11
PUF60-216ENST00000531897 C7orf43Q8WVR3 580 aa28.24■■■□□ 2.11
PUF60-216ENST00000531897 NBPF7P0C2Y1 421 aaPredicted RBP28.23■■■□□ 2.11
PUF60-216ENST00000531897 CLUAP1Q96AJ1 413 aa28.23■■■□□ 2.11
PUF60-216ENST00000531897 USP44Q9H0E7 712 aa28.23■■■□□ 2.11
PUF60-216ENST00000531897 CSF1RP07333 972 aa28.22■■■□□ 2.11
PUF60-216ENST00000531897 UBTFL1P0CB47 393 aaPredicted RBP28.22■■■□□ 2.11
PUF60-216ENST00000531897 ATP6V0A2Q9Y487 856 aa28.22■■■□□ 2.11
PUF60-216ENST00000531897 RPS8P62241 208 aaKnown RBP28.21■■■□□ 2.11
PUF60-216ENST00000531897 CHD4Q14839 1912 aa28.21■■■□□ 2.11
PUF60-216ENST00000531897 LTBP3Q9NS15 1303 aa28.2■■■□□ 2.11
PUF60-216ENST00000531897 GNAI3P08754 354 aa28.2■■■□□ 2.1
PUF60-216ENST00000531897 FOXO4P98177 505 aa28.2■■■□□ 2.1
PUF60-216ENST00000531897 ANKRD18AQ8IVF6 992 aa28.2■■■□□ 2.1
PUF60-216ENST00000531897 SP8Q8IXZ3 490 aa28.2■■■□□ 2.1
PUF60-216ENST00000531897 CCDC85AQ96PX6 553 aaPredicted RBP28.2■■■□□ 2.1
PUF60-216ENST00000531897 TAOK3Q9H2K8 898 aa28.2■■■□□ 2.1
PUF60-216ENST00000531897 GREM2Q9H772 168 aa28.2■■■□□ 2.1
PUF60-216ENST00000531897 CELF1Q92879 486 aaKnown RBP28.19■■■□□ 2.1
PUF60-216ENST00000531897 SUCLG2Q96I99 432 aa28.19■■■□□ 2.1
PUF60-216ENST00000531897 SEC31BQ9NQW1 1179 aa28.18■■■□□ 2.1
PUF60-216ENST00000531897 CHMP3Q9Y3E7 222 aa28.18■■■□□ 2.1
PUF60-216ENST00000531897 FER1L6Q2WGJ9 1857 aa28.17■■■□□ 2.1
PUF60-216ENST00000531897 ANKRD18BA2A2Z9 1011 aa28.17■■■□□ 2.1
PUF60-216ENST00000531897 ITGA6P23229 1130 aa28.17■■■□□ 2.1
PUF60-216ENST00000531897 IGHMBP2P38935 993 aaKnown RBP28.17■■■□□ 2.1
PUF60-216ENST00000531897 IFIT5Q13325 482 aaKnown RBP28.17■■■□□ 2.1
PUF60-216ENST00000531897 FAM161AQ3B820 660 aa28.17■■■□□ 2.1
PUF60-216ENST00000531897 LMBR1LQ6UX01 489 aa28.17■■■□□ 2.1
PUF60-216ENST00000531897 TMEM57Q8N5G2 664 aa28.17■■■□□ 2.1
PUF60-216ENST00000531897 FKBP4Q02790 459 aaKnown RBP eCLIP28.16■■■□□ 2.14e-12■■■■□ 23.5
PUF60-216ENST00000531897 CCDC57Q2TAC2 916 aa28.16■■■□□ 2.1
PUF60-216ENST00000531897 TNNQ9UQP3 1299 aa28.16■■■□□ 2.1
PUF60-216ENST00000531897 NFKBIEO00221 500 aa28.15■■■□□ 2.1
PUF60-216ENST00000531897 RABL6Q3YEC7 729 aaPredicted RBP28.15■■■□□ 2.1
PUF60-216ENST00000531897 ITPRIPQ8IWB1 547 aa28.15■■■□□ 2.1
PUF60-216ENST00000531897 PSMD1Q99460 953 aa28.15■■■□□ 2.1
PUF60-216ENST00000531897 BICC1Q9H694 974 aaKnown RBP28.15■■■□□ 2.1
PUF60-216ENST00000531897 UTRNP46939 3433 aa28.15■■■□□ 2.1
PUF60-216ENST00000531897 LRRC37AA6NMS7 1700 aa28.15■■■□□ 2.1
PUF60-216ENST00000531897 LMNB1P20700 586 aa28.14■■■□□ 2.1
PUF60-216ENST00000531897 EPHA10Q5JZY3 1008 aa28.14■■■□□ 2.1
PUF60-216ENST00000531897 SUPT20HQ8NEM7 779 aa28.14■■■□□ 2.1
PUF60-216ENST00000531897 RASSF7Q02833 373 aa28.13■■■□□ 2.09
PUF60-216ENST00000531897 TAF7LQ5H9L4 462 aa28.13■■■□□ 2.09
PUF60-216ENST00000531897 KAZALD1Q96I82 304 aa28.13■■■□□ 2.09
PUF60-216ENST00000531897 MEIS3Q99687 375 aa28.13■■■□□ 2.09
PUF60-216ENST00000531897 TAF1P21675 1872 aa28.12■■■□□ 2.09
PUF60-216ENST00000531897 SNED1Q8TER0 1413 aa28.12■■■□□ 2.09
PUF60-216ENST00000531897 OLFM4Q6UX06 510 aa28.12■■■□□ 2.09
PUF60-216ENST00000531897 DPP8Q6V1X1 898 aaPredicted RBP28.12■■■□□ 2.09
PUF60-216ENST00000531897 MPNDQ8N594 471 aa28.12■■■□□ 2.09
PUF60-216ENST00000531897 MPHOSPH8Q99549 860 aa28.12■■■□□ 2.09
PUF60-216ENST00000531897 BSDC1Q9NW68 430 aaPredicted RBP28.12■■■□□ 2.09
PUF60-216ENST00000531897 PDE3AQ14432 1141 aa28.11■■■□□ 2.09
PUF60-216ENST00000531897 CHMP4BQ9H444 224 aaKnown RBP28.11■■■□□ 2.09
PUF60-216ENST00000531897 RLBP1P12271 317 aa28.1■■■□□ 2.09
PUF60-216ENST00000531897 ANKRD44Q8N8A2 993 aa28.1■■■□□ 2.09
PUF60-216ENST00000531897 RNF181Q9P0P0 153 aa28.1■■■□□ 2.09
PUF60-216ENST00000531897 GNAI2P04899 355 aa28.09■■■□□ 2.09
PUF60-216ENST00000531897 C9orf131Q5VYM1 1079 aa28.09■■■□□ 2.09
PUF60-216ENST00000531897 VPS33BQ9H267 617 aa28.09■■■□□ 2.09
PUF60-216ENST00000531897 LRRFIP2Q9Y608 721 aaKnown RBP28.09■■■□□ 2.09
PUF60-216ENST00000531897 ZC3H4Q9UPT8 1303 aaKnown RBP28.09■■■□□ 2.09
PUF60-216ENST00000531897 PANK1Q8TE04 598 aa28.08■■■□□ 2.09
PUF60-216ENST00000531897 COL4A1P02462 1669 aa28.07■■■□□ 2.08
PUF60-216ENST00000531897 SBF1O95248 1867 aa28.07■■■□□ 2.08
PUF60-216ENST00000531897 PLIN1O60240 522 aa28.07■■■□□ 2.08
PUF60-216ENST00000531897 RTFDC1Q9BY42 306 aaPredicted RBP28.07■■■□□ 2.08
PUF60-216ENST00000531897 ANKIB1Q9P2G1 1089 aa28.07■■■□□ 2.08
PUF60-216ENST00000531897 DDX19BQ9UMR2 479 aa28.07■■■□□ 2.08
PUF60-216ENST00000531897 NSFL1CQ9UNZ2 370 aaKnown RBP28.07■■■□□ 2.08
PUF60-216ENST00000531897 YY1P25490 414 aa28.06■■■□□ 2.08
PUF60-216ENST00000531897 MVPQ14764 893 aaKnown RBP28.06■■■□□ 2.08
PUF60-216ENST00000531897 PODXL2Q9NZ53 605 aa28.06■■■□□ 2.08
PUF60-216ENST00000531897 XDHP47989 1333 aa28.06■■■□□ 2.08
PUF60-216ENST00000531897 IARSP41252 1262 aaKnown RBP28.05■■■□□ 2.08
PUF60-216ENST00000531897 SPEF2Q9C093 1822 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms