RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 LCE3BQ5TA77 95 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
CASP4-210ENST00000531546 TTC9Q92623 222 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 HINFPQ9BQA5 517 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 BCS1LQ9Y276 419 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 NOS3P29474 1203 aa9.98□□□□□ -0.81
CASP4-210ENST00000531546 INPP5BP32019 993 aa9.98□□□□□ -0.81
CASP4-210ENST00000531546 ARSDP51689 593 aa9.98□□□□□ -0.81
CASP4-210ENST00000531546 GPLD1P80108 840 aa9.98□□□□□ -0.81
CASP4-210ENST00000531546 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
CASP4-210ENST00000531546 RARAP10276 462 aa9.97□□□□□ -0.81
CASP4-210ENST00000531546 KRT25Q7Z3Z0 450 aa9.96□□□□□ -0.82
CASP4-210ENST00000531546 MAFBQ9Y5Q3 323 aaPredicted RBP9.96□□□□□ -0.82
CASP4-210ENST00000531546 SHROOM4Q9ULL8 1493 aa9.96□□□□□ -0.82
CASP4-210ENST00000531546 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
CASP4-210ENST00000531546 PRR23CQ6ZRP0 262 aa9.95□□□□□ -0.82
CASP4-210ENST00000531546 ZFATQ9P243 1243 aa9.95□□□□□ -0.82
CASP4-210ENST00000531546 ZBTB42B2RXF5 422 aa9.94□□□□□ -0.82
CASP4-210ENST00000531546 SLC51AQ86UW1 340 aa9.94□□□□□ -0.82
CASP4-210ENST00000531546 DCAF11Q8TEB1 546 aa9.94□□□□□ -0.82
CASP4-210ENST00000531546 MEGF10Q96KG7 1140 aa9.94□□□□□ -0.82
CASP4-210ENST00000531546 KLK14Q9P0G3 267 aa9.94□□□□□ -0.82
CASP4-210ENST00000531546 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
CASP4-210ENST00000531546 NRLP54845 237 aa9.93□□□□□ -0.82
CASP4-210ENST00000531546 MLLT1Q03111 559 aaPredicted RBP9.93□□□□□ -0.82
CASP4-210ENST00000531546 DGKZQ13574 1117 aa9.93□□□□□ -0.82
CASP4-210ENST00000531546 GLMNQ92990 594 aa9.93□□□□□ -0.82
CASP4-210ENST00000531546 IFT43Q96FT9 208 aa9.93□□□□□ -0.82
CASP4-210ENST00000531546 SMG9Q9H0W8 520 aaKnown RBP9.93□□□□□ -0.82
CASP4-210ENST00000531546 EIF2AK2P19525 551 aaKnown RBP9.92□□□□□ -0.82
CASP4-210ENST00000531546 TARSP26639 723 aaKnown RBP9.92□□□□□ -0.82
CASP4-210ENST00000531546 DPYDQ12882 1025 aa9.92□□□□□ -0.82
CASP4-210ENST00000531546 PTK7Q13308 1070 aa9.92□□□□□ -0.82
CASP4-210ENST00000531546 SRA1Q9HD15 236 aaKnown RBP9.92□□□□□ -0.82
CASP4-210ENST00000531546 FOXO3O43524 673 aa9.91□□□□□ -0.82
CASP4-210ENST00000531546 PLAURQ03405 335 aa9.91□□□□□ -0.82
CASP4-210ENST00000531546 CRTC2Q53ET0 693 aaPredicted RBP9.91□□□□□ -0.82
CASP4-210ENST00000531546 VTI1AQ96AJ9 217 aa9.91□□□□□ -0.82
CASP4-210ENST00000531546 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
CASP4-210ENST00000531546 AKTIPQ9H8T0 292 aa9.91□□□□□ -0.82
CASP4-210ENST00000531546 FAM196BA6NMK8 535 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L15C9J2P7 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L13C9JLJ4 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L12C9JPN9 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L11C9JVI0 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L21D6R901 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L18D6R9N7 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L22D6RA61 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L17D6RBQ6 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L19D6RCP7 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L20D6RJB6 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 DLL1O00548 723 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
CASP4-210ENST00000531546 SASH3O75995 380 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 MICAL2O94851 1124 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
CASP4-210ENST00000531546 USP17L24Q0WX57 530 aa9.9□□□□□ -0.82
CASP4-210ENST00000531546 DZIP1LQ8IYY4 767 aaKnown RBP9.9□□□□□ -0.82
CASP4-210ENST00000531546 QTRT2Q9H974 415 aaKnown RBP9.9□□□□□ -0.82
CASP4-210ENST00000531546 C11orf91Q3C1V1 193 aa9.89□□□□□ -0.83
CASP4-210ENST00000531546 MCTP1Q6DN14 999 aa9.89□□□□□ -0.83
CASP4-210ENST00000531546 ANKMY2Q8IV38 441 aa9.89□□□□□ -0.83
CASP4-210ENST00000531546 MYO19Q96H55 970 aa9.89□□□□□ -0.83
CASP4-210ENST00000531546 PCMTD2Q9NV79 361 aa9.89□□□□□ -0.83
CASP4-210ENST00000531546 FSTP19883 344 aa9.88□□□□□ -0.83
CASP4-210ENST00000531546 HFE2Q6ZVN8 426 aa9.88□□□□□ -0.83
CASP4-210ENST00000531546 MAP4K3Q8IVH8 894 aa9.88□□□□□ -0.83
CASP4-210ENST00000531546 RBSNQ9H1K0 784 aa9.88□□□□□ -0.83
CASP4-210ENST00000531546 TLR7Q9NYK1 1049 aaKnown RBP9.88□□□□□ -0.83
CASP4-210ENST00000531546 LGR5O75473 907 aa9.87□□□□□ -0.83
CASP4-210ENST00000531546 EGFRP00533 1210 aa9.87□□□□□ -0.83
CASP4-210ENST00000531546 TMEM130Q8N3G9 435 aa9.87□□□□□ -0.83
CASP4-210ENST00000531546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.83
CASP4-210ENST00000531546 SCRIBQ14160 1630 aa9.86□□□□□ -0.83
CASP4-210ENST00000531546 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
CASP4-210ENST00000531546 GHRHP01286 108 aa9.86□□□□□ -0.83
CASP4-210ENST00000531546 PSAPP07602 524 aa9.86□□□□□ -0.83
CASP4-210ENST00000531546 PROSER2Q86WR7 435 aaPredicted RBP9.86□□□□□ -0.83
CASP4-210ENST00000531546 PLD4Q96BZ4 506 aa9.86□□□□□ -0.83
CASP4-210ENST00000531546 GOLGA2P5Q9HBQ8 144 aa9.86□□□□□ -0.83
CASP4-210ENST00000531546 RTCBQ9Y3I0 505 aaKnown RBP9.86□□□□□ -0.83
CASP4-210ENST00000531546 F8W735 103 aaPredicted RBP9.85□□□□□ -0.83
CASP4-210ENST00000531546 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
CASP4-210ENST00000531546 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
CASP4-210ENST00000531546 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
CASP4-210ENST00000531546 GSC2O15499 205 aa9.84□□□□□ -0.83
CASP4-210ENST00000531546 XYLBO75191 536 aa9.84□□□□□ -0.83
CASP4-210ENST00000531546 WEE1P30291 646 aa9.84□□□□□ -0.83
CASP4-210ENST00000531546 SOX18P35713 384 aa9.84□□□□□ -0.83
CASP4-210ENST00000531546 CACTIN-AS1Q8N1I8 211 aa9.84□□□□□ -0.83
CASP4-210ENST00000531546 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
CASP4-210ENST00000531546 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
CASP4-210ENST00000531546 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
CASP4-210ENST00000531546 SIK1P57059 783 aa9.83□□□□□ -0.84
CASP4-210ENST00000531546 GDF6Q6KF10 455 aaPredicted RBP9.83□□□□□ -0.84
CASP4-210ENST00000531546 PAX4O43316 350 aa9.82□□□□□ -0.84
CASP4-210ENST00000531546 Q6ZS46 218 aa9.82□□□□□ -0.84
CASP4-210ENST00000531546 RGL4Q8IZJ4 473 aa9.82□□□□□ -0.84
CASP4-210ENST00000531546 FNBP4Q8N3X1 1017 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms