RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 EIF4G2P78344 907 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 TRIM32Q13049 653 aa9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 PTPRNQ16849 979 aa9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 PTCRAQ6ISU1 281 aaPredicted RBP9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 HDGFL2Q7Z4V5 671 aaPredicted RBP9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 TERF2IPQ9NYB0 399 aa9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 CD2APQ9Y5K6 639 aa9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 A0A1W2PP64 1363 aa9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 MON2Q7Z3U7 1717 aa9.69□□□□□ -0.86
TRIM53CP-201ENST00000531490 MEGF6O75095 1541 aa9.69□□□□□ -0.86
TRIM53CP-201ENST00000531490 MAP3K19Q56UN5 1328 aa9.69□□□□□ -0.86
TRIM53CP-201ENST00000531490 CCNYL3P0C7X3 344 aa9.69□□□□□ -0.86
TRIM53CP-201ENST00000531490 PKD2L1Q9P0L9 805 aa9.69□□□□□ -0.86
TRIM53CP-201ENST00000531490 IGSF1Q8N6C5 1336 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 HOXC9P31274 260 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 PRR20EP86478 221 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 PRR20CP86479 221 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 PRR20DP86480 221 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 PRR20BP86481 221 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 PRR20AP86496 221 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 RTL5Q5HYW3 569 aaPredicted RBP9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 LYPD8Q6UX82 237 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 PROCA1Q8NCQ7 364 aaPredicted RBP9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
TRIM53CP-201ENST00000531490 KAT6BQ8WYB5 2073 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 TNFRSF10AO00220 468 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 AMPHP49418 695 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 HTRA3P83110 453 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 FOXC1Q12948 553 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 EVA1BQ9NVM1 165 aa9.67□□□□□ -0.86
TRIM53CP-201ENST00000531490 FYB1O15117 783 aa9.66□□□□□ -0.86
TRIM53CP-201ENST00000531490 RRS1Q15050 365 aaKnown RBP9.66□□□□□ -0.86
TRIM53CP-201ENST00000531490 Q6ZNB5 142 aa9.66□□□□□ -0.86
TRIM53CP-201ENST00000531490 DNAJC5GQ8N7S2 189 aa9.66□□□□□ -0.86
TRIM53CP-201ENST00000531490 EDC4Q6P2E9 1401 aaKnown RBP9.66□□□□□ -0.86
TRIM53CP-201ENST00000531490 PALLDQ8WX93 1383 aa9.66□□□□□ -0.86
TRIM53CP-201ENST00000531490 CDCA8Q53HL2 280 aa9.65□□□□□ -0.86
TRIM53CP-201ENST00000531490 IL27Q8NEV9 243 aa9.65□□□□□ -0.86
TRIM53CP-201ENST00000531490 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRIM53CP-201ENST00000531490 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
TRIM53CP-201ENST00000531490 TUBGCP6Q96RT7 1819 aa9.65□□□□□ -0.86
TRIM53CP-201ENST00000531490 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.86
TRIM53CP-201ENST00000531490 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
TRIM53CP-201ENST00000531490 KCNH2Q12809 1159 aa9.64□□□□□ -0.87
TRIM53CP-201ENST00000531490 TSC1Q92574 1164 aa9.64□□□□□ -0.87
TRIM53CP-201ENST00000531490 PCNTO95613 3336 aa9.64□□□□□ -0.87
TRIM53CP-201ENST00000531490 CYP27B1O15528 508 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 SKOR1P84550 965 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 COL13A1Q5TAT6 717 aaPredicted RBP9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 FLAD1Q8NFF5 587 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 COG3Q96JB2 828 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 NMRK2Q9NPI5 230 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 PIGBQ92521 554 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 UNC93B1Q9H1C4 597 aa9.63□□□□□ -0.87
TRIM53CP-201ENST00000531490 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 DOT1LQ8TEK3 1739 aa9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 WNT7AO00755 349 aa9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 LCE2BO14633 110 aa9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 PANK3Q9H999 370 aa9.62□□□□□ -0.87
TRIM53CP-201ENST00000531490 LTN1O94822 1766 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 A0A0G2JLW4 131 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 TOMM70O94826 608 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 F12P00748 615 aaPredicted RBP9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 MMP10P09238 476 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 CTHP32929 405 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 WNT7BP56706 349 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 ITPK1Q13572 414 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 PPP2R2DQ66LE6 453 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 HELBQ8NG08 1087 aaPredicted RBP9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 MAP10Q9P2G4 905 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
TRIM53CP-201ENST00000531490 LY75O60449 1722 aa9.6□□□□□ -0.87
TRIM53CP-201ENST00000531490 USP54Q70EL1 1684 aa9.6□□□□□ -0.87
TRIM53CP-201ENST00000531490 RC3H1Q5TC82 1133 aaKnown RBP9.6□□□□□ -0.87
TRIM53CP-201ENST00000531490 ARHGAP27Q6ZUM4 889 aa9.6□□□□□ -0.87
TRIM53CP-201ENST00000531490 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
TRIM53CP-201ENST00000531490 KIF7Q2M1P5 1343 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 PCDH11XQ9BZA7 1347 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 PCDH11YQ9BZA8 1340 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 NSD3Q9BZ95 1437 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 LOC102724428A0A0B4J2F2 783 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 SIK1P57059 783 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 BAP1Q92560 729 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 ASAP1Q9ULH1 1129 aa9.59□□□□□ -0.87
TRIM53CP-201ENST00000531490 CGNL1Q0VF96 1302 aa9.58□□□□□ -0.88
TRIM53CP-201ENST00000531490 DPEP1P16444 411 aa9.58□□□□□ -0.88
TRIM53CP-201ENST00000531490 SSFA2P28290 1259 aa9.58□□□□□ -0.88
TRIM53CP-201ENST00000531490 SH3BP2P78314 561 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms