RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 MYH3P11055 1940 aa13.34□□□□□ -0.27
SRPRA-205ENST00000531104 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
SRPRA-205ENST00000531104 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 REC8O95072 547 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 NTSR2O95665 410 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 ATP5JP18859 108 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 LRRC24Q50LG9 513 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 IL17RAQ96F46 866 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
SRPRA-205ENST00000531104 CHMP3Q9Y3E7 222 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
SRPRA-205ENST00000531104 ZNF609O15014 1411 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
SRPRA-205ENST00000531104 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 SNX21Q969T3 373 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
SRPRA-205ENST00000531104 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
SRPRA-205ENST00000531104 BCL2L12Q9HB09 334 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
SRPRA-205ENST00000531104 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 SH3TC1Q8TE82 1336 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
SRPRA-205ENST00000531104 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 KCNQ4P56696 695 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 IFIT5Q13325 482 aaKnown RBP13.31□□□□□ -0.28
SRPRA-205ENST00000531104 BECN1Q14457 450 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
SRPRA-205ENST00000531104 KRT27Q7Z3Y8 459 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 TBC1D2Q9BYX2 928 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
SRPRA-205ENST00000531104 NARFQ9UHQ1 456 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 RIPOR2Q9Y4F9 1068 aa13.31□□□□□ -0.28
SRPRA-205ENST00000531104 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
SRPRA-205ENST00000531104 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
SRPRA-205ENST00000531104 DBNDD2Q9BQY9 259 aa13.3□□□□□ -0.28
SRPRA-205ENST00000531104 GREM2Q9H772 168 aa13.3□□□□□ -0.28
SRPRA-205ENST00000531104 SNRKQ9NRH2 765 aa13.3□□□□□ -0.28
SRPRA-205ENST00000531104 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRPRA-205ENST00000531104 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
SRPRA-205ENST00000531104 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
SRPRA-205ENST00000531104 SGSM2O43147 1006 aa13.29□□□□□ -0.28
SRPRA-205ENST00000531104 ITGA6P23229 1130 aa13.29□□□□□ -0.28
SRPRA-205ENST00000531104 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
SRPRA-205ENST00000531104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRPRA-205ENST00000531104 IL25Q9H293 177 aa13.29□□□□□ -0.28
SRPRA-205ENST00000531104 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
SRPRA-205ENST00000531104 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
SRPRA-205ENST00000531104 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 TICAM2Q86XR7 235 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 HAUS7Q99871 368 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
SRPRA-205ENST00000531104 HIP1O00291 1037 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 GNPATO15228 680 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 BOLA2Q9H3K6 86 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 AKAP2Q9Y2D5 859 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
SRPRA-205ENST00000531104 SPEF2Q9C093 1822 aa13.27□□□□□ -0.29
SRPRA-205ENST00000531104 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
SRPRA-205ENST00000531104 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
SRPRA-205ENST00000531104 TIMM10P62072 90 aa13.26□□□□□ -0.29
SRPRA-205ENST00000531104 RABEP1Q15276 862 aa13.26□□□□□ -0.29
SRPRA-205ENST00000531104 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
SRPRA-205ENST00000531104 TBC1D9BQ66K14 1250 aa13.26□□□□□ -0.29
SRPRA-205ENST00000531104 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
SRPRA-205ENST00000531104 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
SRPRA-205ENST00000531104 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
SRPRA-205ENST00000531104 LSG1Q9H089 658 aaKnown RBP13.26□□□□□ -0.29
SRPRA-205ENST00000531104 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
SRPRA-205ENST00000531104 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 RAD50Q92878 1312 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 ANAPC15P60006 121 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
SRPRA-205ENST00000531104 TAF7LQ5H9L4 462 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 SRP68Q9UHB9 627 aaKnown RBP13.25□□□□□ -0.29
SRPRA-205ENST00000531104 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
SRPRA-205ENST00000531104 FGFR2P21802 821 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 HSPA4P34932 840 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 CCDC152Q4G0S7 254 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 KCNB2Q92953 911 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
SRPRA-205ENST00000531104 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 MROH5Q6ZUA9 1318 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 ZPR1O75312 459 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 TRIM37O94972 964 aa13.23□□□□□ -0.29
SRPRA-205ENST00000531104 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms