RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 ERVV-1B6SEH8 477 aa12.57□□□□□ -0.4
RPUSD4-205ENST00000530903 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
RPUSD4-205ENST00000530903 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
RPUSD4-205ENST00000530903 ZBTB40Q9NUA8 1239 aa12.57□□□□□ -0.4
RPUSD4-205ENST00000530903 SRP68Q9UHB9 627 aaKnown RBP12.57□□□□□ -0.4
RPUSD4-205ENST00000530903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 GPTP24298 496 aa12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 TCIRG1Q13488 830 aa12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 TRAPPC3LQ5T215 181 aa12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
RPUSD4-205ENST00000530903 ZPR1O75312 459 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 SSFA2P28290 1259 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 RFC4P35249 363 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 GCKRQ14397 625 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 USPL1Q5W0Q7 1092 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-205ENST00000530903 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 GRM8O00222 908 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 GNAI3P08754 354 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 UBTFL1P0CB47 393 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 AAMPQ13685 434 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 PCDHB15Q9Y5E8 787 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 G3V3G9 751 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 CCDC136Q96JN2 1154 aa12.54□□□□□ -0.4
RPUSD4-205ENST00000530903 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 GNAI2P04899 355 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 NLRP10Q86W26 655 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 QSER1Q2KHR3 1735 aa12.53□□□□□ -0.4
RPUSD4-205ENST00000530903 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 UTYO14607 1347 aa12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 CLEC4GQ6UXB4 293 aa12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
RPUSD4-205ENST00000530903 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
RPUSD4-205ENST00000530903 SLC15A2Q16348 729 aa12.51□□□□□ -0.41
RPUSD4-205ENST00000530903 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
RPUSD4-205ENST00000530903 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
RPUSD4-205ENST00000530903 H7C1W4 665 aa12.5□□□□□ -0.41
RPUSD4-205ENST00000530903 GYS1P13807 737 aa12.5□□□□□ -0.41
RPUSD4-205ENST00000530903 CASP7P55210 303 aa12.5□□□□□ -0.41
RPUSD4-205ENST00000530903 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
RPUSD4-205ENST00000530903 CEP85Q6P2H3 762 aa12.5□□□□□ -0.41
RPUSD4-205ENST00000530903 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
RPUSD4-205ENST00000530903 RGL2O15211 777 aa12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 IGHDP01880 384 aa12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 SIRT2Q8IXJ6 389 aa12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
RPUSD4-205ENST00000530903 EPHA10Q5JZY3 1008 aa12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 ANKRD44Q8N8A2 993 aa12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 KAZALD1Q96I82 304 aa12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 DDX60Q8IY21 1712 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-205ENST00000530903 LAMB2P55268 1798 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 CASZ1Q86V15 1759 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 MYH3P11055 1940 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 NTSR2O95665 410 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 NFIXQ14938 502 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 PPP1R42Q7Z4L9 355 aa12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
RPUSD4-205ENST00000530903 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.41
RPUSD4-205ENST00000530903 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
RPUSD4-205ENST00000530903 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
RPUSD4-205ENST00000530903 NUTM1Q86Y26 1132 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms