RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 SMC3Q9UQE7 1217 aa18.61■□□□□ 0.57
USP35-206ENST00000530535 UBR2Q8IWV8 1755 aa18.61■□□□□ 0.57
USP35-206ENST00000530535 UVSSAQ2YD98 709 aa18.6■□□□□ 0.57
USP35-206ENST00000530535 RUFY2Q8WXA3 655 aa18.6■□□□□ 0.57
USP35-206ENST00000530535 GJD4Q96KN9 370 aaPredicted RBP18.6■□□□□ 0.57
USP35-206ENST00000530535 NECTIN1Q15223 517 aa18.59■□□□□ 0.57
USP35-206ENST00000530535 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
USP35-206ENST00000530535 KAZALD1Q96I82 304 aa18.59■□□□□ 0.57
USP35-206ENST00000530535 MTMR6Q9Y217 621 aa18.59■□□□□ 0.57
USP35-206ENST00000530535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.59■□□□□ 0.57
USP35-206ENST00000530535 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
USP35-206ENST00000530535 CWF19L2Q2TBE0 894 aaKnown RBP18.59■□□□□ 0.57
USP35-206ENST00000530535 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
USP35-206ENST00000530535 JAKMIP1Q96N16 626 aaKnown RBP18.59■□□□□ 0.57
USP35-206ENST00000530535 UTYO14607 1347 aa18.59■□□□□ 0.57
USP35-206ENST00000530535 A0A0G2JS52 829 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 MYL6BP14649 208 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 CCDC83Q8IWF9 413 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 FUCA2Q9BTY2 467 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 PDRG1Q9NUG6 133 aa18.58■□□□□ 0.57
USP35-206ENST00000530535 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.57
USP35-206ENST00000530535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.58■□□□□ 0.57
USP35-206ENST00000530535 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.56
USP35-206ENST00000530535 GJB2P29033 226 aa18.58■□□□□ 0.56
USP35-206ENST00000530535 EVI5LQ96CN4 794 aa18.58■□□□□ 0.56
USP35-206ENST00000530535 SNRKQ9NRH2 765 aa18.58■□□□□ 0.56
USP35-206ENST00000530535 C9orf78Q9NZ63 289 aaPredicted RBP18.58■□□□□ 0.56
USP35-206ENST00000530535 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
USP35-206ENST00000530535 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
USP35-206ENST00000530535 FIBPO43427 364 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 SASH1O94885 1247 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 IFIT2P09913 472 aaKnown RBP18.56■□□□□ 0.56
USP35-206ENST00000530535 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 GPATCH3Q96I76 525 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 ATRNO75882 1429 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 DTNBO60941 627 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 LETM1O95202 739 aaPredicted RBP18.56■□□□□ 0.56
USP35-206ENST00000530535 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
USP35-206ENST00000530535 ME3Q16798 604 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 AACSQ86V21 672 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 ZSCAN31Q96LW9 406 aaPredicted RBP18.56■□□□□ 0.56
USP35-206ENST00000530535 ATP6V1DQ9Y5K8 247 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 CYP46A1Q9Y6A2 500 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 DOT1LQ8TEK3 1739 aa18.56■□□□□ 0.56
USP35-206ENST00000530535 DDX58O95786 925 aaKnown RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 COL9A3Q14050 684 aaPredicted RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 LRP10Q7Z4F1 713 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 GRM8O00222 908 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 DNM1Q05193 864 aaKnown RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 MAP4K1Q92918 833 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 RBM8AQ9Y5S9 174 aaKnown RBP18.55■□□□□ 0.56
USP35-206ENST00000530535 LAMB4A4D0S4 1761 aa18.55■□□□□ 0.56
USP35-206ENST00000530535 CREB3L3Q68CJ9 461 aa18.54■□□□□ 0.56
USP35-206ENST00000530535 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
USP35-206ENST00000530535 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
USP35-206ENST00000530535 XAGE3Q8WTP9 111 aa18.54■□□□□ 0.56
USP35-206ENST00000530535 PTMAP06454 111 aaKnown RBP18.53■□□□□ 0.56
USP35-206ENST00000530535 NMIQ13287 307 aaPredicted RBP18.53■□□□□ 0.56
USP35-206ENST00000530535 BICC1Q9H694 974 aaKnown RBP18.53■□□□□ 0.56
USP35-206ENST00000530535 TPCN1Q9ULQ1 816 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 UQCRHLA0A096LP55 91 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
USP35-206ENST00000530535 UQCRHP07919 91 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 NBPF14Q5TI25 921 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
USP35-206ENST00000530535 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
USP35-206ENST00000530535 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.56
USP35-206ENST00000530535 A1BGP04217 495 aa18.52■□□□□ 0.56
USP35-206ENST00000530535 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
USP35-206ENST00000530535 NECAB1Q8N987 351 aa18.52■□□□□ 0.56
USP35-206ENST00000530535 TLR7Q9NYK1 1049 aaKnown RBP18.52■□□□□ 0.56
USP35-206ENST00000530535 MED23Q9ULK4 1368 aa18.52■□□□□ 0.56
USP35-206ENST00000530535 ADCY5O95622 1261 aa18.52■□□□□ 0.55
USP35-206ENST00000530535 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.55
USP35-206ENST00000530535 SLC27A2O14975 620 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 IGKV5-2P06315 115 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 GLIPR1L2Q4G1C9 344 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 SASS6Q6UVJ0 657 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 RIC3Q7Z5B4 369 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 SLC4A9Q96Q91 983 aa18.51■□□□□ 0.55
USP35-206ENST00000530535 A0A0D9SFI3 127 aa18.5■□□□□ 0.55
USP35-206ENST00000530535 HIP1O00291 1037 aa18.5■□□□□ 0.55
USP35-206ENST00000530535 KCNQ2O43526 872 aa18.5■□□□□ 0.55
USP35-206ENST00000530535 STARD3NLO95772 234 aa18.5■□□□□ 0.55
USP35-206ENST00000530535 ZKSCAN1P17029 563 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms