RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ORC1Q13415 861 aa10.16□□□□□ -0.78
CASP4-208ENST00000530309 ENOX2Q16206 610 aaKnown RBP10.16□□□□□ -0.78
CASP4-208ENST00000530309 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
CASP4-208ENST00000530309 PNMA5Q96PV4 448 aa10.16□□□□□ -0.78
CASP4-208ENST00000530309 CSRNP1Q96S65 589 aa10.16□□□□□ -0.78
CASP4-208ENST00000530309 SLC30A3Q99726 388 aa10.16□□□□□ -0.78
CASP4-208ENST00000530309 DNAJC25Q9H1X3 360 aa10.16□□□□□ -0.78
CASP4-208ENST00000530309 ABI2Q9NYB9 513 aaPredicted RBP10.16□□□□□ -0.78
CASP4-208ENST00000530309 FOXD3Q9UJU5 478 aaPredicted RBP10.16□□□□□ -0.78
CASP4-208ENST00000530309 H3BM21 787 aa10.15□□□□□ -0.78
CASP4-208ENST00000530309 EIF1AYO14602 144 aaKnown RBP10.15□□□□□ -0.78
CASP4-208ENST00000530309 PHACTR2O75167 634 aa10.15□□□□□ -0.78
CASP4-208ENST00000530309 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.78
CASP4-208ENST00000530309 TAGLNQ01995 201 aaKnown RBP10.15□□□□□ -0.78
CASP4-208ENST00000530309 TTC39BQ5VTQ0 682 aaPredicted RBP10.15□□□□□ -0.78
CASP4-208ENST00000530309 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
CASP4-208ENST00000530309 PNMA6FA0A0J9YX94 578 aa10.14□□□□□ -0.79
CASP4-208ENST00000530309 CPNE3O75131 537 aaKnown RBP10.14□□□□□ -0.79
CASP4-208ENST00000530309 LDHBP07195 334 aaKnown RBP10.14□□□□□ -0.79
CASP4-208ENST00000530309 FGD1P98174 961 aa10.14□□□□□ -0.79
CASP4-208ENST00000530309 ATP2B2Q01814 1243 aa10.14□□□□□ -0.79
CASP4-208ENST00000530309 ZFATQ9P243 1243 aa10.14□□□□□ -0.79
CASP4-208ENST00000530309 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
CASP4-208ENST00000530309 RARAP10276 462 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 NFKB1P19838 968 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 NEUROD1Q13562 356 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 C1orf127Q8N9H9 656 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 BHMTQ93088 406 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 ZFYVE28Q9HCC9 887 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 CNTN3Q9P232 1028 aa10.13□□□□□ -0.79
CASP4-208ENST00000530309 PRPF40AO75400 957 aaKnown RBP10.12□□□□□ -0.79
CASP4-208ENST00000530309 MAP3K6O95382 1288 aa10.12□□□□□ -0.79
CASP4-208ENST00000530309 ALG1LQ6GMV1 187 aa10.12□□□□□ -0.79
CASP4-208ENST00000530309 PMEPA1Q969W9 287 aa10.12□□□□□ -0.79
CASP4-208ENST00000530309 WWC3Q9ULE0 1092 aa10.12□□□□□ -0.79
CASP4-208ENST00000530309 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
CASP4-208ENST00000530309 MMP20O60882 483 aa10.11□□□□□ -0.79
CASP4-208ENST00000530309 BMP4P12644 408 aa10.11□□□□□ -0.79
CASP4-208ENST00000530309 MX2P20592 715 aa10.11□□□□□ -0.79
CASP4-208ENST00000530309 RAB44Q7Z6P3 723 aaPredicted RBP10.11□□□□□ -0.79
CASP4-208ENST00000530309 GPR161Q8N6U8 529 aaKnown RBP10.11□□□□□ -0.79
CASP4-208ENST00000530309 CHRDQ9H2X0 955 aa10.11□□□□□ -0.79
CASP4-208ENST00000530309 C2CD2LO14523 706 aa10.1□□□□□ -0.79
CASP4-208ENST00000530309 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
CASP4-208ENST00000530309 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
CASP4-208ENST00000530309 CES1P23141 567 aa10.1□□□□□ -0.79
CASP4-208ENST00000530309 GAS6Q14393 721 aa10.1□□□□□ -0.79
CASP4-208ENST00000530309 OR13H1Q8NG92 308 aa10.1□□□□□ -0.79
CASP4-208ENST00000530309 SETDB2Q96T68 719 aa10.1□□□□□ -0.79
CASP4-208ENST00000530309 TLR7Q9NYK1 1049 aaKnown RBP10.1□□□□□ -0.79
CASP4-208ENST00000530309 UNCXA6NJT0 531 aa10.09□□□□□ -0.79
CASP4-208ENST00000530309 PSAPP07602 524 aa10.09□□□□□ -0.79
CASP4-208ENST00000530309 ZNF468Q5VIY5 522 aaPredicted RBP10.09□□□□□ -0.79
CASP4-208ENST00000530309 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
CASP4-208ENST00000530309 FBF1Q8TES7 1133 aa10.09□□□□□ -0.79
CASP4-208ENST00000530309 SLC16A10Q8TF71 515 aa10.09□□□□□ -0.79
CASP4-208ENST00000530309 EREGO14944 169 aa10.08□□□□□ -0.8
CASP4-208ENST00000530309 SOX18P35713 384 aa10.08□□□□□ -0.8
CASP4-208ENST00000530309 CCDC74AQ96AQ1 378 aa10.08□□□□□ -0.8
CASP4-208ENST00000530309 DUSP9Q99956 384 aaKnown RBP10.08□□□□□ -0.8
CASP4-208ENST00000530309 PHF20L1A8MW92 1017 aa10.07□□□□□ -0.8
CASP4-208ENST00000530309 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
CASP4-208ENST00000530309 DHX32Q7L7V1 743 aaKnown RBP10.07□□□□□ -0.8
CASP4-208ENST00000530309 SYT9Q86SS6 491 aa10.07□□□□□ -0.8
CASP4-208ENST00000530309 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
CASP4-208ENST00000530309 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
CASP4-208ENST00000530309 NSFL1CQ9UNZ2 370 aaKnown RBP10.07□□□□□ -0.8
CASP4-208ENST00000530309 E9PSI1 815 aa10.06□□□□□ -0.8
CASP4-208ENST00000530309 POLR3DP05423 398 aaPredicted RBP10.06□□□□□ -0.8
CASP4-208ENST00000530309 HOXD8P13378 290 aaPredicted RBP10.06□□□□□ -0.8
CASP4-208ENST00000530309 XPCQ01831 940 aaPredicted RBP10.06□□□□□ -0.8
CASP4-208ENST00000530309 PLAURQ03405 335 aa10.06□□□□□ -0.8
CASP4-208ENST00000530309 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
CASP4-208ENST00000530309 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
CASP4-208ENST00000530309 AVENQ9NQS1 362 aaPredicted RBP10.06□□□□□ -0.8
CASP4-208ENST00000530309 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
CASP4-208ENST00000530309 SIN3BO75182 1162 aa10.05□□□□□ -0.8
CASP4-208ENST00000530309 MAP2K3P46734 347 aa10.05□□□□□ -0.8
CASP4-208ENST00000530309 GALNT12Q8IXK2 581 aa10.05□□□□□ -0.8
CASP4-208ENST00000530309 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
CASP4-208ENST00000530309 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
CASP4-208ENST00000530309 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
CASP4-208ENST00000530309 ARAFP10398 606 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 EDN3P14138 238 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 NRLP54845 237 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 PCBP4P57723 403 aaKnown RBP10.04□□□□□ -0.8
CASP4-208ENST00000530309 HYAL2Q12891 473 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
CASP4-208ENST00000530309 EPS8L3Q8TE67 593 aaKnown RBP10.04□□□□□ -0.8
CASP4-208ENST00000530309 IRF7Q92985 503 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 NLRP2Q9NX02 1062 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
CASP4-208ENST00000530309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
CASP4-208ENST00000530309 GNA15P30679 374 aa10.03□□□□□ -0.8
CASP4-208ENST00000530309 DAB2P98082 770 aa10.03□□□□□ -0.8
CASP4-208ENST00000530309 PCSK7Q16549 785 aa10.03□□□□□ -0.8
CASP4-208ENST00000530309 RNFT1Q5M7Z0 435 aa10.03□□□□□ -0.8
CASP4-208ENST00000530309 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
CASP4-208ENST00000530309 TRPM4Q8TD43 1214 aa10.03□□□□□ -0.8
CASP4-208ENST00000530309 FRMD6Q96NE9 622 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms