RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 COL4A5P29400 1685 aa9.39□□□□□ -0.91
CLINT1-209ENST00000530302 ABCC4O15439 1325 aa9.38□□□□□ -0.91
CLINT1-209ENST00000530302 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
CLINT1-209ENST00000530302 F6X3S4 739 aa9.38□□□□□ -0.91
CLINT1-209ENST00000530302 DDX58O95786 925 aaKnown RBP9.38□□□□□ -0.91
CLINT1-209ENST00000530302 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
CLINT1-209ENST00000530302 FKBP5Q13451 457 aaPredicted RBP9.38□□□□□ -0.91
CLINT1-209ENST00000530302 ZNF526Q8TF50 670 aaPredicted RBP9.38□□□□□ -0.91
CLINT1-209ENST00000530302 RPGRQ92834 1020 aaKnown RBP9.38□□□□□ -0.91
CLINT1-209ENST00000530302 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
CLINT1-209ENST00000530302 RNF181Q9P0P0 153 aa9.38□□□□□ -0.91
CLINT1-209ENST00000530302 SPEF2Q9C093 1822 aa9.38□□□□□ -0.91
CLINT1-209ENST00000530302 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
CLINT1-209ENST00000530302 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
CLINT1-209ENST00000530302 ZBTB38Q8NAP3 1195 aaPredicted RBP9.37□□□□□ -0.91
CLINT1-209ENST00000530302 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
CLINT1-209ENST00000530302 LTBP1Q14766 1721 aa9.36□□□□□ -0.91
CLINT1-209ENST00000530302 IRS4O14654 1257 aaPredicted RBP9.36□□□□□ -0.91
CLINT1-209ENST00000530302 PPEF1O14829 653 aaPredicted RBP9.36□□□□□ -0.91
CLINT1-209ENST00000530302 HNRNPUQ00839 825 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLINT1-209ENST00000530302 MRPL50Q8N5N7 158 aaKnown RBP9.36□□□□□ -0.91
CLINT1-209ENST00000530302 CCDC191Q8NCU4 936 aa9.36□□□□□ -0.91
CLINT1-209ENST00000530302 DNAAF4Q8WXU2 420 aa9.36□□□□□ -0.91
CLINT1-209ENST00000530302 NLRP3Q96P20 1036 aa9.36□□□□□ -0.91
CLINT1-209ENST00000530302 CRAMP1Q96RY5 1269 aa9.36□□□□□ -0.91
CLINT1-209ENST00000530302 TAOK3Q9H2K8 898 aa9.36□□□□□ -0.91
CLINT1-209ENST00000530302 CWC25Q9NXE8 425 aaPredicted RBP9.36□□□□□ -0.91
CLINT1-209ENST00000530302 LTBP3Q9NS15 1303 aa9.35□□□□□ -0.91
CLINT1-209ENST00000530302 PCCAP05165 728 aaPredicted RBP9.35□□□□□ -0.91
CLINT1-209ENST00000530302 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
CLINT1-209ENST00000530302 LMNB1P20700 586 aa9.35□□□□□ -0.91
CLINT1-209ENST00000530302 CASP7P55210 303 aa9.35□□□□□ -0.91
CLINT1-209ENST00000530302 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
CLINT1-209ENST00000530302 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
CLINT1-209ENST00000530302 RBM17Q96I25 401 aaKnown RBP9.35□□□□□ -0.91
CLINT1-209ENST00000530302 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
CLINT1-209ENST00000530302 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
CLINT1-209ENST00000530302 ZNF277Q9NRM2 450 aaPredicted RBP9.35□□□□□ -0.91
CLINT1-209ENST00000530302 ALDH1B1P30837 517 aa9.34□□□□□ -0.91
CLINT1-209ENST00000530302 GCKRQ14397 625 aa9.34□□□□□ -0.91
CLINT1-209ENST00000530302 SF3B3Q15393 1217 aaKnown RBP9.34□□□□□ -0.91
CLINT1-209ENST00000530302 BEND3Q5T5X7 828 aa9.34□□□□□ -0.91
CLINT1-209ENST00000530302 UBE3BQ7Z3V4 1068 aa9.34□□□□□ -0.91
CLINT1-209ENST00000530302 SEC31BQ9NQW1 1179 aa9.34□□□□□ -0.91
CLINT1-209ENST00000530302 CDHR2Q9BYE9 1310 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 H7C1W4 665 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 FKBP4Q02790 459 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLINT1-209ENST00000530302 NEXNQ0ZGT2 675 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 GRAPQ13588 217 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
CLINT1-209ENST00000530302 NMRK2Q9NPI5 230 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 ATP6V0A2Q9Y487 856 aa9.33□□□□□ -0.92
CLINT1-209ENST00000530302 A0A1B0GUL6 1792 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 KIF3CO14782 793 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 PDE8AO60658 829 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 CTSWP56202 376 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 SOGA3Q5TF21 947 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 SLC4A10Q6U841 1118 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 DDX46Q7L014 1031 aaKnown RBP9.32□□□□□ -0.92
CLINT1-209ENST00000530302 GPBP1L1Q9HC44 474 aaPredicted RBP9.32□□□□□ -0.92
CLINT1-209ENST00000530302 SMC4Q9NTJ3 1288 aa9.32□□□□□ -0.92
CLINT1-209ENST00000530302 ZNF541Q9H0D2 1346 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 IARSP41252 1262 aaKnown RBP9.31□□□□□ -0.92
CLINT1-209ENST00000530302 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 EPHA10Q5JZY3 1008 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 RTKN2Q8IZC4 609 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 PSMD1Q99460 953 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 GREM2Q9H772 168 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 WDR90Q96KV7 1748 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
CLINT1-209ENST00000530302 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 BBOX1O75936 387 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 RARSP54136 660 aaKnown RBP9.3□□□□□ -0.92
CLINT1-209ENST00000530302 ALDH1L2Q3SY69 923 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 SP8Q8IXZ3 490 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 GPR101Q96P66 508 aaPredicted RBP9.3□□□□□ -0.92
CLINT1-209ENST00000530302 TNNQ9UQP3 1299 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 CLEC11AQ9Y240 323 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 PTPRCP08575 1304 aa9.3□□□□□ -0.92
CLINT1-209ENST00000530302 ZC3H4Q9UPT8 1303 aaKnown RBP9.3□□□□□ -0.92
CLINT1-209ENST00000530302 RTL9Q8NET4 1388 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 GLTPD2A6NH11 291 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 WTIPA6NIX2 430 aaPredicted RBP9.29□□□□□ -0.92
CLINT1-209ENST00000530302 POTECB2RU33 542 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 GRM8O00222 908 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 CT47B1P0C2W7 299 aaPredicted RBP9.29□□□□□ -0.92
CLINT1-209ENST00000530302 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
CLINT1-209ENST00000530302 RPS8P62241 208 aaKnown RBP9.29□□□□□ -0.92
CLINT1-209ENST00000530302 GPSM2P81274 684 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 FOXO4P98177 505 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 AOC3Q16853 763 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 CCDC152Q4G0S7 254 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 KAZALD1Q96I82 304 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 PLA2G12BQ9BX93 195 aa9.29□□□□□ -0.92
CLINT1-209ENST00000530302 RTFDC1Q9BY42 306 aaPredicted RBP9.29□□□□□ -0.92
CLINT1-209ENST00000530302 NOB1Q9ULX3 412 aaKnown RBP9.29□□□□□ -0.92
CLINT1-209ENST00000530302 FZD9O00144 591 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms