RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
TTC39A-216ENST00000530004 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
TTC39A-216ENST00000530004 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
TTC39A-216ENST00000530004 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
TTC39A-216ENST00000530004 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
TTC39A-216ENST00000530004 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
TTC39A-216ENST00000530004 RBM19Q9Y4C8 960 aaKnown RBP17.85■□□□□ 0.45
TTC39A-216ENST00000530004 SRGAP3O43295 1099 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 PDE8AO60658 829 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 BACH2Q9BYV9 841 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
TTC39A-216ENST00000530004 APBB1O00213 710 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 POLA2Q14181 598 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 EPHA10Q5JZY3 1008 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 EXOC6BQ9Y2D4 811 aa17.84■□□□□ 0.45
TTC39A-216ENST00000530004 RIC1Q4ADV7 1423 aa17.83■□□□□ 0.45
TTC39A-216ENST00000530004 FOXO4P98177 505 aa17.83■□□□□ 0.44
TTC39A-216ENST00000530004 MTX1Q13505 466 aa17.83■□□□□ 0.44
TTC39A-216ENST00000530004 BRIP1Q9BX63 1249 aa17.83■□□□□ 0.44
TTC39A-216ENST00000530004 BICC1Q9H694 974 aaKnown RBP17.83■□□□□ 0.44
TTC39A-216ENST00000530004 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
TTC39A-216ENST00000530004 C10orf71Q711Q0 1435 aa17.82■□□□□ 0.44
TTC39A-216ENST00000530004 CTSWP56202 376 aa17.81■□□□□ 0.44
TTC39A-216ENST00000530004 RABL6Q3YEC7 729 aaPredicted RBP17.81■□□□□ 0.44
TTC39A-216ENST00000530004 C3orf67Q6ZVT6 689 aa17.81■□□□□ 0.44
TTC39A-216ENST00000530004 SMARCA5O60264 1052 aaPredicted RBP17.81■□□□□ 0.44
TTC39A-216ENST00000530004 CSF1RP07333 972 aa17.81■□□□□ 0.44
TTC39A-216ENST00000530004 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
TTC39A-216ENST00000530004 C8orf34Q49A92 452 aa17.81■□□□□ 0.44
TTC39A-216ENST00000530004 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
TTC39A-216ENST00000530004 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
TTC39A-216ENST00000530004 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
TTC39A-216ENST00000530004 LMBR1LQ6UX01 489 aa17.8■□□□□ 0.44
TTC39A-216ENST00000530004 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
TTC39A-216ENST00000530004 PDE6BP35913 854 aa17.79■□□□□ 0.44
TTC39A-216ENST00000530004 CRY2Q49AN0 593 aa17.79■□□□□ 0.44
TTC39A-216ENST00000530004 DDX60Q8IY21 1712 aaKnown RBP17.79■□□□□ 0.44
TTC39A-216ENST00000530004 CCDC85AQ96PX6 553 aaPredicted RBP17.79■□□□□ 0.44
TTC39A-216ENST00000530004 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
TTC39A-216ENST00000530004 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
TTC39A-216ENST00000530004 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
TTC39A-216ENST00000530004 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
TTC39A-216ENST00000530004 LAMB2P55268 1798 aa17.78■□□□□ 0.44
TTC39A-216ENST00000530004 GREM2Q9H772 168 aa17.77■□□□□ 0.44
TTC39A-216ENST00000530004 RAB11FIP3O75154 756 aa17.76■□□□□ 0.43
TTC39A-216ENST00000530004 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
TTC39A-216ENST00000530004 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
TTC39A-216ENST00000530004 SRGNP10124 158 aa17.76■□□□□ 0.43
TTC39A-216ENST00000530004 PLEKHM2Q8IWE5 1019 aa17.76■□□□□ 0.43
TTC39A-216ENST00000530004 OTUD7AQ8TE49 926 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-216ENST00000530004 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-216ENST00000530004 ANKRD31Q8N7Z5 1873 aa17.76■□□□□ 0.43
TTC39A-216ENST00000530004 RTL9Q8NET4 1388 aa17.75■□□□□ 0.43
TTC39A-216ENST00000530004 ITGA6P23229 1130 aa17.75■□□□□ 0.43
TTC39A-216ENST00000530004 HSP90AB4PQ58FF6 505 aa17.75■□□□□ 0.43
TTC39A-216ENST00000530004 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
TTC39A-216ENST00000530004 H0YIN7 160 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 CHRNA5P30532 468 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 TGFB2P61812 414 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 IFIT5Q13325 482 aaKnown RBP17.74■□□□□ 0.43
TTC39A-216ENST00000530004 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 C2CD5Q86YS7 1000 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 RPGRQ92834 1020 aaKnown RBP17.74■□□□□ 0.43
TTC39A-216ENST00000530004 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 PA2G4Q9UQ80 394 aaKnown RBP17.74■□□□□ 0.43
TTC39A-216ENST00000530004 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
TTC39A-216ENST00000530004 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
TTC39A-216ENST00000530004 KIF1BPQ96EK5 621 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 MASTLQ96GX5 879 aa17.74■□□□□ 0.43
TTC39A-216ENST00000530004 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
TTC39A-216ENST00000530004 NPR1P16066 1061 aa17.73■□□□□ 0.43
TTC39A-216ENST00000530004 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
TTC39A-216ENST00000530004 BMP2KLQ5H9B9 411 aa17.73■□□□□ 0.43
TTC39A-216ENST00000530004 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
TTC39A-216ENST00000530004 RHPN1Q8TCX5 695 aa17.73■□□□□ 0.43
TTC39A-216ENST00000530004 RBM17Q96I25 401 aaKnown RBP17.72■□□□□ 0.43
TTC39A-216ENST00000530004 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
TTC39A-216ENST00000530004 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
TTC39A-216ENST00000530004 MYH3P11055 1940 aa17.72■□□□□ 0.43
TTC39A-216ENST00000530004 DPEP1P16444 411 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 CDC5LQ99459 802 aaKnown RBP17.71■□□□□ 0.43
TTC39A-216ENST00000530004 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.43
TTC39A-216ENST00000530004 A0A0G2JLW4 131 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 KCNA3P22001 575 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
TTC39A-216ENST00000530004 GRAPQ13588 217 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 STYK1Q6J9G0 422 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
TTC39A-216ENST00000530004 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
TTC39A-216ENST00000530004 CELF1Q92879 486 aaKnown RBP17.71■□□□□ 0.43
TTC39A-216ENST00000530004 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.43
TTC39A-216ENST00000530004 ALDH1B1P30837 517 aa17.7■□□□□ 0.42
TTC39A-216ENST00000530004 TTC22Q5TAA0 569 aa17.7■□□□□ 0.42
TTC39A-216ENST00000530004 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
TTC39A-216ENST00000530004 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
TTC39A-216ENST00000530004 COPRSQ9NQ92 184 aa17.7■□□□□ 0.42
TTC39A-216ENST00000530004 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms