RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 NBPF7P0C2Y1 421 aaPredicted RBP31.31■■■□□ 2.6
LTBP3-213ENST00000529371 UBTFL1P0CB47 393 aaPredicted RBP31.31■■■□□ 2.6
LTBP3-213ENST00000529371 BRCA1P38398 1863 aaKnown RBP31.31■■■□□ 2.6
LTBP3-213ENST00000529371 MYH3P11055 1940 aa31.3■■■□□ 2.6
LTBP3-213ENST00000529371 HOXA10P31260 410 aaPredicted RBP31.3■■■□□ 2.6
LTBP3-213ENST00000529371 PANK1Q8TE04 598 aa31.3■■■□□ 2.6
LTBP3-213ENST00000529371 CRAMP1Q96RY5 1269 aa31.3■■■□□ 2.6
LTBP3-213ENST00000529371 RLBP1P12271 317 aa31.29■■■□□ 2.6
LTBP3-213ENST00000529371 GNAI3P08754 354 aa31.28■■■□□ 2.6
LTBP3-213ENST00000529371 RRP1P56182 461 aaKnown RBP31.28■■■□□ 2.6
LTBP3-213ENST00000529371 SUCLG2Q96I99 432 aa31.28■■■□□ 2.6
LTBP3-213ENST00000529371 CCDC85AQ96PX6 553 aaPredicted RBP31.28■■■□□ 2.6
LTBP3-213ENST00000529371 SRCAPQ6ZRS2 3230 aa31.27■■■□□ 2.6
LTBP3-213ENST00000529371 PDE3AQ14432 1141 aa31.27■■■□□ 2.6
LTBP3-213ENST00000529371 PRPF40BQ6NWY9 871 aaKnown RBP31.27■■■□□ 2.6
LTBP3-213ENST00000529371 MEIS3Q99687 375 aa31.27■■■□□ 2.6
LTBP3-213ENST00000529371 CHMP3Q9Y3E7 222 aa31.27■■■□□ 2.6
LTBP3-213ENST00000529371 TTLL11Q8NHH1 800 aa31.26■■■□□ 2.59
LTBP3-213ENST00000529371 CACNA1SQ13698 1873 aa31.26■■■□□ 2.59
LTBP3-213ENST00000529371 GRAPQ13588 217 aa31.25■■■□□ 2.59
LTBP3-213ENST00000529371 GRAPLQ8TC17 118 aaPredicted RBP31.25■■■□□ 2.59
LTBP3-213ENST00000529371 FOXO4P98177 505 aa31.23■■■□□ 2.59
LTBP3-213ENST00000529371 CDC5LQ99459 802 aaKnown RBP31.23■■■□□ 2.59
LTBP3-213ENST00000529371 TMX4Q9H1E5 349 aaPredicted RBP31.23■■■□□ 2.59
LTBP3-213ENST00000529371 RTL9Q8NET4 1388 aa31.22■■■□□ 2.59
LTBP3-213ENST00000529371 PPEF1O14829 653 aaPredicted RBP31.22■■■□□ 2.59
LTBP3-213ENST00000529371 YBX3P16989 372 aaKnown RBP eCLIP31.22■■■□□ 2.59
LTBP3-213ENST00000529371 MVPQ14764 893 aaKnown RBP31.22■■■□□ 2.59
LTBP3-213ENST00000529371 LMBR1LQ6UX01 489 aa31.22■■■□□ 2.59
LTBP3-213ENST00000529371 GREM2Q9H772 168 aa31.22■■■□□ 2.59
LTBP3-213ENST00000529371 ZNF219Q9P2Y4 722 aaPredicted RBP31.22■■■□□ 2.59
LTBP3-213ENST00000529371 GRIN3BO60391 1043 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 CSF1RP07333 972 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 FAM161AQ3B820 660 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 EPHA10Q5JZY3 1008 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 SOGA3Q5TF21 947 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 CHMP4BQ9H444 224 aaKnown RBP31.21■■■□□ 2.59
LTBP3-213ENST00000529371 BICC1Q9H694 974 aaKnown RBP31.21■■■□□ 2.59
LTBP3-213ENST00000529371 DDX19BQ9UMR2 479 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 COG6Q9Y2V7 657 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 ARFGEF1Q9Y6D6 1849 aa31.21■■■□□ 2.59
LTBP3-213ENST00000529371 BBOX1O75936 387 aa31.2■■■□□ 2.59
LTBP3-213ENST00000529371 SEC31BQ9NQW1 1179 aa31.2■■■□□ 2.59
LTBP3-213ENST00000529371 LRRFIP2Q9Y608 721 aaKnown RBP31.2■■■□□ 2.59
LTBP3-213ENST00000529371 SLX4Q8IY92 1834 aa31.19■■■□□ 2.58
LTBP3-213ENST00000529371 ANKRD18BA2A2Z9 1011 aa31.19■■■□□ 2.58
LTBP3-213ENST00000529371 C21orf2O43822 256 aa31.19■■■□□ 2.58
LTBP3-213ENST00000529371 TMC4Q7Z404 712 aa31.19■■■□□ 2.58
LTBP3-213ENST00000529371 ANKRD18AQ8IVF6 992 aa31.19■■■□□ 2.58
LTBP3-213ENST00000529371 GNAI2P04899 355 aa31.18■■■□□ 2.58
LTBP3-213ENST00000529371 ITGA6P23229 1130 aa31.18■■■□□ 2.58
LTBP3-213ENST00000529371 IFIT5Q13325 482 aaKnown RBP31.18■■■□□ 2.58
LTBP3-213ENST00000529371 CCDC57Q2TAC2 916 aa31.18■■■□□ 2.58
LTBP3-213ENST00000529371 C20orf194Q5TEA3 1177 aa31.18■■■□□ 2.58
LTBP3-213ENST00000529371 CELF1Q92879 486 aaKnown RBP31.18■■■□□ 2.58
LTBP3-213ENST00000529371 KAZALD1Q96I82 304 aa31.18■■■□□ 2.58
LTBP3-213ENST00000529371 RPS8P62241 208 aaKnown RBP31.17■■■□□ 2.58
LTBP3-213ENST00000529371 TAF7LQ5H9L4 462 aa31.17■■■□□ 2.58
LTBP3-213ENST00000529371 IGHMBP2P38935 993 aaKnown RBP31.16■■■□□ 2.58
LTBP3-213ENST00000529371 RABL6Q3YEC7 729 aaPredicted RBP31.16■■■□□ 2.58
LTBP3-213ENST00000529371 CCDC93Q567U6 631 aa31.16■■■□□ 2.58
LTBP3-213ENST00000529371 CC2D2BQ6DHV5 1058 aa31.15■■■□□ 2.58
LTBP3-213ENST00000529371 ANKRD44Q8N8A2 993 aa31.15■■■□□ 2.58
LTBP3-213ENST00000529371 SUPT16HQ9Y5B9 1047 aaKnown RBP31.15■■■□□ 2.58
LTBP3-213ENST00000529371 ZBTB7BO15156 539 aaPredicted RBP31.14■■■□□ 2.58
LTBP3-213ENST00000529371 ARHGAP27Q6ZUM4 889 aa31.14■■■□□ 2.58
LTBP3-213ENST00000529371 ATP6V0A2Q9Y487 856 aa31.14■■■□□ 2.58
LTBP3-213ENST00000529371 TAF1P21675 1872 aa31.13■■■□□ 2.57
LTBP3-213ENST00000529371 SP8Q8IXZ3 490 aa31.12■■■□□ 2.57
LTBP3-213ENST00000529371 MPHOSPH8Q99549 860 aa31.12■■■□□ 2.57
LTBP3-213ENST00000529371 CENPBP07199 599 aaPredicted RBP31.11■■■□□ 2.57
LTBP3-213ENST00000529371 GRIPAP1Q4V328 841 aa31.11■■■□□ 2.57
LTBP3-213ENST00000529371 C7orf43Q8WVR3 580 aa31.11■■■□□ 2.57
LTBP3-213ENST00000529371 RTKN2Q8IZC4 609 aa31.1■■■□□ 2.57
LTBP3-213ENST00000529371 C1orf115Q9H7X2 142 aa31.08■■■□□ 2.57
LTBP3-213ENST00000529371 BSDC1Q9NW68 430 aaPredicted RBP31.08■■■□□ 2.57
LTBP3-213ENST00000529371 SPEF2Q9C093 1822 aa31.08■■■□□ 2.57
LTBP3-213ENST00000529371 COL4A1P02462 1669 aa31.07■■■□□ 2.56
LTBP3-213ENST00000529371 OLFM4Q6UX06 510 aa31.07■■■□□ 2.56
LTBP3-213ENST00000529371 TAOK3Q9H2K8 898 aa31.06■■■□□ 2.56
LTBP3-213ENST00000529371 ZNF594Q96JF6 807 aaPredicted RBP31.05■■■□□ 2.56
LTBP3-213ENST00000529371 CNNM1Q9NRU3 951 aa31.05■■■□□ 2.56
LTBP3-213ENST00000529371 LRRC37AA6NMS7 1700 aa31.04■■■□□ 2.56
LTBP3-213ENST00000529371 SRGAP3O43295 1099 aa31.04■■■□□ 2.56
LTBP3-213ENST00000529371 DPP8Q6V1X1 898 aaPredicted RBP31.04■■■□□ 2.56
LTBP3-213ENST00000529371 LDHAL6AQ6ZMR3 332 aa31.04■■■□□ 2.56
LTBP3-213ENST00000529371 MPNDQ8N594 471 aa31.04■■■□□ 2.56
LTBP3-213ENST00000529371 MTX1Q13505 466 aa31.03■■■□□ 2.56
LTBP3-213ENST00000529371 ZBTB40Q9NUA8 1239 aa31.03■■■□□ 2.56
LTBP3-213ENST00000529371 FKBP4Q02790 459 aaKnown RBP eCLIP31.02■■■□□ 2.56
LTBP3-213ENST00000529371 RASSF7Q02833 373 aa31.02■■■□□ 2.56
LTBP3-213ENST00000529371 CRBNQ96SW2 442 aa31.02■■■□□ 2.56
LTBP3-213ENST00000529371 ANKIB1Q9P2G1 1089 aa31.02■■■□□ 2.56
LTBP3-213ENST00000529371 NSFL1CQ9UNZ2 370 aaKnown RBP31.02■■■□□ 2.56
LTBP3-213ENST00000529371 FER1L6Q2WGJ9 1857 aa31.01■■■□□ 2.56
LTBP3-213ENST00000529371 LTBP3Q9NS15 1303 aa31.01■■■□□ 2.56
LTBP3-213ENST00000529371 NFKBIEO00221 500 aa31.01■■■□□ 2.55
LTBP3-213ENST00000529371 SLC51AQ86UW1 340 aa31.01■■■□□ 2.55
LTBP3-213ENST00000529371 SUPT20HQ8NEM7 779 aa31.01■■■□□ 2.55
LTBP3-213ENST00000529371 PSMD1Q99460 953 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms