RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 PARP10Q53GL7 1025 aa28.39■■■□□ 2.13
LTBP3-212ENST00000529189 TBC1D9BQ66K14 1250 aa28.39■■■□□ 2.13
LTBP3-212ENST00000529189 TRMT112Q9UI30 125 aaKnown RBP28.39■■■□□ 2.13
LTBP3-212ENST00000529189 FAM177BA6PVY3 158 aa28.38■■■□□ 2.13
LTBP3-212ENST00000529189 BICDL1Q6ZP65 573 aa28.38■■■□□ 2.13
LTBP3-212ENST00000529189 SYNE4Q8N205 404 aa28.38■■■□□ 2.13
LTBP3-212ENST00000529189 TBC1D2Q9BYX2 928 aa28.37■■■□□ 2.13
LTBP3-212ENST00000529189 AK9Q5TCS8 1911 aa28.37■■■□□ 2.13
LTBP3-212ENST00000529189 ANO8Q9HCE9 1232 aaPredicted RBP28.36■■■□□ 2.13
LTBP3-212ENST00000529189 G3BP1Q13283 466 aaKnown RBP eCLIP28.35■■■□□ 2.13
LTBP3-212ENST00000529189 CLASRPQ8N2M8 674 aaKnown RBP28.35■■■□□ 2.13
LTBP3-212ENST00000529189 UTP14AQ9BVJ6 771 aaKnown RBP28.35■■■□□ 2.13
LTBP3-212ENST00000529189 FOXO4P98177 505 aa28.35■■■□□ 2.13
LTBP3-212ENST00000529189 CDHR2Q9BYE9 1310 aa28.35■■■□□ 2.13
LTBP3-212ENST00000529189 COL24A1Q17RW2 1714 aa28.34■■■□□ 2.13
LTBP3-212ENST00000529189 TRIM6-TRIM34B2RNG4 842 aa28.34■■■□□ 2.13
LTBP3-212ENST00000529189 RABL6Q3YEC7 729 aaPredicted RBP28.34■■■□□ 2.13
LTBP3-212ENST00000529189 NTSR2O95665 410 aa28.33■■■□□ 2.13
LTBP3-212ENST00000529189 CCDC125Q86Z20 511 aa28.33■■■□□ 2.13
LTBP3-212ENST00000529189 GYS1P13807 737 aa28.32■■■□□ 2.12
LTBP3-212ENST00000529189 LMBR1LQ6UX01 489 aa28.32■■■□□ 2.12
LTBP3-212ENST00000529189 COL23A1Q86Y22 540 aaPredicted RBP28.32■■■□□ 2.12
LTBP3-212ENST00000529189 PI4K2BQ8TCG2 481 aa28.32■■■□□ 2.12
LTBP3-212ENST00000529189 RILPL2Q969X0 211 aa28.32■■■□□ 2.12
LTBP3-212ENST00000529189 SH3TC1Q8TE82 1336 aa28.32■■■□□ 2.12
LTBP3-212ENST00000529189 IRS4O14654 1257 aaPredicted RBP28.31■■■□□ 2.12
LTBP3-212ENST00000529189 ERC2O15083 957 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 TTC41PQ6P2S7 1318 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 SETDB2Q96T68 719 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 PNPLA7Q6ZV29 1317 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 REC8O95072 547 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 NBR1Q14596 966 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 PLA2G12BQ9BX93 195 aa28.31■■■□□ 2.12
LTBP3-212ENST00000529189 USP26Q9BXU7 913 aa28.3■■■□□ 2.12
LTBP3-212ENST00000529189 SLC15A2Q16348 729 aa28.3■■■□□ 2.12
LTBP3-212ENST00000529189 KIF2CQ99661 725 aa28.3■■■□□ 2.12
LTBP3-212ENST00000529189 STK32BQ9NY57 414 aa28.3■■■□□ 2.12
LTBP3-212ENST00000529189 CHMP3Q9Y3E7 222 aa28.3■■■□□ 2.12
LTBP3-212ENST00000529189 SASH1O94885 1247 aa28.29■■■□□ 2.12
LTBP3-212ENST00000529189 FLAD1Q8NFF5 587 aa28.29■■■□□ 2.12
LTBP3-212ENST00000529189 GPATCH3Q96I76 525 aa28.29■■■□□ 2.12
LTBP3-212ENST00000529189 DDX60Q8IY21 1712 aaKnown RBP28.29■■■□□ 2.12
LTBP3-212ENST00000529189 IFIT2P09913 472 aaKnown RBP28.28■■■□□ 2.12
LTBP3-212ENST00000529189 NFIXQ14938 502 aa28.28■■■□□ 2.12
LTBP3-212ENST00000529189 HSCBQ8IWL3 235 aa28.28■■■□□ 2.12
LTBP3-212ENST00000529189 COPRSQ9NQ92 184 aa28.28■■■□□ 2.12
LTBP3-212ENST00000529189 MYH3P11055 1940 aa28.28■■■□□ 2.12
LTBP3-212ENST00000529189 LAMB2P55268 1798 aa28.28■■■□□ 2.12
LTBP3-212ENST00000529189 RFX5P48382 616 aaPredicted RBP28.28■■■□□ 2.12
LTBP3-212ENST00000529189 SIL1Q9H173 461 aa28.28■■■□□ 2.12
LTBP3-212ENST00000529189 SNX21Q969T3 373 aa28.27■■■□□ 2.12
LTBP3-212ENST00000529189 GLRX3O76003 335 aaKnown RBP28.26■■■□□ 2.11
LTBP3-212ENST00000529189 HCLS1P14317 486 aaPredicted RBP28.26■■■□□ 2.11
LTBP3-212ENST00000529189 CHMLP26374 656 aa28.26■■■□□ 2.11
LTBP3-212ENST00000529189 AACSQ86V21 672 aa28.26■■■□□ 2.11
LTBP3-212ENST00000529189 CARMIL3Q8ND23 1372 aa28.26■■■□□ 2.11
LTBP3-212ENST00000529189 ERFEQ4G0M1 354 aa28.26■■■□□ 2.11
LTBP3-212ENST00000529189 NBPF5PQ86XG9 351 aaPredicted RBP28.26■■■□□ 2.11
LTBP3-212ENST00000529189 KLHDC4Q8TBB5 520 aa28.26■■■□□ 2.11
LTBP3-212ENST00000529189 ESYT1Q9BSJ8 1104 aa28.26■■■□□ 2.11
LTBP3-212ENST00000529189 PDE8AO60658 829 aa28.25■■■□□ 2.11
LTBP3-212ENST00000529189 CTSWP56202 376 aa28.25■■■□□ 2.11
LTBP3-212ENST00000529189 CCDC85AQ96PX6 553 aaPredicted RBP28.25■■■□□ 2.11
LTBP3-212ENST00000529189 ECHDC1Q9NTX5 307 aa28.25■■■□□ 2.11
LTBP3-212ENST00000529189 QSER1Q2KHR3 1735 aa28.25■■■□□ 2.11
LTBP3-212ENST00000529189 PTPN12Q05209 780 aaKnown RBP28.24■■■□□ 2.11
LTBP3-212ENST00000529189 CNTROBQ8N137 903 aa28.24■■■□□ 2.11
LTBP3-212ENST00000529189 NYXQ9GZU5 481 aa28.24■■■□□ 2.11
LTBP3-212ENST00000529189 ABCC12Q96J65 1359 aa28.23■■■□□ 2.11
LTBP3-212ENST00000529189 CSF1RP07333 972 aa28.23■■■□□ 2.11
LTBP3-212ENST00000529189 GTF2E1P29083 439 aaPredicted RBP28.22■■■□□ 2.11
LTBP3-212ENST00000529189 TTLL11Q8NHH1 800 aa28.22■■■□□ 2.11
LTBP3-212ENST00000529189 MAP4K4O95819 1239 aaPredicted RBP28.21■■■□□ 2.11
LTBP3-212ENST00000529189 UPF1Q92900 1129 aaKnown RBP eCLIP28.21■■■□□ 2.11
LTBP3-212ENST00000529189 EAF2Q96CJ1 260 aaPredicted RBP28.21■■■□□ 2.11
LTBP3-212ENST00000529189 TPTE2Q6XPS3 522 aa28.2■■■□□ 2.11
LTBP3-212ENST00000529189 TM4SF1P30408 202 aa28.2■■■□□ 2.1
LTBP3-212ENST00000529189 GREM2Q9H772 168 aa28.2■■■□□ 2.1
LTBP3-212ENST00000529189 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.2■■■□□ 2.1
LTBP3-212ENST00000529189 HSP90B1P14625 803 aaKnown RBP28.19■■■□□ 2.1
LTBP3-212ENST00000529189 CCDC24Q8N4L8 307 aa28.19■■■□□ 2.1
LTBP3-212ENST00000529189 DDR1Q08345 913 aa28.19■■■□□ 2.1
LTBP3-212ENST00000529189 RABEP1Q15276 862 aa28.19■■■□□ 2.1
LTBP3-212ENST00000529189 SLKQ9H2G2 1235 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-212ENST00000529189 CASZ1Q86V15 1759 aa28.18■■■□□ 2.1
LTBP3-212ENST00000529189 NPHP1O15259 732 aa28.18■■■□□ 2.1
LTBP3-212ENST00000529189 CCDC57Q2TAC2 916 aa28.18■■■□□ 2.1
LTBP3-212ENST00000529189 CCDC8Q9H0W5 538 aaPredicted RBP28.18■■■□□ 2.1
LTBP3-212ENST00000529189 NLGN1Q8N2Q7 840 aa28.17■■■□□ 2.1
LTBP3-212ENST00000529189 CNBD1Q8NA66 436 aa28.17■■■□□ 2.1
LTBP3-212ENST00000529189 ZNF594Q96JF6 807 aaPredicted RBP28.17■■■□□ 2.1
LTBP3-212ENST00000529189 MSL1Q68DK7 614 aa28.17■■■□□ 2.1
LTBP3-212ENST00000529189 C3orf67Q6ZVT6 689 aa28.17■■■□□ 2.1
LTBP3-212ENST00000529189 IFIT5Q13325 482 aaKnown RBP28.16■■■□□ 2.1
LTBP3-212ENST00000529189 SLC10A5Q5PT55 438 aa28.16■■■□□ 2.1
LTBP3-212ENST00000529189 ANTXR1Q9H6X2 564 aa28.16■■■□□ 2.1
LTBP3-212ENST00000529189 POLRMTO00411 1230 aaKnown RBP28.15■■■□□ 2.1
LTBP3-212ENST00000529189 SERPINB2P05120 415 aa28.15■■■□□ 2.1
LTBP3-212ENST00000529189 ITGA6P23229 1130 aa28.15■■■□□ 2.1
LTBP3-212ENST00000529189 TNRC6CQ9HCJ0 1690 aaKnown RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms