RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 TMEM87AQ8NBN3 555 aa9.46□□□□□ -0.9
C11orf88-203ENST00000529167 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CPP00450 1065 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 PNMA6AP0CW24 399 aaPredicted RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 TDO2P48775 406 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CCDC183Q5T5S1 534 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 ZGPATQ8N5A5 531 aaKnown RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 C16orf45Q96MC5 204 aaPredicted RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 STK32BQ9NY57 414 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 AKAP12Q02952 1782 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 COL5A2P05997 1499 aaPredicted RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 HSPA6P17066 643 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 C11orf91Q3C1V1 193 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 LARP1Q6PKG0 1096 aaKnown RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CCDC196A0A1B0GTZ2 297 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 HCLS1P14317 486 aaPredicted RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 MX1P20591 662 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CEP135Q66GS9 1140 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 MCTP2Q6DN12 878 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 SMARCE1Q969G3 411 aa9.45□□□□□ -0.9
C11orf88-203ENST00000529167 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
C11orf88-203ENST00000529167 CRB1P82279 1406 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 ATP6V1AP38606 617 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 CCDC96Q2M329 555 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 DZIP1LQ8IYY4 767 aaKnown RBP9.44□□□□□ -0.9
C11orf88-203ENST00000529167 PRAM1Q96QH2 718 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 TOPAZ1Q8N9V7 1692 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 ADGRB1O14514 1584 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 KIF3CO14782 793 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 ELF2Q15723 593 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
C11orf88-203ENST00000529167 SART3Q15020 963 aaKnown RBP9.43□□□□□ -0.9
C11orf88-203ENST00000529167 REXO1L1PQ8IX06 675 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 GTF3C6Q969F1 213 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 KCND1Q9NSA2 647 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 RPS6KA5O75582 802 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 EVA1CP58658 441 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 ST5P78524 1137 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 ZKSCAN2Q63HK3 967 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 PPM1EQ8WY54 764 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 CHAMP1Q96JM3 812 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 TERF2IPQ9NYB0 399 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 KNSTRNQ9Y448 316 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 NHSQ6T4R5 1651 aa9.43□□□□□ -0.9
C11orf88-203ENST00000529167 SLU7O95391 586 aaKnown RBP9.42□□□□□ -0.9
C11orf88-203ENST00000529167 TXNRD1Q16881 649 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 EXOC4Q96A65 974 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 ZNF428Q96B54 188 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 ST18O60284 1047 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 PTGS1P23219 599 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 CLCN6P51797 869 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 NBPF6Q5VWK0 638 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 NBPF5PQ86XG9 351 aaPredicted RBP9.42□□□□□ -0.9
C11orf88-203ENST00000529167 NBPF4Q96M43 638 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 ZBTB40Q9NUA8 1239 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 ELP1O95163 1332 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 CCDC171Q6TFL3 1326 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
C11orf88-203ENST00000529167 ADCY9O60503 1353 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 GPR162Q16538 588 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 ZC3H12AQ5D1E8 599 aaKnown RBP9.42□□□□□ -0.9
C11orf88-203ENST00000529167 MMS22LQ6ZRQ5 1243 aa9.42□□□□□ -0.9
C11orf88-203ENST00000529167 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
C11orf88-203ENST00000529167 TACO1Q9BSH4 297 aaKnown RBP9.42□□□□□ -0.9
C11orf88-203ENST00000529167 CDC45O75419 566 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 IVLP07476 585 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 MAP2K2P36507 400 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 PTF1AQ7RTS3 328 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.41□□□□□ -0.9
C11orf88-203ENST00000529167 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 L2HGDHQ9H9P8 463 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 ATP10DQ9P241 1426 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 GADD45BO75293 160 aaPredicted RBP9.41□□□□□ -0.9
C11orf88-203ENST00000529167 ACTN2P35609 894 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 TMF1P82094 1093 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 ZKSCAN8Q15776 578 aaPredicted RBP9.41□□□□□ -0.9
C11orf88-203ENST00000529167 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 JMYQ8N9B5 988 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 PIK3R5Q8WYR1 880 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 COL18A1P39060 1754 aa9.41□□□□□ -0.9
C11orf88-203ENST00000529167 KLHL33A6NCF5 533 aa9.4□□□□□ -0.9
C11orf88-203ENST00000529167 ZC3H6P61129 1189 aaKnown RBP9.4□□□□□ -0.9
C11orf88-203ENST00000529167 CUL4AQ13619 759 aa9.4□□□□□ -0.9
C11orf88-203ENST00000529167 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.9
C11orf88-203ENST00000529167 WASLO00401 505 aaPredicted RBP9.4□□□□□ -0.9
C11orf88-203ENST00000529167 CALRP27797 417 aaKnown RBP9.4□□□□□ -0.9
C11orf88-203ENST00000529167 TPD52L1Q16890 204 aaPredicted RBP9.4□□□□□ -0.9
C11orf88-203ENST00000529167 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
C11orf88-203ENST00000529167 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
C11orf88-203ENST00000529167 TBC1D22AQ8WUA7 517 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms