RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 EXOC6BQ9Y2D4 811 aa30.77■■■□□ 2.52
LDLRAD3-203ENST00000528989 PARP3Q9Y6F1 533 aa30.77■■■□□ 2.52
LDLRAD3-203ENST00000528989 RFX5P48382 616 aaPredicted RBP30.76■■■□□ 2.52
LDLRAD3-203ENST00000528989 SLC16A10Q8TF71 515 aa30.76■■■□□ 2.51
LDLRAD3-203ENST00000528989 APBB1O00213 710 aa30.74■■■□□ 2.51
LDLRAD3-203ENST00000528989 SMC5Q8IY18 1101 aa30.74■■■□□ 2.51
LDLRAD3-203ENST00000528989 ZNF594Q96JF6 807 aaPredicted RBP30.74■■■□□ 2.51
LDLRAD3-203ENST00000528989 SURF6O75683 361 aaKnown RBP30.74■■■□□ 2.51
LDLRAD3-203ENST00000528989 PTPN12Q05209 780 aaKnown RBP30.74■■■□□ 2.51
LDLRAD3-203ENST00000528989 SKAP1Q86WV1 359 aa30.74■■■□□ 2.51
LDLRAD3-203ENST00000528989 DDX60Q8IY21 1712 aaKnown RBP30.73■■■□□ 2.51
LDLRAD3-203ENST00000528989 ITGA6P23229 1130 aa30.73■■■□□ 2.51
LDLRAD3-203ENST00000528989 SIL1Q9H173 461 aa30.73■■■□□ 2.51
LDLRAD3-203ENST00000528989 ATF5Q9Y2D1 282 aaPredicted RBP30.73■■■□□ 2.51
LDLRAD3-203ENST00000528989 HSP90B1P14625 803 aaKnown RBP30.72■■■□□ 2.51
LDLRAD3-203ENST00000528989 NLRP3Q96P20 1036 aa30.72■■■□□ 2.51
LDLRAD3-203ENST00000528989 ST5P78524 1137 aa30.72■■■□□ 2.51
LDLRAD3-203ENST00000528989 CCDC57Q2TAC2 916 aa30.72■■■□□ 2.51
LDLRAD3-203ENST00000528989 SEC31BQ9NQW1 1179 aa30.72■■■□□ 2.51
LDLRAD3-203ENST00000528989 IFIT5Q13325 482 aaKnown RBP30.71■■■□□ 2.51
LDLRAD3-203ENST00000528989 GCC1Q96CN9 775 aa30.7■■■□□ 2.51
LDLRAD3-203ENST00000528989 BCL11AQ9H165 835 aa30.7■■■□□ 2.51
LDLRAD3-203ENST00000528989 SF3B3Q15393 1217 aaKnown RBP30.7■■■□□ 2.5
LDLRAD3-203ENST00000528989 CCDC152Q4G0S7 254 aa30.7■■■□□ 2.5
LDLRAD3-203ENST00000528989 COPRSQ9NQ92 184 aa30.68■■■□□ 2.5
LDLRAD3-203ENST00000528989 NOP58Q9Y2X3 529 aaKnown RBP30.68■■■□□ 2.5
LDLRAD3-203ENST00000528989 ANKRD45Q5TZF3 282 aa30.67■■■□□ 2.5
LDLRAD3-203ENST00000528989 ANKRD18BA2A2Z9 1011 aa30.66■■■□□ 2.5
LDLRAD3-203ENST00000528989 PUS3Q9BZE2 481 aaKnown RBP30.66■■■□□ 2.5
LDLRAD3-203ENST00000528989 MTFR1LQ9H019 292 aa30.66■■■□□ 2.5
LDLRAD3-203ENST00000528989 PDZRN3Q9UPQ7 1066 aa30.66■■■□□ 2.5
LDLRAD3-203ENST00000528989 SMARCA5O60264 1052 aaPredicted RBP30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 MYH3P11055 1940 aa30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 SRCAPQ6ZRS2 3230 aa30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 CASZ1Q86V15 1759 aa30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 TNRC6CQ9HCJ0 1690 aaKnown RBP30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 LRRC24Q50LG9 513 aa30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.65■■■□□ 2.5
LDLRAD3-203ENST00000528989 TAF7LQ5H9L4 462 aa30.64■■■□□ 2.5
LDLRAD3-203ENST00000528989 BRIP1Q9BX63 1249 aa30.64■■■□□ 2.5
LDLRAD3-203ENST00000528989 LAMB2P55268 1798 aa30.64■■■□□ 2.49
LDLRAD3-203ENST00000528989 GOLGB1Q14789 3259 aaKnown RBP30.63■■■□□ 2.49
LDLRAD3-203ENST00000528989 NRXN2Q9P2S2 1712 aa30.63■■■□□ 2.49
LDLRAD3-203ENST00000528989 NUCB1Q02818 461 aa30.63■■■□□ 2.49
LDLRAD3-203ENST00000528989 G3BP1Q13283 466 aaKnown RBP eCLIP30.63■■■□□ 2.49
LDLRAD3-203ENST00000528989 OS9Q13438 667 aaPredicted RBP30.63■■■□□ 2.49
LDLRAD3-203ENST00000528989 LNPKQ9C0E8 428 aa30.62■■■□□ 2.49
LDLRAD3-203ENST00000528989 COL4A1P02462 1669 aa30.62■■■□□ 2.49
LDLRAD3-203ENST00000528989 SASH1O94885 1247 aa30.61■■■□□ 2.49
LDLRAD3-203ENST00000528989 CRY2Q49AN0 593 aa30.61■■■□□ 2.49
LDLRAD3-203ENST00000528989 ATG9AQ7Z3C6 839 aa30.61■■■□□ 2.49
LDLRAD3-203ENST00000528989 CELF1Q92879 486 aaKnown RBP30.61■■■□□ 2.49
LDLRAD3-203ENST00000528989 RTL9Q8NET4 1388 aa30.61■■■□□ 2.49
LDLRAD3-203ENST00000528989 KLRG2A4D1S0 409 aaPredicted RBP30.6■■■□□ 2.49
LDLRAD3-203ENST00000528989 LDHAL6AQ6ZMR3 332 aa30.6■■■□□ 2.49
LDLRAD3-203ENST00000528989 CHD1LQ86WJ1 897 aa30.6■■■□□ 2.49
LDLRAD3-203ENST00000528989 RHPN1Q8TCX5 695 aa30.6■■■□□ 2.49
LDLRAD3-203ENST00000528989 IL1RAPL2Q9NP60 686 aa30.6■■■□□ 2.49
LDLRAD3-203ENST00000528989 RIC1Q4ADV7 1423 aa30.59■■■□□ 2.49
LDLRAD3-203ENST00000528989 EYA2O00167 538 aa30.59■■■□□ 2.49
LDLRAD3-203ENST00000528989 C16orf71Q8IYS4 520 aaPredicted RBP30.59■■■□□ 2.49
LDLRAD3-203ENST00000528989 LRRCC1Q9C099 1032 aa30.59■■■□□ 2.49
LDLRAD3-203ENST00000528989 RAB11FIP3O75154 756 aa30.58■■■□□ 2.49
LDLRAD3-203ENST00000528989 HSP90AB4PQ58FF6 505 aa30.58■■■□□ 2.49
LDLRAD3-203ENST00000528989 DDX46Q7L014 1031 aaKnown RBP30.58■■■□□ 2.49
LDLRAD3-203ENST00000528989 TAF1P21675 1872 aa30.57■■■□□ 2.48
LDLRAD3-203ENST00000528989 RPGRQ92834 1020 aaKnown RBP30.57■■■□□ 2.48
LDLRAD3-203ENST00000528989 SGIP1Q9BQI5 828 aa30.57■■■□□ 2.48
LDLRAD3-203ENST00000528989 RIPOR2Q9Y4F9 1068 aa30.57■■■□□ 2.48
LDLRAD3-203ENST00000528989 KIF1BPQ96EK5 621 aa30.56■■■□□ 2.48
LDLRAD3-203ENST00000528989 CDC5LQ99459 802 aaKnown RBP30.56■■■□□ 2.48
LDLRAD3-203ENST00000528989 ANKRD31Q8N7Z5 1873 aa30.56■■■□□ 2.48
LDLRAD3-203ENST00000528989 POLD1P28340 1107 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 PDE6BP35913 854 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 TFCP2Q12800 502 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 MPHOSPH8Q99549 860 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 CNNM1Q9NRU3 951 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 SRGNP10124 158 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 PDE4AP27815 886 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 PTGER2P43116 358 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 SLC51AQ86UW1 340 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 ANKRD18AQ8IVF6 992 aa30.55■■■□□ 2.48
LDLRAD3-203ENST00000528989 CIAO1O76071 339 aa30.54■■■□□ 2.48
LDLRAD3-203ENST00000528989 IGHMBP2P38935 993 aaKnown RBP30.54■■■□□ 2.48
LDLRAD3-203ENST00000528989 RPS8P62241 208 aaKnown RBP30.54■■■□□ 2.48
LDLRAD3-203ENST00000528989 IL15P40933 162 aaPredicted RBP30.53■■■□□ 2.48
LDLRAD3-203ENST00000528989 OTUD7AQ8TE49 926 aaPredicted RBP30.53■■■□□ 2.48
LDLRAD3-203ENST00000528989 CHRNA5P30532 468 aa30.53■■■□□ 2.48
LDLRAD3-203ENST00000528989 ERC1Q8IUD2 1116 aa30.53■■■□□ 2.48
LDLRAD3-203ENST00000528989 RGS3P49796 1198 aa30.52■■■□□ 2.48
LDLRAD3-203ENST00000528989 HOXA10P31260 410 aaPredicted RBP30.51■■■□□ 2.47
LDLRAD3-203ENST00000528989 HELBQ8NG08 1087 aaPredicted RBP30.51■■■□□ 2.47
LDLRAD3-203ENST00000528989 RBM17Q96I25 401 aaKnown RBP30.51■■■□□ 2.47
LDLRAD3-203ENST00000528989 ZBTB47Q9UFB7 747 aaPredicted RBP30.51■■■□□ 2.47
LDLRAD3-203ENST00000528989 GRAPQ13588 217 aa30.5■■■□□ 2.47
LDLRAD3-203ENST00000528989 C2CD5Q86YS7 1000 aa30.5■■■□□ 2.47
LDLRAD3-203ENST00000528989 GRAPLQ8TC17 118 aaPredicted RBP30.5■■■□□ 2.47
LDLRAD3-203ENST00000528989 FBXO3Q9UK99 471 aa30.5■■■□□ 2.47
LDLRAD3-203ENST00000528989 BSDC1Q9NW68 430 aaPredicted RBP30.5■■■□□ 2.47
LDLRAD3-203ENST00000528989 C10orf71Q711Q0 1435 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 350.9 ms