RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 NPR1P16066 1061 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 KCNA3P22001 575 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 FOXO4P98177 505 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 RABL6Q3YEC7 729 aaPredicted RBP18.1■□□□□ 0.49
UBXN1-209ENST00000528907 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
UBXN1-209ENST00000528907 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 JARID2Q92833 1246 aaPredicted RBP18.1■□□□□ 0.49
UBXN1-209ENST00000528907 MASTLQ96GX5 879 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 MEIS3Q99687 375 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 CTSWP56202 376 aa18.09■□□□□ 0.49
UBXN1-209ENST00000528907 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
UBXN1-209ENST00000528907 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
UBXN1-209ENST00000528907 TTLL11Q8NHH1 800 aa18.09■□□□□ 0.49
UBXN1-209ENST00000528907 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
UBXN1-209ENST00000528907 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
UBXN1-209ENST00000528907 DPEP1P16444 411 aa18.08■□□□□ 0.48
UBXN1-209ENST00000528907 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.48
UBXN1-209ENST00000528907 CRAMP1Q96RY5 1269 aa18.08■□□□□ 0.48
UBXN1-209ENST00000528907 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
UBXN1-209ENST00000528907 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
UBXN1-209ENST00000528907 ARFGEF1Q9Y6D6 1849 aa18.07■□□□□ 0.48
UBXN1-209ENST00000528907 GNAI2P04899 355 aa18.06■□□□□ 0.48
UBXN1-209ENST00000528907 CHRNA5P30532 468 aa18.06■□□□□ 0.48
UBXN1-209ENST00000528907 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
UBXN1-209ENST00000528907 MTX1Q13505 466 aa18.06■□□□□ 0.48
UBXN1-209ENST00000528907 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
UBXN1-209ENST00000528907 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
UBXN1-209ENST00000528907 ZBTB40Q9NUA8 1239 aa18.06■□□□□ 0.48
UBXN1-209ENST00000528907 A0A0G2JLW4 131 aa18.05■□□□□ 0.48
UBXN1-209ENST00000528907 AAMPQ13685 434 aa18.05■□□□□ 0.48
UBXN1-209ENST00000528907 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
UBXN1-209ENST00000528907 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
UBXN1-209ENST00000528907 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
UBXN1-209ENST00000528907 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
UBXN1-209ENST00000528907 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
UBXN1-209ENST00000528907 PIM2Q9P1W9 311 aa18.05■□□□□ 0.48
UBXN1-209ENST00000528907 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
UBXN1-209ENST00000528907 CACNA1SQ13698 1873 aa18.04■□□□□ 0.48
UBXN1-209ENST00000528907 LMBR1LQ6UX01 489 aa18.04■□□□□ 0.48
UBXN1-209ENST00000528907 DDX46Q7L014 1031 aaKnown RBP18.04■□□□□ 0.48
UBXN1-209ENST00000528907 LRRFIP2Q9Y608 721 aaKnown RBP18.04■□□□□ 0.48
UBXN1-209ENST00000528907 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
UBXN1-209ENST00000528907 GRAPQ13588 217 aa18.03■□□□□ 0.48
UBXN1-209ENST00000528907 TMC4Q7Z404 712 aa18.03■□□□□ 0.48
UBXN1-209ENST00000528907 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
UBXN1-209ENST00000528907 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
UBXN1-209ENST00000528907 GREM2Q9H772 168 aa18.03■□□□□ 0.48
UBXN1-209ENST00000528907 SLX4Q8IY92 1834 aa18.02■□□□□ 0.48
UBXN1-209ENST00000528907 BBOX1O75936 387 aa18.02■□□□□ 0.48
UBXN1-209ENST00000528907 TAF1P21675 1872 aa18.02■□□□□ 0.48
UBXN1-209ENST00000528907 ZNF622Q969S3 477 aaKnown RBP eCLIP18.02■□□□□ 0.48
UBXN1-209ENST00000528907 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
UBXN1-209ENST00000528907 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
UBXN1-209ENST00000528907 COL4A1P02462 1669 aa18.01■□□□□ 0.47
UBXN1-209ENST00000528907 ANKRD18BA2A2Z9 1011 aa18■□□□□ 0.47
UBXN1-209ENST00000528907 GRIN3BO60391 1043 aa18■□□□□ 0.47
UBXN1-209ENST00000528907 ITGA6P23229 1130 aa18■□□□□ 0.47
UBXN1-209ENST00000528907 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
UBXN1-209ENST00000528907 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
UBXN1-209ENST00000528907 C7orf43Q8WVR3 580 aa18■□□□□ 0.47
UBXN1-209ENST00000528907 CRBNQ96SW2 442 aa18■□□□□ 0.47
UBXN1-209ENST00000528907 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
UBXN1-209ENST00000528907 RFX5P48382 616 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-209ENST00000528907 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
UBXN1-209ENST00000528907 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
UBXN1-209ENST00000528907 CCDC57Q2TAC2 916 aa17.99■□□□□ 0.47
UBXN1-209ENST00000528907 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
UBXN1-209ENST00000528907 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
UBXN1-209ENST00000528907 RPAP2Q8IXW5 612 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-209ENST00000528907 CELF1Q92879 486 aaKnown RBP17.99■□□□□ 0.47
UBXN1-209ENST00000528907 SNED1Q8TER0 1413 aa17.98■□□□□ 0.47
UBXN1-209ENST00000528907 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
UBXN1-209ENST00000528907 ANKRD18AQ8IVF6 992 aa17.98■□□□□ 0.47
UBXN1-209ENST00000528907 SP8Q8IXZ3 490 aa17.98■□□□□ 0.47
UBXN1-209ENST00000528907 FBXO3Q9UK99 471 aa17.98■□□□□ 0.47
UBXN1-209ENST00000528907 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
UBXN1-209ENST00000528907 A0A1B0GUL6 1792 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 PPEF1O14829 653 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-209ENST00000528907 POLA2Q14181 598 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 SSH3Q8TE77 659 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 CCDC85AQ96PX6 553 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-209ENST00000528907 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-209ENST00000528907 ATP6V0A2Q9Y487 856 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 FER1L6Q2WGJ9 1857 aa17.97■□□□□ 0.47
UBXN1-209ENST00000528907 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
UBXN1-209ENST00000528907 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
UBXN1-209ENST00000528907 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
UBXN1-209ENST00000528907 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.47
UBXN1-209ENST00000528907 SRGAP3O43295 1099 aa17.95■□□□□ 0.46
UBXN1-209ENST00000528907 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
UBXN1-209ENST00000528907 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
UBXN1-209ENST00000528907 PNMA6EA0A0J9YXQ4 647 aa17.94■□□□□ 0.46
UBXN1-209ENST00000528907 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
UBXN1-209ENST00000528907 CIAO1O76071 339 aa17.93■□□□□ 0.46
UBXN1-209ENST00000528907 HSPA6P17066 643 aa17.93■□□□□ 0.46
UBXN1-209ENST00000528907 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms