RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
GEN1-204ENST00000528873 RARAP10276 462 aa8.34□□□□□ -1.07
GEN1-204ENST00000528873 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
GEN1-204ENST00000528873 PCSK7Q16549 785 aa8.34□□□□□ -1.07
GEN1-204ENST00000528873 ETFBKMTQ8IXQ9 262 aa8.34□□□□□ -1.07
GEN1-204ENST00000528873 NUDT8Q8WV74 236 aa8.34□□□□□ -1.07
GEN1-204ENST00000528873 XYLBO75191 536 aa8.33□□□□□ -1.08
GEN1-204ENST00000528873 PRRT3Q5FWE3 981 aa8.33□□□□□ -1.08
GEN1-204ENST00000528873 DHX32Q7L7V1 743 aaKnown RBP8.33□□□□□ -1.08
GEN1-204ENST00000528873 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
GEN1-204ENST00000528873 RGS9O75916 674 aaPredicted RBP8.32□□□□□ -1.08
GEN1-204ENST00000528873 EGFRP00533 1210 aa8.32□□□□□ -1.08
GEN1-204ENST00000528873 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
GEN1-204ENST00000528873 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
GEN1-204ENST00000528873 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
GEN1-204ENST00000528873 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
GEN1-204ENST00000528873 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
GEN1-204ENST00000528873 JPH1Q9HDC5 661 aaPredicted RBP8.32□□□□□ -1.08
GEN1-204ENST00000528873 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 TNFRSF10BO14763 440 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 PROCP04070 461 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 NID1P14543 1247 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 CPB1P15086 417 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
GEN1-204ENST00000528873 CD163Q86VB7 1156 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 FAM13BQ9NYF5 915 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 STIM2Q9P246 746 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 KCNMB2Q9Y691 235 aa8.31□□□□□ -1.08
GEN1-204ENST00000528873 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
GEN1-204ENST00000528873 TRPM4Q8TD43 1214 aa8.3□□□□□ -1.08
GEN1-204ENST00000528873 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
GEN1-204ENST00000528873 SEPT3Q9UH03 358 aa8.3□□□□□ -1.08
GEN1-204ENST00000528873 NAGPAQ9UK23 515 aa8.3□□□□□ -1.08
GEN1-204ENST00000528873 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
GEN1-204ENST00000528873 CHRNA4P43681 627 aa8.29□□□□□ -1.08
GEN1-204ENST00000528873 ZBTB39O15060 712 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 APBA3O96018 575 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 PSAPP07602 524 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 ZAP70P43403 619 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
GEN1-204ENST00000528873 NRLP54845 237 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 GPLD1P80108 840 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 SUZ12Q15022 739 aaKnown RBP8.28□□□□□ -1.08
GEN1-204ENST00000528873 ELMSAN1Q6PJG2 1045 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
GEN1-204ENST00000528873 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 MMP20O60882 483 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 PLAURQ03405 335 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 ABTB2Q8N961 1025 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 GPR152Q8TDT2 470 aa8.27□□□□□ -1.09
GEN1-204ENST00000528873 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
GEN1-204ENST00000528873 SSFA2P28290 1259 aa8.26□□□□□ -1.09
GEN1-204ENST00000528873 SCNN1AP37088 669 aa8.26□□□□□ -1.09
GEN1-204ENST00000528873 BAG6P46379 1132 aa8.26□□□□□ -1.09
GEN1-204ENST00000528873 DMRTC2Q8IXT2 367 aaPredicted RBP8.26□□□□□ -1.09
GEN1-204ENST00000528873 LPIN3Q9BQK8 851 aa8.26□□□□□ -1.09
GEN1-204ENST00000528873 FRRS1LQ9P0K9 344 aa8.26□□□□□ -1.09
GEN1-204ENST00000528873 LOC102724428A0A0B4J2F2 783 aa8.25□□□□□ -1.09
GEN1-204ENST00000528873 J3QW42 95 aa8.25□□□□□ -1.09
GEN1-204ENST00000528873 SIK1P57059 783 aa8.25□□□□□ -1.09
GEN1-204ENST00000528873 TRIP4Q15650 581 aaPredicted RBP8.25□□□□□ -1.09
GEN1-204ENST00000528873 GRIK4Q16099 956 aa8.25□□□□□ -1.09
GEN1-204ENST00000528873 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
GEN1-204ENST00000528873 EIF2AK2P19525 551 aaKnown RBP8.24□□□□□ -1.09
GEN1-204ENST00000528873 GATA4P43694 442 aa8.24□□□□□ -1.09
GEN1-204ENST00000528873 RAC1P63000 192 aa8.24□□□□□ -1.09
GEN1-204ENST00000528873 TTC9Q92623 222 aa8.24□□□□□ -1.09
GEN1-204ENST00000528873 NACC1Q96RE7 527 aa8.24□□□□□ -1.09
GEN1-204ENST00000528873 SMG9Q9H0W8 520 aaKnown RBP8.24□□□□□ -1.09
GEN1-204ENST00000528873 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
GEN1-204ENST00000528873 GHRHP01286 108 aa8.23□□□□□ -1.09
GEN1-204ENST00000528873 TTC39BQ5VTQ0 682 aaPredicted RBP8.23□□□□□ -1.09
GEN1-204ENST00000528873 MSL1Q68DK7 614 aa8.23□□□□□ -1.09
GEN1-204ENST00000528873 NSUN5Q96P11 429 aaKnown RBP8.23□□□□□ -1.09
GEN1-204ENST00000528873 SUPT5HO00267 1087 aaKnown RBP8.22□□□□□ -1.09
GEN1-204ENST00000528873 FURINP09958 794 aa8.22□□□□□ -1.09
GEN1-204ENST00000528873 SOX18P35713 384 aa8.22□□□□□ -1.09
GEN1-204ENST00000528873 GRIK5Q16478 980 aa8.22□□□□□ -1.09
GEN1-204ENST00000528873 ATCAYQ86WG3 371 aa8.22□□□□□ -1.09
GEN1-204ENST00000528873 HELQQ8TDG4 1101 aa8.22□□□□□ -1.09
GEN1-204ENST00000528873 GTF3C2Q8WUA4 911 aaPredicted RBP8.22□□□□□ -1.09
GEN1-204ENST00000528873 RBSNQ9H1K0 784 aa8.22□□□□□ -1.09
GEN1-204ENST00000528873 ELNP15502 786 aa8.21□□□□□ -1.1
GEN1-204ENST00000528873 DOC2BQ14184 412 aa8.21□□□□□ -1.1
GEN1-204ENST00000528873 NOM1Q5C9Z4 860 aaKnown RBP8.21□□□□□ -1.1
GEN1-204ENST00000528873 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
GEN1-204ENST00000528873 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
GEN1-204ENST00000528873 NUDT16Q96DE0 195 aaKnown RBP8.21□□□□□ -1.1
GEN1-204ENST00000528873 ARID3AQ99856 593 aa8.21□□□□□ -1.1
GEN1-204ENST00000528873 C9orf172C9J069 976 aa8.2□□□□□ -1.1
GEN1-204ENST00000528873 ADAM23O75077 832 aa8.2□□□□□ -1.1
GEN1-204ENST00000528873 HOXD8P13378 290 aaPredicted RBP8.2□□□□□ -1.1
GEN1-204ENST00000528873 ILDR2Q71H61 639 aa8.2□□□□□ -1.1
GEN1-204ENST00000528873 OR13H1Q8NG92 308 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms