RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	MASTL	Q96GX5	879 aa		9.87	□□□□□ -0.83
MS4A6A-208	ENST00000528851	SCN7A	Q01118	1682 aa		9.87	□□□□□ -0.83
MS4A6A-208	ENST00000528851	SH3TC1	Q8TE82	1336 aa		9.87	□□□□□ -0.83
MS4A6A-208	ENST00000528851	NRXN2	Q9P2S2	1712 aa		9.87	□□□□□ -0.83
MS4A6A-208	ENST00000528851	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	LINS1	Q8NG48	757 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	CWC25	Q9NXE8	425 aa	Predicted RBP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	PTPRC	P08575	1304 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	PXDNL	A1KZ92	1463 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	ADCY9	O60503	1353 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	PCCA	P05165	728 aa	Predicted RBP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	YBX3	P16989	372 aa	Known RBP eCLIP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	HOXA10	P31260	410 aa	Predicted RBP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	RARS	P54136	660 aa	Known RBP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	CRY2	Q49AN0	593 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	ZNF622	Q969S3	477 aa	Known RBP eCLIP	9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	BCS1L	Q9Y276	419 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	BCOR	Q6W2J9	1755 aa		9.86	□□□□□ -0.83
MS4A6A-208	ENST00000528851	RIC1	Q4ADV7	1423 aa		9.85	□□□□□ -0.83
MS4A6A-208	ENST00000528851	IGKV5-2	P06315	115 aa		9.85	□□□□□ -0.83
MS4A6A-208	ENST00000528851	FAM89A	Q96GI7	184 aa		9.85	□□□□□ -0.83
MS4A6A-208	ENST00000528851	RBM17	Q96I25	401 aa	Known RBP	9.85	□□□□□ -0.83
MS4A6A-208	ENST00000528851	CRAMP1	Q96RY5	1269 aa		9.85	□□□□□ -0.83
MS4A6A-208	ENST00000528851	NEURL1B	A8MQ27	555 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851		H7C1W4	665 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	SNPH	O15079	494 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	SF3B3	Q15393	1217 aa	Known RBP	9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	BEND3	Q5T5X7	828 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	ARHGAP45	Q92619	1136 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	SMC4	Q9NTJ3	1288 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	KIF13B	Q9NQT8	1826 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	IRS4	O14654	1257 aa	Predicted RBP	9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	ALDH1L1	O75891	902 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	SPNS2	Q8IVW8	549 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	CDHR2	Q9BYE9	1310 aa		9.84	□□□□□ -0.83
MS4A6A-208	ENST00000528851	NUP98	P52948	1817 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851		F6X3S4	739 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	IPO8	O15397	1037 aa	Known RBP	9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	PDE8A	O60658	829 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	BBOX1	O75936	387 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	HCLS1	P14317	486 aa	Predicted RBP	9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	GCKR	Q14397	625 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	SOGA3	Q5TF21	947 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	SYNE4	Q8N205	404 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	RPGR	Q92834	1020 aa	Known RBP	9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	API5	Q9BZZ5	524 aa	Known RBP	9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	SRCIN1	Q9C0H9	1055 aa		9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	NOB1	Q9ULX3	412 aa	Known RBP	9.83	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CWF19L2	Q2TBE0	894 aa	Known RBP	9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	GRIPAP1	Q4V328	841 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CC2D2B	Q6DHV5	1058 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	ARHGAP27	Q6ZUM4	889 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	C7orf43	Q8WVR3	580 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	AFDN	P55196	1824 aa	Known RBP	9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	DDX46	Q7L014	1031 aa	Known RBP	9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	PLA2G12B	Q9BX93	195 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	BCL2L13	Q9BXK5	485 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	WWC3	Q9ULE0	1092 aa		9.82	□□□□□ -0.84
MS4A6A-208	ENST00000528851	ABCC12	Q96J65	1359 aa		9.81	□□□□□ -0.84
MS4A6A-208	ENST00000528851	RTL5	Q5HYW3	569 aa	Predicted RBP	9.81	□□□□□ -0.84
MS4A6A-208	ENST00000528851	PRPF40B	Q6NWY9	871 aa	Known RBP	9.81	□□□□□ -0.84
MS4A6A-208	ENST00000528851	SLC4A10	Q6U841	1118 aa		9.81	□□□□□ -0.84
MS4A6A-208	ENST00000528851	KIF16B	Q96L93	1317 aa		9.81	□□□□□ -0.84
MS4A6A-208	ENST00000528851	C21orf2	O43822	256 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	PLCG2	P16885	1265 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CASP7	P55210	303 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	C3orf67	Q6ZVT6	689 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	TMC4	Q7Z404	712 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	RASEF	Q8IZ41	740 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	TMX4	Q9H1E5	349 aa	Predicted RBP	9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	C9orf78	Q9NZ63	289 aa	Predicted RBP	9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CACNA1F	O60840	1977 aa		9.8	□□□□□ -0.84
MS4A6A-208	ENST00000528851	BCAR3	O75815	825 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CSF1R	P07333	972 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CCT4	P50991	539 aa	Known RBP	9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	GRAP	Q13588	217 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CCDC152	Q4G0S7	254 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	SP8	Q8IXZ3	490 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	RTKN2	Q8IZC4	609 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	GRAPL	Q8TC17	118 aa	Predicted RBP	9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	JARID2	Q92833	1246 aa	Predicted RBP	9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	UTY	O14607	1347 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	GRM8	O00222	908 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	RPS8	P62241	208 aa	Known RBP	9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CCDC93	Q567U6	631 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	UBE3B	Q7Z3V4	1068 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	TTLL11	Q8NHH1	800 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	HDAC5	Q9UQL6	1122 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	ATP6V0A2	Q9Y487	856 aa		9.79	□□□□□ -0.84
MS4A6A-208	ENST00000528851	LTBP3	Q9NS15	1303 aa		9.78	□□□□□ -0.84
MS4A6A-208	ENST00000528851	ZKSCAN2	Q63HK3	967 aa		9.78	□□□□□ -0.84
MS4A6A-208	ENST00000528851	ATF7IP	Q6VMQ6	1270 aa		9.78	□□□□□ -0.84
MS4A6A-208	ENST00000528851	PCDHB13	Q9Y5F0	798 aa		9.78	□□□□□ -0.84
MS4A6A-208	ENST00000528851	KIAA1551	Q9HCM1	1747 aa		9.78	□□□□□ -0.84
MS4A6A-208	ENST00000528851	CTSW	P56202	376 aa		9.77	□□□□□ -0.84
MS4A6A-208	ENST00000528851	INTS3	Q68E01	1043 aa	Known RBP	9.77	□□□□□ -0.84
MS4A6A-208	ENST00000528851	VPS33B	Q9H267	617 aa		9.77	□□□□□ -0.84
MS4A6A-208	ENST00000528851	N4BP2	Q86UW6	1770 aa	Predicted RBP	9.77	□□□□□ -0.85
MS4A6A-208	ENST00000528851	ABCC4	O15439	1325 aa		9.77	□□□□□ -0.85
MS4A6A-208	ENST00000528851	ANKRD31	Q8N7Z5	1873 aa		9.77	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms