RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 CDK2AP1O14519 115 aa12.29□□□□□ -0.44
COMMD9-205ENST00000528608 GDF11O95390 407 aa12.29□□□□□ -0.44
COMMD9-205ENST00000528608 ATP4AP20648 1035 aa12.29□□□□□ -0.44
COMMD9-205ENST00000528608 IRS1P35568 1242 aa12.29□□□□□ -0.44
COMMD9-205ENST00000528608 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
COMMD9-205ENST00000528608 ABHD17AQ96GS6 310 aa12.29□□□□□ -0.44
COMMD9-205ENST00000528608 OXCT2Q9BYC2 517 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-205ENST00000528608 RPRD2Q5VT52 1461 aaKnown RBP12.28□□□□□ -0.44
COMMD9-205ENST00000528608 UGGT1Q9NYU2 1555 aa12.28□□□□□ -0.44
COMMD9-205ENST00000528608 FIGNL1Q6PIW4 674 aa12.28□□□□□ -0.44
COMMD9-205ENST00000528608 TRIM50Q86XT4 487 aa12.28□□□□□ -0.44
COMMD9-205ENST00000528608 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
COMMD9-205ENST00000528608 CLUAP1Q96AJ1 413 aa12.28□□□□□ -0.44
COMMD9-205ENST00000528608 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
COMMD9-205ENST00000528608 IQSEC3Q9UPP2 1182 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-205ENST00000528608 USP3Q9Y6I4 520 aa12.28□□□□□ -0.44
COMMD9-205ENST00000528608 PIK3C2BO00750 1634 aa12.27□□□□□ -0.44
COMMD9-205ENST00000528608 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
COMMD9-205ENST00000528608 RAB3GAP2Q9H2M9 1393 aa12.27□□□□□ -0.45
COMMD9-205ENST00000528608 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 USP17L3A6NCW0 530 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 USP17L4A6NCW7 530 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 BMP4P12644 408 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 FGFR3P22607 806 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 ARSJQ5FYB0 599 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-205ENST00000528608 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 USP17L1Q7RTZ2 530 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-205ENST00000528608 PLEKHM2Q8IWE5 1019 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 ZNF295-AS1Q8N0V1 137 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 THEMISQ8N1K5 641 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-205ENST00000528608 UCN2Q96RP3 112 aa12.26□□□□□ -0.45
COMMD9-205ENST00000528608 BNIP3LO60238 219 aa12.25□□□□□ -0.45
COMMD9-205ENST00000528608 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
COMMD9-205ENST00000528608 NLRP8Q86W28 1048 aa12.25□□□□□ -0.45
COMMD9-205ENST00000528608 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
COMMD9-205ENST00000528608 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
COMMD9-205ENST00000528608 PLA2R1Q13018 1463 aa12.25□□□□□ -0.45
COMMD9-205ENST00000528608 PTPRTO14522 1441 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 OIP5O43482 229 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 ATP9BO43861 1147 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 ATP1A2P50993 1020 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 PODNQ7Z5L7 613 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 KLRG1Q96E93 195 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 ZCCHC2Q9C0B9 1178 aaKnown RBP12.24□□□□□ -0.45
COMMD9-205ENST00000528608 NDFIP2Q9NV92 336 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 DNAAF2Q9NVR5 837 aaKnown RBP12.24□□□□□ -0.45
COMMD9-205ENST00000528608 SLC52A1Q9NWF4 448 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
COMMD9-205ENST00000528608 SCHIP1Q9P0W5 487 aaPredicted RBP12.24□□□□□ -0.45
COMMD9-205ENST00000528608 A0A1W2PNR3 127 aa12.23□□□□□ -0.45
COMMD9-205ENST00000528608 TPCN2Q8NHX9 752 aa12.23□□□□□ -0.45
COMMD9-205ENST00000528608 MPHOSPH9Q99550 1183 aa12.23□□□□□ -0.45
COMMD9-205ENST00000528608 PCDHGC4Q9Y5F7 938 aa12.23□□□□□ -0.45
COMMD9-205ENST00000528608 PARP3Q9Y6F1 533 aa12.23□□□□□ -0.45
COMMD9-205ENST00000528608 LTKP29376 864 aa12.22□□□□□ -0.45
COMMD9-205ENST00000528608 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
COMMD9-205ENST00000528608 GDF2Q9UK05 429 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-205ENST00000528608 GJA3Q9Y6H8 435 aa12.22□□□□□ -0.45
COMMD9-205ENST00000528608 SPHKAPQ2M3C7 1700 aa12.22□□□□□ -0.45
COMMD9-205ENST00000528608 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
COMMD9-205ENST00000528608 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.45
COMMD9-205ENST00000528608 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.45
COMMD9-205ENST00000528608 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.45
COMMD9-205ENST00000528608 ATXN7O15265 892 aaPredicted RBP12.21□□□□□ -0.45
COMMD9-205ENST00000528608 BICDL1Q6ZP65 573 aa12.21□□□□□ -0.45
COMMD9-205ENST00000528608 KIAA1024Q9UPX6 916 aa12.21□□□□□ -0.45
COMMD9-205ENST00000528608 ADGRB3O60242 1522 aa12.21□□□□□ -0.46
COMMD9-205ENST00000528608 TMEM2Q9UHN6 1383 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 DCDC2BA2VCK2 349 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 CTBSQ01459 385 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 CCDC102BQ68D86 513 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 SLC9A9Q8IVB4 645 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 GLMNQ92990 594 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 SLIT1O75093 1534 aa12.2□□□□□ -0.46
COMMD9-205ENST00000528608 POLR1AO95602 1720 aaPredicted RBP12.2□□□□□ -0.46
COMMD9-205ENST00000528608 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
COMMD9-205ENST00000528608 CNTNAP5Q8WYK1 1306 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 CLDN10P78369 228 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
COMMD9-205ENST00000528608 BEND7Q8N7W2 519 aaPredicted RBP12.19□□□□□ -0.46
COMMD9-205ENST00000528608 GALNT6Q8NCL4 622 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 ZIC5Q96T25 663 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
COMMD9-205ENST00000528608 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
COMMD9-205ENST00000528608 TRPM2O94759 1503 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 C2CD2LO14523 706 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 EPHA4P54764 986 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 FOXK2Q01167 660 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 TBCELQ5QJ74 424 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 ZDHHC1Q8WTX9 485 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 ZNF232Q9UNY5 417 aa12.18□□□□□ -0.46
COMMD9-205ENST00000528608 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
COMMD9-205ENST00000528608 MED14O60244 1454 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms