RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ARXQ96QS3 562 aa17.8■□□□□ 0.44
ECHDC1-220ENST00000528402 PALD1Q9ULE6 856 aa17.8■□□□□ 0.44
ECHDC1-220ENST00000528402 CCDC171Q6TFL3 1326 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 LOC102724428A0A0B4J2F2 783 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 RGL2O15211 777 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 SIK1P57059 783 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 LRRFIP1Q32MZ4 808 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 ZNF34Q8IZ26 560 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 MAP4K1Q92918 833 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 IL25Q9H293 177 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 SNX14Q9Y5W7 946 aa17.79■□□□□ 0.44
ECHDC1-220ENST00000528402 SPEF2Q9C093 1822 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 GOLGA6L22H0YM25 854 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 PSMA5P28066 241 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 NMIQ13287 307 aaPredicted RBP17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 HLFQ16534 295 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 PARP10Q53GL7 1025 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 FNBP4Q8N3X1 1017 aaPredicted RBP17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 DBNDD2Q9BQY9 259 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 RREB1Q92766 1687 aa17.78■□□□□ 0.44
ECHDC1-220ENST00000528402 MYH3P11055 1940 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 PDE8AO60658 829 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 NECTIN1Q15223 517 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 FAM89AQ96GI7 184 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 NGLY1Q96IV0 654 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 NEUROD6Q96NK8 337 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 HMG20BQ9P0W2 317 aa17.77■□□□□ 0.44
ECHDC1-220ENST00000528402 ANKRD18BA2A2Z9 1011 aa17.76■□□□□ 0.43
ECHDC1-220ENST00000528402 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
ECHDC1-220ENST00000528402 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
ECHDC1-220ENST00000528402 KBTBD3Q8NAB2 608 aa17.76■□□□□ 0.43
ECHDC1-220ENST00000528402 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
ECHDC1-220ENST00000528402 ZNF609O15014 1411 aa17.76■□□□□ 0.43
ECHDC1-220ENST00000528402 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 TSGA10IPQ3SY00 556 aa17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 TTLL11Q8NHH1 800 aa17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
ECHDC1-220ENST00000528402 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 KCNJ4P48050 445 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 CTSWP56202 376 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 LRRC24Q50LG9 513 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 HELLSQ9NRZ9 838 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
ECHDC1-220ENST00000528402 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 A0A1B0GUL7 405 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 PTH1RQ03431 593 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 KRT32Q14532 448 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 FAM227BQ96M60 508 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 TTC14Q96N46 770 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 ALDH8A1Q9H2A2 487 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 ZNF652Q9Y2D9 606 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
ECHDC1-220ENST00000528402 IFIT1P09914 478 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 GPTP24298 496 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 TIMM10P62072 90 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 USPL1Q5W0Q7 1092 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 CREB3L3Q68CJ9 461 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 CLEC4GQ6UXB4 293 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 ITGA6P23229 1130 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 SSFA2P28290 1259 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 DNAJC2Q99543 621 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 UTP14AQ9BVJ6 771 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 RIPOR2Q9Y4F9 1068 aa17.72■□□□□ 0.43
ECHDC1-220ENST00000528402 A0A0D9SFI3 127 aa17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 TRAK2O60296 914 aa17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 TAF5LO75529 589 aa17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 GORABQ5T7V8 394 aa17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 LDHAL6AQ6ZMR3 332 aa17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 PUS3Q9BZE2 481 aaKnown RBP17.71■□□□□ 0.43
ECHDC1-220ENST00000528402 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms