RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
SF3B2-206ENST00000528302 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 BRF1Q92994 677 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 IGSF1Q8N6C5 1336 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 USP27XA6NNY8 438 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-206ENST00000528302 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 STK11IPQ8N1F8 1099 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 ZSWIM6Q9HCJ5 1215 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 SMAP1Q8IYB5 467 aaPredicted RBP11.66□□□□□ -0.54
SF3B2-206ENST00000528302 NCOA5Q9HCD5 579 aaKnown RBP11.66□□□□□ -0.54
SF3B2-206ENST00000528302 GOLGA6L19H0YKK7 550 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 SASH1O94885 1247 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 TMEM87AQ8NBN3 555 aa11.66□□□□□ -0.54
SF3B2-206ENST00000528302 CACTINQ8WUQ7 758 aaKnown RBP11.66□□□□□ -0.54
SF3B2-206ENST00000528302 C3P01024 1663 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 BECN2A8MW95 431 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 BIN1O00499 593 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
SF3B2-206ENST00000528302 NECTIN1Q15223 517 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 LEO1Q8WVC0 666 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-206ENST00000528302 PGBD1Q96JS3 809 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 SBNO1A3KN83 1393 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 ADRA2BP18089 450 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 MON2Q7Z3U7 1717 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
SF3B2-206ENST00000528302 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 ARHGEF10O15013 1369 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 TECPR2O15040 1411 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 SSH2Q76I76 1423 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 HSP90AB4PQ58FF6 505 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 Q6ZUG5 572 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 C11orf57Q6ZUT1 292 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-206ENST00000528302 SH2B1Q9NRF2 756 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-206ENST00000528302 ZSCAN25Q6NSZ9 544 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 ZSCAN31Q96LW9 406 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-206ENST00000528302 SPTLC3Q9NUV7 552 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
SF3B2-206ENST00000528302 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 CCDC85AQ96PX6 553 aaPredicted RBP11.63□□□□□ -0.55
SF3B2-206ENST00000528302 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
SF3B2-206ENST00000528302 ERICH4A6NGS2 130 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 ZNF75DP51815 510 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
SF3B2-206ENST00000528302 HSP90AB3PQ58FF7 597 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 C1orf141Q5JVX7 400 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 EPHA10Q5JZY3 1008 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 MYD88Q99836 296 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 TTC21AQ8NDW8 1320 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 AKAP12Q02952 1782 aa11.63□□□□□ -0.55
SF3B2-206ENST00000528302 NCBP1Q09161 790 aaKnown RBP11.62□□□□□ -0.55
SF3B2-206ENST00000528302 HSP90AA4PQ58FG1 418 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 PSMA5P28066 241 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 ME1P48163 572 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 APOBRQ0VD83 1088 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 CHRNA2Q15822 529 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 GJB4Q9NTQ9 266 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 RPS6KB1P23443 525 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 DMTNQ08495 405 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 ADCY9O60503 1353 aa11.62□□□□□ -0.55
SF3B2-206ENST00000528302 POLR3DP05423 398 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-206ENST00000528302 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
SF3B2-206ENST00000528302 FAM177A1Q8N128 213 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-206ENST00000528302 MAP4K1Q92918 833 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 CGNQ9P2M7 1197 aaKnown RBP11.61□□□□□ -0.55
SF3B2-206ENST00000528302 DBF4Q9UBU7 674 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-206ENST00000528302 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 GRM8O00222 908 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 HAND2P61296 217 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-206ENST00000528302 DIP2AQ14689 1571 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 AOX1Q06278 1338 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 KAZALD1Q96I82 304 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
SF3B2-206ENST00000528302 SKILP12757 684 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 PDCP20941 246 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 TFCP2Q12800 502 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 PROSER2Q86WR7 435 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-206ENST00000528302 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 SCAND2PQ9GZW5 306 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-206ENST00000528302 USP31Q70CQ4 1352 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 A0A1B0GVL5 298 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 SMC2O95347 1197 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms