RNA–Protein interactions for RNA: ENST00000527934.1

SORL1-206, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-206ENST00000527934 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
SORL1-206ENST00000527934 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
SORL1-206ENST00000527934 GPTP24298 496 aa13.23□□□□□ -0.29
SORL1-206ENST00000527934 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
SORL1-206ENST00000527934 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
SORL1-206ENST00000527934 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
SORL1-206ENST00000527934 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
SORL1-206ENST00000527934 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
SORL1-206ENST00000527934 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
SORL1-206ENST00000527934 ZNF589Q86UQ0 364 aaPredicted RBP13.22□□□□□ -0.29
SORL1-206ENST00000527934 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
SORL1-206ENST00000527934 CWC22Q9HCG8 908 aaKnown RBP13.22□□□□□ -0.29
SORL1-206ENST00000527934 GOLGA6L22H0YM25 854 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 H7C1W4 665 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 FAM193AP78312 1265 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 TMEM132AQ24JP5 1023 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
SORL1-206ENST00000527934 LARGE1O95461 756 aa13.21□□□□□ -0.29
SORL1-206ENST00000527934 RABL6Q3YEC7 729 aaPredicted RBP13.21□□□□□ -0.29
SORL1-206ENST00000527934 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
SORL1-206ENST00000527934 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
SORL1-206ENST00000527934 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.29
SORL1-206ENST00000527934 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.3
SORL1-206ENST00000527934 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.3
SORL1-206ENST00000527934 RUFY3Q7L099 469 aa13.21□□□□□ -0.3
SORL1-206ENST00000527934 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.3
SORL1-206ENST00000527934 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.3
SORL1-206ENST00000527934 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
SORL1-206ENST00000527934 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
SORL1-206ENST00000527934 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
SORL1-206ENST00000527934 MCM2P49736 904 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 CUL4AQ13619 759 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 HLFQ16534 295 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 CAVIN1Q6NZI2 390 aaKnown RBP13.19□□□□□ -0.3
SORL1-206ENST00000527934 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 ATG9AQ7Z3C6 839 aa13.19□□□□□ -0.3
SORL1-206ENST00000527934 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 TTC14Q96N46 770 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
SORL1-206ENST00000527934 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 GLI3P10071 1580 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
SORL1-206ENST00000527934 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
SORL1-206ENST00000527934 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 GOLIM4O00461 696 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 TBC1D2BQ9UPU7 963 aa13.18□□□□□ -0.3
SORL1-206ENST00000527934 EXOC5O00471 708 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 CCDC191Q8NCU4 936 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 SNRKQ9NRH2 765 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 SLC27A2O14975 620 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 ATP5JP18859 108 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 TCIRG1Q13488 830 aa13.17□□□□□ -0.3
SORL1-206ENST00000527934 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
SORL1-206ENST00000527934 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 ABCC6O95255 1503 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
SORL1-206ENST00000527934 ZKSCAN1P17029 563 aaPredicted RBP13.16□□□□□ -0.3
SORL1-206ENST00000527934 GPT2Q8TD30 523 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
SORL1-206ENST00000527934 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
SORL1-206ENST00000527934 BRD1O95696 1058 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 STARD3NLO95772 234 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
SORL1-206ENST00000527934 COL15A1P39059 1388 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 STK3Q13188 491 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 CCDC57Q2TAC2 916 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 EYA2O00167 538 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 ADORA1P30542 326 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 ISCA1Q9BUE6 129 aa13.15□□□□□ -0.3
SORL1-206ENST00000527934 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
SORL1-206ENST00000527934 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
SORL1-206ENST00000527934 HIP1O00291 1037 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 TAF5LO75529 589 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 ME3Q16798 604 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 LRRC2Q9BYS8 371 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
SORL1-206ENST00000527934 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
SORL1-206ENST00000527934 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms