RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 FKBP5Q13451 457 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-213ENST00000527897 WDR90Q96KV7 1748 aa19.89■□□□□ 0.77
CAPN1-213ENST00000527897 PCCAP05165 728 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-213ENST00000527897 SF3B3Q15393 1217 aaKnown RBP19.88■□□□□ 0.77
CAPN1-213ENST00000527897 CWF19L2Q2TBE0 894 aaKnown RBP19.88■□□□□ 0.77
CAPN1-213ENST00000527897 DPP8Q6V1X1 898 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-213ENST00000527897 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-213ENST00000527897 POTECB2RU33 542 aa19.87■□□□□ 0.77
CAPN1-213ENST00000527897 PPIP5K2O43314 1243 aa19.87■□□□□ 0.77
CAPN1-213ENST00000527897 IGKV5-2P06315 115 aa19.87■□□□□ 0.77
CAPN1-213ENST00000527897 HSP90B1P14625 803 aaKnown RBP19.87■□□□□ 0.77
CAPN1-213ENST00000527897 SP8Q8IXZ3 490 aa19.87■□□□□ 0.77
CAPN1-213ENST00000527897 MPNDQ8N594 471 aa19.87■□□□□ 0.77
CAPN1-213ENST00000527897 CELF1Q92879 486 aaKnown RBP19.87■□□□□ 0.77
CAPN1-213ENST00000527897 CACNA1FO60840 1977 aa19.86■□□□□ 0.77
CAPN1-213ENST00000527897 AOC3Q16853 763 aa19.86■□□□□ 0.77
CAPN1-213ENST00000527897 SMC1BQ8NDV3 1235 aa19.86■□□□□ 0.77
CAPN1-213ENST00000527897 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
CAPN1-213ENST00000527897 COL4A5P29400 1685 aa19.85■□□□□ 0.77
CAPN1-213ENST00000527897 FZD9O00144 591 aa19.85■□□□□ 0.77
CAPN1-213ENST00000527897 EIF6P56537 245 aaKnown RBP19.85■□□□□ 0.77
CAPN1-213ENST00000527897 FSTL1Q12841 308 aa19.85■□□□□ 0.77
CAPN1-213ENST00000527897 NIM1KQ8IY84 436 aa19.85■□□□□ 0.77
CAPN1-213ENST00000527897 SUPT20HQ8NEM7 779 aa19.85■□□□□ 0.77
CAPN1-213ENST00000527897 PDE8AO60658 829 aa19.84■□□□□ 0.77
CAPN1-213ENST00000527897 SEC31BQ9NQW1 1179 aa19.84■□□□□ 0.77
CAPN1-213ENST00000527897 ZNF521Q96K83 1311 aa19.83■□□□□ 0.77
CAPN1-213ENST00000527897 IQCA1LA6NCM1 817 aa19.83■□□□□ 0.77
CAPN1-213ENST00000527897 NEURL1BA8MQ27 555 aa19.83■□□□□ 0.77
CAPN1-213ENST00000527897 CCDC152Q4G0S7 254 aa19.83■□□□□ 0.77
CAPN1-213ENST00000527897 TMC4Q7Z404 712 aa19.83■□□□□ 0.77
CAPN1-213ENST00000527897 DNAAF4Q8WXU2 420 aa19.83■□□□□ 0.77
CAPN1-213ENST00000527897 NSFL1CQ9UNZ2 370 aaKnown RBP19.83■□□□□ 0.77
CAPN1-213ENST00000527897 COL4A1P02462 1669 aa19.83■□□□□ 0.76
CAPN1-213ENST00000527897 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
CAPN1-213ENST00000527897 APLP1P51693 650 aa19.82■□□□□ 0.76
CAPN1-213ENST00000527897 RPS8P62241 208 aaKnown RBP19.82■□□□□ 0.76
CAPN1-213ENST00000527897 UBE3BQ7Z3V4 1068 aa19.82■□□□□ 0.76
CAPN1-213ENST00000527897 SCN4AP35499 1836 aa19.81■□□□□ 0.76
CAPN1-213ENST00000527897 F6X3S4 739 aa19.81■□□□□ 0.76
CAPN1-213ENST00000527897 POTEIP0CG38 1075 aa19.81■□□□□ 0.76
CAPN1-213ENST00000527897 POTEJP0CG39 1038 aa19.81■□□□□ 0.76
CAPN1-213ENST00000527897 EAPPQ56P03 285 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-213ENST00000527897 GPC2Q8N158 579 aa19.81■□□□□ 0.76
CAPN1-213ENST00000527897 L3MBTL3Q96JM7 780 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-213ENST00000527897 RTFDC1Q9BY42 306 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-213ENST00000527897 CDHR2Q9BYE9 1310 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 LRRC37AA6NMS7 1700 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 CTSWP56202 376 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 HTRA3P83110 453 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 TAF1DQ9H5J8 278 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-213ENST00000527897 HACL1Q9UJ83 578 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 MYH3P11055 1940 aa19.8■□□□□ 0.76
CAPN1-213ENST00000527897 E9PSI1 815 aa19.79■□□□□ 0.76
CAPN1-213ENST00000527897 GPSM2P81274 684 aa19.79■□□□□ 0.76
CAPN1-213ENST00000527897 GCKRQ14397 625 aa19.79■□□□□ 0.76
CAPN1-213ENST00000527897 RIMBP2O15034 1052 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 EPHX2P34913 555 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 ANKRD18AQ8IVF6 992 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 LINS1Q8NG48 757 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 VPS33BQ9H267 617 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 ZNRF3Q9ULT6 936 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 CLEC11AQ9Y240 323 aa19.78■□□□□ 0.76
CAPN1-213ENST00000527897 SPEF2Q9C093 1822 aa19.77■□□□□ 0.76
CAPN1-213ENST00000527897 LMOD1P29536 600 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-213ENST00000527897 CHADLQ6NUI6 762 aa19.77■□□□□ 0.76
CAPN1-213ENST00000527897 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.76
CAPN1-213ENST00000527897 GPR101Q96P66 508 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-213ENST00000527897 ANKIB1Q9P2G1 1089 aa19.77■□□□□ 0.76
CAPN1-213ENST00000527897 DUOX1Q9NRD9 1551 aa19.77■□□□□ 0.76
CAPN1-213ENST00000527897 H7C1W4 665 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 RAD17O75943 681 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 WASHC4Q2M389 1173 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 DIEXFQ68CQ4 756 aaKnown RBP19.76■□□□□ 0.75
CAPN1-213ENST00000527897 TTLL11Q8NHH1 800 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 CDCA7LQ96GN5 454 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 GREM2Q9H772 168 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 POLLQ9UGP5 575 aa19.76■□□□□ 0.75
CAPN1-213ENST00000527897 CXCL9Q07325 125 aa19.75■□□□□ 0.75
CAPN1-213ENST00000527897 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
CAPN1-213ENST00000527897 LDHDQ86WU2 507 aa19.75■□□□□ 0.75
CAPN1-213ENST00000527897 CDC5LQ99459 802 aaKnown RBP19.75■□□□□ 0.75
CAPN1-213ENST00000527897 UFL1O94874 794 aa19.74■□□□□ 0.75
CAPN1-213ENST00000527897 CIAPIN1Q6FI81 312 aa19.74■□□□□ 0.75
CAPN1-213ENST00000527897 EYA3Q99504 573 aa19.74■□□□□ 0.75
CAPN1-213ENST00000527897 DBNDD1Q9H9R9 158 aa19.74■□□□□ 0.75
CAPN1-213ENST00000527897 G3V3G9 751 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 EPS15P42566 896 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 SCNN1DP51172 638 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 DOK7Q18PE1 504 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 BEND3Q5T5X7 828 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 DCAF8Q5TAQ9 597 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 TBC1D16Q8TBP0 767 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 BCL2L13Q9BXK5 485 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 GGA1Q9UJY5 639 aa19.73■□□□□ 0.75
CAPN1-213ENST00000527897 LTBP1Q14766 1721 aa19.72■□□□□ 0.75
CAPN1-213ENST00000527897 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-213ENST00000527897 MIER1Q8N108 512 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms