RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 NOGQ13253 232 aa16.28■□□□□ 0.2
SRPRA-202ENST00000527817 DGKZQ13574 1117 aa16.28■□□□□ 0.2
SRPRA-202ENST00000527817 DPP8Q6V1X1 898 aaPredicted RBP16.28■□□□□ 0.2
SRPRA-202ENST00000527817 BCL2L13Q9BXK5 485 aa16.28■□□□□ 0.2
SRPRA-202ENST00000527817 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
SRPRA-202ENST00000527817 ABCC4O15439 1325 aa16.27■□□□□ 0.2
SRPRA-202ENST00000527817 PDE4DIPQ5VU43 2346 aa16.27■□□□□ 0.2
SRPRA-202ENST00000527817 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
SRPRA-202ENST00000527817 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-202ENST00000527817 H7C1D1 291 aa16.26■□□□□ 0.19
SRPRA-202ENST00000527817 RAD17O75943 681 aa16.26■□□□□ 0.19
SRPRA-202ENST00000527817 PDIA6Q15084 440 aa16.26■□□□□ 0.19
SRPRA-202ENST00000527817 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
SRPRA-202ENST00000527817 TRPM4Q8TD43 1214 aa16.26■□□□□ 0.19
SRPRA-202ENST00000527817 DPF2Q92785 391 aa16.26■□□□□ 0.19
SRPRA-202ENST00000527817 USP48Q86UV5 1035 aa16.25■□□□□ 0.19
SRPRA-202ENST00000527817 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
SRPRA-202ENST00000527817 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
SRPRA-202ENST00000527817 ZNF408Q9H9D4 720 aa16.25■□□□□ 0.19
SRPRA-202ENST00000527817 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
SRPRA-202ENST00000527817 HUNKP57058 714 aa16.24■□□□□ 0.19
SRPRA-202ENST00000527817 NFE2L2Q16236 605 aa16.24■□□□□ 0.19
SRPRA-202ENST00000527817 DDX46Q7L014 1031 aaKnown RBP16.24■□□□□ 0.19
SRPRA-202ENST00000527817 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
SRPRA-202ENST00000527817 GRAPQ13588 217 aa16.23■□□□□ 0.19
SRPRA-202ENST00000527817 TMC4Q7Z404 712 aa16.23■□□□□ 0.19
SRPRA-202ENST00000527817 GRAPLQ8TC17 118 aaPredicted RBP16.23■□□□□ 0.19
SRPRA-202ENST00000527817 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
SRPRA-202ENST00000527817 FAM155AB1AL88 458 aaPredicted RBP16.22■□□□□ 0.19
SRPRA-202ENST00000527817 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
SRPRA-202ENST00000527817 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
SRPRA-202ENST00000527817 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
SRPRA-202ENST00000527817 NLRP10Q86W26 655 aa16.22■□□□□ 0.19
SRPRA-202ENST00000527817 MICALL2Q8IY33 904 aa16.22■□□□□ 0.19
SRPRA-202ENST00000527817 CCDC102AQ96A19 550 aa16.22■□□□□ 0.19
SRPRA-202ENST00000527817 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
SRPRA-202ENST00000527817 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.19
SRPRA-202ENST00000527817 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
SRPRA-202ENST00000527817 EIF2S2P20042 333 aaKnown RBP16.21■□□□□ 0.19
SRPRA-202ENST00000527817 C2orf69Q8N8R5 385 aa16.21■□□□□ 0.19
SRPRA-202ENST00000527817 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
SRPRA-202ENST00000527817 GBA2Q9HCG7 927 aaPredicted RBP16.21■□□□□ 0.19
SRPRA-202ENST00000527817 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
SRPRA-202ENST00000527817 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
SRPRA-202ENST00000527817 DLK2Q6UY11 383 aa16.2■□□□□ 0.18
SRPRA-202ENST00000527817 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
SRPRA-202ENST00000527817 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
SRPRA-202ENST00000527817 TSPYL4Q9UJ04 414 aa16.2■□□□□ 0.18
SRPRA-202ENST00000527817 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
SRPRA-202ENST00000527817 POLR2AP24928 1970 aaKnown RBP16.2■□□□□ 0.18
SRPRA-202ENST00000527817 ANKRD36CQ5JPF3 1778 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 PSMD14O00487 310 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 RPS12P25398 132 aaKnown RBP16.19■□□□□ 0.18
SRPRA-202ENST00000527817 KIF23Q02241 960 aaPredicted RBP16.19■□□□□ 0.18
SRPRA-202ENST00000527817 WASHC4Q2M389 1173 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 PROSER3Q2NL68 480 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 KRT26Q7Z3Y9 468 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
SRPRA-202ENST00000527817 ANXA1P04083 346 aa16.18■□□□□ 0.18
SRPRA-202ENST00000527817 DCPSQ96C86 337 aaKnown RBP16.18■□□□□ 0.18
SRPRA-202ENST00000527817 RNF186Q9NXI6 227 aa16.18■□□□□ 0.18
SRPRA-202ENST00000527817 ZNF157P51786 506 aaPredicted RBP16.17■□□□□ 0.18
SRPRA-202ENST00000527817 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
SRPRA-202ENST00000527817 XAGE3Q8WTP9 111 aa16.17■□□□□ 0.18
SRPRA-202ENST00000527817 TRPA1O75762 1119 aa16.16■□□□□ 0.18
SRPRA-202ENST00000527817 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
SRPRA-202ENST00000527817 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
SRPRA-202ENST00000527817 CSRNP1Q96S65 589 aa16.16■□□□□ 0.18
SRPRA-202ENST00000527817 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
SRPRA-202ENST00000527817 EGFRP00533 1210 aa16.15■□□□□ 0.18
SRPRA-202ENST00000527817 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
SRPRA-202ENST00000527817 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
SRPRA-202ENST00000527817 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
SRPRA-202ENST00000527817 POLLQ9UGP5 575 aa16.15■□□□□ 0.18
SRPRA-202ENST00000527817 LAMB2P55268 1798 aa16.15■□□□□ 0.18
SRPRA-202ENST00000527817 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
SRPRA-202ENST00000527817 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
SRPRA-202ENST00000527817 RIMBP2O15034 1052 aa16.14■□□□□ 0.17
SRPRA-202ENST00000527817 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
SRPRA-202ENST00000527817 EYA3Q99504 573 aa16.14■□□□□ 0.17
SRPRA-202ENST00000527817 TAF1P21675 1872 aa16.14■□□□□ 0.17
SRPRA-202ENST00000527817 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
SRPRA-202ENST00000527817 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
SRPRA-202ENST00000527817 SLC10A3P09131 477 aa16.13■□□□□ 0.17
SRPRA-202ENST00000527817 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
SRPRA-202ENST00000527817 RIPK4P57078 832 aa16.13■□□□□ 0.17
SRPRA-202ENST00000527817 GPSM2P81274 684 aa16.13■□□□□ 0.17
SRPRA-202ENST00000527817 CELF1Q92879 486 aaKnown RBP16.13■□□□□ 0.17
SRPRA-202ENST00000527817 AKAP11Q9UKA4 1901 aa16.13■□□□□ 0.17
SRPRA-202ENST00000527817 ECE2O60344 883 aa16.12■□□□□ 0.17
SRPRA-202ENST00000527817 SOX10P56693 466 aa16.12■□□□□ 0.17
SRPRA-202ENST00000527817 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
SRPRA-202ENST00000527817 CTU1Q7Z7A3 348 aaKnown RBP16.12■□□□□ 0.17
SRPRA-202ENST00000527817 SULF1Q8IWU6 871 aa16.12■□□□□ 0.17
SRPRA-202ENST00000527817 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
SRPRA-202ENST00000527817 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
SRPRA-202ENST00000527817 RPS8P62241 208 aaKnown RBP16.11■□□□□ 0.17
SRPRA-202ENST00000527817 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
SRPRA-202ENST00000527817 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms