RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 MYH3P11055 1940 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 MS4A1P11836 297 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 SYNE4Q8N205 404 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 CRAMP1Q96RY5 1269 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 RNF181Q9P0P0 153 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 HDAC5Q9UQL6 1122 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 WDR90Q96KV7 1748 aa29.33■■■□□ 2.29
LRRK1-206ENST00000527698 GRM8O00222 908 aa29.32■■■□□ 2.28
LRRK1-206ENST00000527698 UBE3BQ7Z3V4 1068 aa29.32■■■□□ 2.28
LRRK1-206ENST00000527698 RTL5Q5HYW3 569 aaPredicted RBP29.31■■■□□ 2.28
LRRK1-206ENST00000527698 SOGA3Q5TF21 947 aa29.31■■■□□ 2.28
LRRK1-206ENST00000527698 PLA2G12BQ9BX93 195 aa29.31■■■□□ 2.28
LRRK1-206ENST00000527698 ZC3H4Q9UPT8 1303 aaKnown RBP29.3■■■□□ 2.28
LRRK1-206ENST00000527698 DDX46Q7L014 1031 aaKnown RBP29.3■■■□□ 2.28
LRRK1-206ENST00000527698 C16orf71Q8IYS4 520 aaPredicted RBP29.3■■■□□ 2.28
LRRK1-206ENST00000527698 DNAJC5GQ8N7S2 189 aa29.3■■■□□ 2.28
LRRK1-206ENST00000527698 ABCC4O15439 1325 aa29.29■■■□□ 2.28
LRRK1-206ENST00000527698 TRIM27P14373 513 aa29.29■■■□□ 2.28
LRRK1-206ENST00000527698 CCDC152Q4G0S7 254 aa29.29■■■□□ 2.28
LRRK1-206ENST00000527698 INTS3Q68E01 1043 aaKnown RBP29.29■■■□□ 2.28
LRRK1-206ENST00000527698 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.29■■■□□ 2.28
LRRK1-206ENST00000527698 UTYO14607 1347 aa29.28■■■□□ 2.28
LRRK1-206ENST00000527698 FSTL1Q12841 308 aa29.28■■■□□ 2.28
LRRK1-206ENST00000527698 GRIPAP1Q4V328 841 aa29.28■■■□□ 2.28
LRRK1-206ENST00000527698 CASP7P55210 303 aa29.27■■■□□ 2.28
LRRK1-206ENST00000527698 TMC4Q7Z404 712 aa29.27■■■□□ 2.28
LRRK1-206ENST00000527698 BBOX1O75936 387 aa29.26■■■□□ 2.27
LRRK1-206ENST00000527698 PRPF40BQ6NWY9 871 aaKnown RBP29.26■■■□□ 2.27
LRRK1-206ENST00000527698 FTSJ3Q8IY81 847 aaKnown RBP29.26■■■□□ 2.27
LRRK1-206ENST00000527698 TMX4Q9H1E5 349 aaPredicted RBP29.26■■■□□ 2.27
LRRK1-206ENST00000527698 CTSWP56202 376 aa29.25■■■□□ 2.27
LRRK1-206ENST00000527698 CC2D2BQ6DHV5 1058 aa29.25■■■□□ 2.27
LRRK1-206ENST00000527698 CACNA1SQ13698 1873 aa29.25■■■□□ 2.27
LRRK1-206ENST00000527698 C3orf67Q6ZVT6 689 aa29.24■■■□□ 2.27
LRRK1-206ENST00000527698 SLX4Q8IY92 1834 aa29.24■■■□□ 2.27
LRRK1-206ENST00000527698 DZIP1LQ8IYY4 767 aaKnown RBP29.23■■■□□ 2.27
LRRK1-206ENST00000527698 JARID2Q92833 1246 aaPredicted RBP29.23■■■□□ 2.27
LRRK1-206ENST00000527698 USP44Q9H0E7 712 aa29.23■■■□□ 2.27
LRRK1-206ENST00000527698 RTL9Q8NET4 1388 aa29.23■■■□□ 2.27
LRRK1-206ENST00000527698 TTLL11Q8NHH1 800 aa29.22■■■□□ 2.27
LRRK1-206ENST00000527698 RRAGCQ9HB90 399 aa29.22■■■□□ 2.27
LRRK1-206ENST00000527698 CCDC88AQ3V6T2 1871 aa29.22■■■□□ 2.27
LRRK1-206ENST00000527698 LMNB1P20700 586 aa29.21■■■□□ 2.27
LRRK1-206ENST00000527698 GRAPQ13588 217 aa29.21■■■□□ 2.27
LRRK1-206ENST00000527698 GRAPLQ8TC17 118 aaPredicted RBP29.21■■■□□ 2.27
LRRK1-206ENST00000527698 TIAM2Q8IVF5 1701 aa29.2■■■□□ 2.27
LRRK1-206ENST00000527698 CSF1RP07333 972 aa29.2■■■□□ 2.26
LRRK1-206ENST00000527698 GNAI3P08754 354 aa29.2■■■□□ 2.26
LRRK1-206ENST00000527698 RASSF7Q02833 373 aa29.2■■■□□ 2.26
LRRK1-206ENST00000527698 NBPF7P0C2Y1 421 aaPredicted RBP29.19■■■□□ 2.26
LRRK1-206ENST00000527698 RTKN2Q8IZC4 609 aa29.19■■■□□ 2.26
LRRK1-206ENST00000527698 CLUAP1Q96AJ1 413 aa29.19■■■□□ 2.26
LRRK1-206ENST00000527698 CDC5LQ99459 802 aaKnown RBP29.19■■■□□ 2.26
LRRK1-206ENST00000527698 C7orf43Q8WVR3 580 aa29.18■■■□□ 2.26
LRRK1-206ENST00000527698 PPEF1O14829 653 aaPredicted RBP29.17■■■□□ 2.26
LRRK1-206ENST00000527698 C21orf2O43822 256 aa29.17■■■□□ 2.26
LRRK1-206ENST00000527698 UBTFL1P0CB47 393 aaPredicted RBP29.17■■■□□ 2.26
LRRK1-206ENST00000527698 RPS8P62241 208 aaKnown RBP29.17■■■□□ 2.26
LRRK1-206ENST00000527698 CCDC93Q567U6 631 aa29.17■■■□□ 2.26
LRRK1-206ENST00000527698 FOXO4P98177 505 aa29.16■■■□□ 2.26
LRRK1-206ENST00000527698 SP8Q8IXZ3 490 aa29.16■■■□□ 2.26
LRRK1-206ENST00000527698 SMC1BQ8NDV3 1235 aa29.16■■■□□ 2.26
LRRK1-206ENST00000527698 ATP6V0A2Q9Y487 856 aa29.16■■■□□ 2.26
LRRK1-206ENST00000527698 GLTPD2A6NH11 291 aa29.15■■■□□ 2.26
LRRK1-206ENST00000527698 PDE3AQ14432 1141 aa29.15■■■□□ 2.26
LRRK1-206ENST00000527698 KLRG1Q96E93 195 aa29.15■■■□□ 2.26
LRRK1-206ENST00000527698 CHMP4BQ9H444 224 aaKnown RBP29.15■■■□□ 2.26
LRRK1-206ENST00000527698 DICER1Q9UPY3 1922 aaKnown RBP29.14■■■□□ 2.26
LRRK1-206ENST00000527698 PRELPP51888 382 aa29.14■■■□□ 2.26
LRRK1-206ENST00000527698 ANKRD18AQ8IVF6 992 aa29.14■■■□□ 2.26
LRRK1-206ENST00000527698 FER1L6Q2WGJ9 1857 aa29.14■■■□□ 2.26
LRRK1-206ENST00000527698 IFIT5Q13325 482 aaKnown RBP29.13■■■□□ 2.25
LRRK1-206ENST00000527698 TMEM57Q8N5G2 664 aa29.13■■■□□ 2.25
LRRK1-206ENST00000527698 TAF1P21675 1872 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 ANKRD18BA2A2Z9 1011 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 NFKBIEO00221 500 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 CCDC57Q2TAC2 916 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 RABL6Q3YEC7 729 aaPredicted RBP29.12■■■□□ 2.25
LRRK1-206ENST00000527698 LMBR1LQ6UX01 489 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 JMYQ8N9B5 988 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 SUCLG2Q96I99 432 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 GREM2Q9H772 168 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 LTBP3Q9NS15 1303 aa29.12■■■□□ 2.25
LRRK1-206ENST00000527698 VEGFAP15692 232 aaPredicted RBP29.11■■■□□ 2.25
LRRK1-206ENST00000527698 ITGA6P23229 1130 aa29.11■■■□□ 2.25
LRRK1-206ENST00000527698 IGHMBP2P38935 993 aaKnown RBP29.1■■■□□ 2.25
LRRK1-206ENST00000527698 ITPRIPQ8IWB1 547 aa29.1■■■□□ 2.25
LRRK1-206ENST00000527698 CELF1Q92879 486 aaKnown RBP29.1■■■□□ 2.25
LRRK1-206ENST00000527698 SEC31BQ9NQW1 1179 aa29.1■■■□□ 2.25
LRRK1-206ENST00000527698 ZNF219Q9P2Y4 722 aaPredicted RBP29.1■■■□□ 2.25
LRRK1-206ENST00000527698 KAZALD1Q96I82 304 aa29.09■■■□□ 2.25
LRRK1-206ENST00000527698 CCDC85AQ96PX6 553 aaPredicted RBP29.09■■■□□ 2.25
LRRK1-206ENST00000527698 PSMD1Q99460 953 aa29.09■■■□□ 2.25
LRRK1-206ENST00000527698 BICC1Q9H694 974 aaKnown RBP29.09■■■□□ 2.25
LRRK1-206ENST00000527698 BSDC1Q9NW68 430 aaPredicted RBP29.09■■■□□ 2.25
LRRK1-206ENST00000527698 CHMP3Q9Y3E7 222 aa29.09■■■□□ 2.25
LRRK1-206ENST00000527698 HTRA3P83110 453 aa29.08■■■□□ 2.25
LRRK1-206ENST00000527698 MPHOSPH8Q99549 860 aa29.08■■■□□ 2.25
LRRK1-206ENST00000527698 MEIS3Q99687 375 aa29.08■■■□□ 2.25
LRRK1-206ENST00000527698 TAOK3Q9H2K8 898 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms