RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
CDC27-204ENST00000527547 GSPT1P15170 499 aaKnown RBP11.33□□□□□ -0.6
CDC27-204ENST00000527547 ADRA2BP18089 450 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 ITGA6P23229 1130 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 CCDC57Q2TAC2 916 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
CDC27-204ENST00000527547 ABCC12Q96J65 1359 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.6
CDC27-204ENST00000527547 TFCP2Q12800 502 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
CDC27-204ENST00000527547 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 DDX60Q8IY21 1712 aaKnown RBP11.33□□□□□ -0.6
CDC27-204ENST00000527547 SALL3Q9BXA9 1300 aa11.33□□□□□ -0.6
CDC27-204ENST00000527547 PDE1AP54750 535 aa11.32□□□□□ -0.6
CDC27-204ENST00000527547 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
CDC27-204ENST00000527547 ATG9AQ7Z3C6 839 aa11.32□□□□□ -0.6
CDC27-204ENST00000527547 CCDC8Q9H0W5 538 aaPredicted RBP11.32□□□□□ -0.6
CDC27-204ENST00000527547 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
CDC27-204ENST00000527547 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
CDC27-204ENST00000527547 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
CDC27-204ENST00000527547 MX1P20591 662 aa11.32□□□□□ -0.6
CDC27-204ENST00000527547 EAF2Q96CJ1 260 aaPredicted RBP11.32□□□□□ -0.6
CDC27-204ENST00000527547 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 AACSQ86V21 672 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 MYH3P11055 1940 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
CDC27-204ENST00000527547 TTC22Q5TAA0 569 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
CDC27-204ENST00000527547 COL4A1P02462 1669 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 PNPLA7Q6ZV29 1317 aa11.31□□□□□ -0.6
CDC27-204ENST00000527547 EYA2O00167 538 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 NPHP1O15259 732 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 RGL2O15211 777 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
CDC27-204ENST00000527547 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
CDC27-204ENST00000527547 BAG6P46379 1132 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 DDR1Q08345 913 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
CDC27-204ENST00000527547 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
CDC27-204ENST00000527547 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 IFIT2P09913 472 aaKnown RBP11.29□□□□□ -0.6
CDC27-204ENST00000527547 TM4SF1P30408 202 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 LDHAL6AQ6ZMR3 332 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
CDC27-204ENST00000527547 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
CDC27-204ENST00000527547 SDSP20132 328 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 TIMM10P62072 90 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 OSBPL3Q9H4L5 887 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 TAF1P21675 1872 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 SERPINB2P05120 415 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
CDC27-204ENST00000527547 CCDC152Q4G0S7 254 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 CNBD1Q8NA66 436 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
CDC27-204ENST00000527547 CNNM1Q9NRU3 951 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 LAMB2P55268 1798 aa11.28□□□□□ -0.6
CDC27-204ENST00000527547 CASZ1Q86V15 1759 aa11.27□□□□□ -0.6
CDC27-204ENST00000527547 SLC10A5Q5PT55 438 aa11.27□□□□□ -0.6
CDC27-204ENST00000527547 PI4K2BQ8TCG2 481 aa11.27□□□□□ -0.6
CDC27-204ENST00000527547 NEUROD6Q96NK8 337 aa11.27□□□□□ -0.6
CDC27-204ENST00000527547 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.6
CDC27-204ENST00000527547 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.6
CDC27-204ENST00000527547 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.6
CDC27-204ENST00000527547 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.6
CDC27-204ENST00000527547 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
CDC27-204ENST00000527547 CIAO1O76071 339 aa11.27□□□□□ -0.61
CDC27-204ENST00000527547 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
CDC27-204ENST00000527547 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.61
CDC27-204ENST00000527547 SNAP23O00161 211 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 NLRP3Q96P20 1036 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 SF3B3Q15393 1217 aaKnown RBP11.26□□□□□ -0.61
CDC27-204ENST00000527547 METTL24Q5JXM2 366 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
CDC27-204ENST00000527547 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
CDC27-204ENST00000527547 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
CDC27-204ENST00000527547 TAF5LO75529 589 aa11.25□□□□□ -0.61
CDC27-204ENST00000527547 HSP90B1P14625 803 aaKnown RBP11.25□□□□□ -0.61
CDC27-204ENST00000527547 MPHOSPH8Q99549 860 aa11.25□□□□□ -0.61
CDC27-204ENST00000527547 ECHDC1Q9NTX5 307 aa11.25□□□□□ -0.61
CDC27-204ENST00000527547 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
CDC27-204ENST00000527547 MMP10P09238 476 aa11.25□□□□□ -0.61
CDC27-204ENST00000527547 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms