RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
LTBP3-208ENST00000527339 L3MBTL3Q96JM7 780 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-208ENST00000527339 TAF1DQ9H5J8 278 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-208ENST00000527339 ZNF277Q9NRM2 450 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-208ENST00000527339 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-208ENST00000527339 IGKV5-2P06315 115 aa22.1■■□□□ 1.13
LTBP3-208ENST00000527339 SYNE4Q8N205 404 aa22.1■■□□□ 1.13
LTBP3-208ENST00000527339 MRPL50Q8N5N7 158 aaKnown RBP22.1■■□□□ 1.13
LTBP3-208ENST00000527339 ZBTB38Q8NAP3 1195 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-208ENST00000527339 FAM89AQ96GI7 184 aa22.1■■□□□ 1.13
LTBP3-208ENST00000527339 HCLS1P14317 486 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-208ENST00000527339 ALDH1B1P30837 517 aa22.09■■□□□ 1.13
LTBP3-208ENST00000527339 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
LTBP3-208ENST00000527339 SSH1Q8WYL5 1049 aa22.09■■□□□ 1.13
LTBP3-208ENST00000527339 RPGRQ92834 1020 aaKnown RBP22.09■■□□□ 1.13
LTBP3-208ENST00000527339 ITGBL1O95965 494 aaPredicted RBP22.08■■□□□ 1.13
LTBP3-208ENST00000527339 PCCAP05165 728 aaPredicted RBP22.08■■□□□ 1.13
LTBP3-208ENST00000527339 HOXA10P31260 410 aaPredicted RBP22.08■■□□□ 1.13
LTBP3-208ENST00000527339 CCDC93Q567U6 631 aa22.08■■□□□ 1.13
LTBP3-208ENST00000527339 SOGA3Q5TF21 947 aa22.08■■□□□ 1.13
LTBP3-208ENST00000527339 C3orf67Q6ZVT6 689 aa22.08■■□□□ 1.13
LTBP3-208ENST00000527339 NEURL1BA8MQ27 555 aa22.07■■□□□ 1.12
LTBP3-208ENST00000527339 HSP90B1P14625 803 aaKnown RBP22.07■■□□□ 1.12
LTBP3-208ENST00000527339 FKBP4Q02790 459 aaKnown RBP eCLIP22.07■■□□□ 1.12
LTBP3-208ENST00000527339 SCN4AP35499 1836 aa22.07■■□□□ 1.12
LTBP3-208ENST00000527339 MYH3P11055 1940 aa22.07■■□□□ 1.12
LTBP3-208ENST00000527339 CNTNAP1P78357 1384 aa22.07■■□□□ 1.12
LTBP3-208ENST00000527339 PTPRCP08575 1304 aa22.06■■□□□ 1.12
LTBP3-208ENST00000527339 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
LTBP3-208ENST00000527339 FOXN1O15353 648 aa22.06■■□□□ 1.12
LTBP3-208ENST00000527339 CWF19L2Q2TBE0 894 aaKnown RBP22.06■■□□□ 1.12
LTBP3-208ENST00000527339 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
LTBP3-208ENST00000527339 LDHDQ86WU2 507 aa22.06■■□□□ 1.12
LTBP3-208ENST00000527339 LINS1Q8NG48 757 aa22.06■■□□□ 1.12
LTBP3-208ENST00000527339 RBM17Q96I25 401 aaKnown RBP22.06■■□□□ 1.12
LTBP3-208ENST00000527339 SMC4Q9NTJ3 1288 aa22.06■■□□□ 1.12
LTBP3-208ENST00000527339 ADAMTSL1Q8N6G6 1762 aa22.05■■□□□ 1.12
LTBP3-208ENST00000527339 COL4A5P29400 1685 aa22.05■■□□□ 1.12
LTBP3-208ENST00000527339 F6X3S4 739 aa22.05■■□□□ 1.12
LTBP3-208ENST00000527339 IRS4O14654 1257 aaPredicted RBP22.05■■□□□ 1.12
LTBP3-208ENST00000527339 CRAMP1Q96RY5 1269 aa22.05■■□□□ 1.12
LTBP3-208ENST00000527339 BCL2L13Q9BXK5 485 aa22.05■■□□□ 1.12
LTBP3-208ENST00000527339 IQCA1LA6NCM1 817 aa22.04■■□□□ 1.12
LTBP3-208ENST00000527339 CDHR2Q9BYE9 1310 aa22.04■■□□□ 1.12
LTBP3-208ENST00000527339 TAF1P21675 1872 aa22.03■■□□□ 1.12
LTBP3-208ENST00000527339 VEGFBP49765 207 aa22.03■■□□□ 1.12
LTBP3-208ENST00000527339 GCKRQ14397 625 aa22.03■■□□□ 1.12
LTBP3-208ENST00000527339 SF3B3Q15393 1217 aaKnown RBP22.03■■□□□ 1.12
LTBP3-208ENST00000527339 FZD9O00144 591 aa22.02■■□□□ 1.12
LTBP3-208ENST00000527339 RARSP54136 660 aaKnown RBP22.02■■□□□ 1.12
LTBP3-208ENST00000527339 BRPF1P55201 1214 aaPredicted RBP22.02■■□□□ 1.12
LTBP3-208ENST00000527339 EAPPQ56P03 285 aaPredicted RBP22.02■■□□□ 1.12
LTBP3-208ENST00000527339 BEND3Q5T5X7 828 aa22.02■■□□□ 1.12
LTBP3-208ENST00000527339 PDE8AO60658 829 aa22.01■■□□□ 1.11
LTBP3-208ENST00000527339 DDX46Q7L014 1031 aaKnown RBP22.01■■□□□ 1.11
LTBP3-208ENST00000527339 ABCC4O15439 1325 aa22.01■■□□□ 1.11
LTBP3-208ENST00000527339 H7C1W4 665 aa22■■□□□ 1.11
LTBP3-208ENST00000527339 EPHX2P34913 555 aa22■■□□□ 1.11
LTBP3-208ENST00000527339 IARSP41252 1262 aaKnown RBP22■■□□□ 1.11
LTBP3-208ENST00000527339 MAP1SQ66K74 1059 aaPredicted RBP22■■□□□ 1.11
LTBP3-208ENST00000527339 SLC4A10Q6U841 1118 aa22■■□□□ 1.11
LTBP3-208ENST00000527339 JARID2Q92833 1246 aaPredicted RBP22■■□□□ 1.11
LTBP3-208ENST00000527339 HACL1Q9UJ83 578 aa22■■□□□ 1.11
LTBP3-208ENST00000527339 TMEM88BA6NKF7 163 aa21.99■■□□□ 1.11
LTBP3-208ENST00000527339 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
LTBP3-208ENST00000527339 RTKN2Q8IZC4 609 aa21.99■■□□□ 1.11
LTBP3-208ENST00000527339 LTBP1Q14766 1721 aa21.98■■□□□ 1.11
LTBP3-208ENST00000527339 PPEF1O14829 653 aaPredicted RBP21.98■■□□□ 1.11
LTBP3-208ENST00000527339 CC2D2BQ6DHV5 1058 aa21.98■■□□□ 1.11
LTBP3-208ENST00000527339 UBE3BQ7Z3V4 1068 aa21.98■■□□□ 1.11
LTBP3-208ENST00000527339 SRCIN1Q9C0H9 1055 aa21.98■■□□□ 1.11
LTBP3-208ENST00000527339 BBOX1O75936 387 aa21.97■■□□□ 1.11
LTBP3-208ENST00000527339 FMR1Q06787 632 aaKnown RBP eCLIP21.97■■□□□ 1.11
LTBP3-208ENST00000527339 GRAPQ13588 217 aa21.97■■□□□ 1.11
LTBP3-208ENST00000527339 GRAPLQ8TC17 118 aaPredicted RBP21.97■■□□□ 1.11
LTBP3-208ENST00000527339 CLEC11AQ9Y240 323 aa21.97■■□□□ 1.11
LTBP3-208ENST00000527339 KIF16BQ96L93 1317 aa21.97■■□□□ 1.11
LTBP3-208ENST00000527339 CASP7P55210 303 aa21.96■■□□□ 1.11
LTBP3-208ENST00000527339 CCDC152Q4G0S7 254 aa21.96■■□□□ 1.11
LTBP3-208ENST00000527339 GRIPAP1Q4V328 841 aa21.96■■□□□ 1.11
LTBP3-208ENST00000527339 CNTROBQ8N137 903 aa21.96■■□□□ 1.11
LTBP3-208ENST00000527339 LRRC37AA6NMS7 1700 aa21.95■■□□□ 1.1
LTBP3-208ENST00000527339 CTSWP56202 376 aa21.95■■□□□ 1.1
LTBP3-208ENST00000527339 TMC4Q7Z404 712 aa21.95■■□□□ 1.1
LTBP3-208ENST00000527339 PSMD1Q99460 953 aa21.95■■□□□ 1.1
LTBP3-208ENST00000527339 PLA2G12BQ9BX93 195 aa21.95■■□□□ 1.1
LTBP3-208ENST00000527339 WBP1LQ9NX94 342 aa21.95■■□□□ 1.1
LTBP3-208ENST00000527339 NOB1Q9ULX3 412 aaKnown RBP21.95■■□□□ 1.1
LTBP3-208ENST00000527339 GRM8O00222 908 aa21.94■■□□□ 1.1
LTBP3-208ENST00000527339 GPC2Q8N158 579 aa21.94■■□□□ 1.1
LTBP3-208ENST00000527339 API5Q9BZZ5 524 aaKnown RBP21.94■■□□□ 1.1
LTBP3-208ENST00000527339 TMX4Q9H1E5 349 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-208ENST00000527339 ATP6V0A2Q9Y487 856 aa21.94■■□□□ 1.1
LTBP3-208ENST00000527339 ARHGAP45Q92619 1136 aa21.93■■□□□ 1.1
LTBP3-208ENST00000527339 PRDM10Q9NQV6 1147 aa21.93■■□□□ 1.1
LTBP3-208ENST00000527339 C9orf78Q9NZ63 289 aaPredicted RBP21.93■■□□□ 1.1
LTBP3-208ENST00000527339 COL4A1P02462 1669 aa21.92■■□□□ 1.1
LTBP3-208ENST00000527339 RASSF10A6NK89 507 aa21.92■■□□□ 1.1
LTBP3-208ENST00000527339 SP8Q8IXZ3 490 aa21.92■■□□□ 1.1
LTBP3-208ENST00000527339 TTLL11Q8NHH1 800 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms