RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 SCHIP1Q9P0W5 487 aaPredicted RBP5.91□□□□□ -1.46
CLNS1A-208ENST00000527265 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
CLNS1A-208ENST00000527265 LMOD1P29536 600 aaPredicted RBP5.9□□□□□ -1.46
CLNS1A-208ENST00000527265 INTS5Q6P9B9 1019 aaKnown RBP5.9□□□□□ -1.46
CLNS1A-208ENST00000527265 WFDC8Q8IUA0 241 aa5.9□□□□□ -1.46
CLNS1A-208ENST00000527265 TFIP11Q9UBB9 837 aaKnown RBP5.9□□□□□ -1.46
CLNS1A-208ENST00000527265 SERTM1A2A2V5 107 aa5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 SFI1A8K8P3 1242 aa5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 PIK3CDO00329 1044 aa5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 SRPK2P78362 688 aaKnown RBP5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 DZIP1LQ8IYY4 767 aaKnown RBP5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 FAM177A1Q8N128 213 aaPredicted RBP5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 PLPP7Q8NBV4 271 aa5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 ZDHHC1Q8WTX9 485 aa5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 DNAJB12Q9NXW2 375 aaKnown RBP5.89□□□□□ -1.47
CLNS1A-208ENST00000527265 ATP9BO43861 1147 aa5.88□□□□□ -1.47
CLNS1A-208ENST00000527265 TGFB1P01137 390 aa5.88□□□□□ -1.47
CLNS1A-208ENST00000527265 IGLV1-40P01703 118 aa5.88□□□□□ -1.47
CLNS1A-208ENST00000527265 MAFBQ9Y5Q3 323 aaPredicted RBP5.88□□□□□ -1.47
CLNS1A-208ENST00000527265 WNT11O96014 354 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 PSME1Q06323 249 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 TYRO3Q06418 890 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 FAM35AQ86V20 835 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 SLC9A9Q8IVB4 645 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 DCAF11Q8TEB1 546 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 CHMP4AQ9BY43 222 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 MRPL18Q9H0U6 180 aaKnown RBP5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 RAXQ9Y2V3 346 aa5.87□□□□□ -1.47
CLNS1A-208ENST00000527265 RBM47A0AV96 593 aaKnown RBP5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 MED26O95402 600 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 SKIP12755 728 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 HIF1AQ16665 826 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 C1orf53Q5VUE5 145 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 HSH2DQ96JZ2 352 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 FRRS1LQ9P0K9 344 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 STOML1Q9UBI4 398 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 NAGPAQ9UK23 515 aa5.86□□□□□ -1.47
CLNS1A-208ENST00000527265 CDCA8Q53HL2 280 aa5.85□□□□□ -1.47
CLNS1A-208ENST00000527265 ELMSAN1Q6PJG2 1045 aa5.85□□□□□ -1.47
CLNS1A-208ENST00000527265 ILDR2Q71H61 639 aa5.85□□□□□ -1.47
CLNS1A-208ENST00000527265 VRTNQ9H8Y1 702 aa5.85□□□□□ -1.47
CLNS1A-208ENST00000527265 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.85□□□□□ -1.47
CLNS1A-208ENST00000527265 USP17L3A6NCW0 530 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 USP17L4A6NCW7 530 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 TMEM88BA6NKF7 163 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 USP17L5A8MUK1 530 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 CPB1P15086 417 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 GLB1P16278 677 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 EML3Q32P44 896 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 USP17L2Q6R6M4 530 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 USP17L1Q7RTZ2 530 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 DEPDC4Q8N2C3 294 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 TMEM130Q8N3G9 435 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 C7orf43Q8WVR3 580 aa5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 KIAA1522Q9P206 1035 aaPredicted RBP5.84□□□□□ -1.47
CLNS1A-208ENST00000527265 DHX15O43143 795 aaKnown RBP5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 OGFOD2Q6N063 350 aa5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 PLEKHM2Q8IWE5 1019 aa5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 SUSD3Q96L08 255 aa5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 ZNF358Q9NW07 568 aa5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 GNEQ9Y223 722 aaKnown RBP5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 NOD1Q9Y239 953 aa5.83□□□□□ -1.48
CLNS1A-208ENST00000527265 DLL1O00548 723 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 ALX3O95076 343 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 NFKB1P19838 968 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 SPINK2P20155 84 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 PSMA6P60900 246 aaKnown RBP5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 TBCELQ5QJ74 424 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 KANK4Q5T7N3 995 aaPredicted RBP5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 PHACTR1Q9C0D0 580 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 PCDHGA11Q9Y5H2 935 aa5.82□□□□□ -1.48
CLNS1A-208ENST00000527265 F8W735 103 aaPredicted RBP5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 ATG7O95352 703 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 C8AP07357 584 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 ARID4AP29374 1257 aaPredicted RBP5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 GTF2IP78347 998 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 NCOA4Q13772 614 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 CCINQ13939 588 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 BTLAQ7Z6A9 289 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 TXNDC2Q86VQ3 553 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 DTX1Q86Y01 620 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 MRRFQ96E11 262 aaKnown RBP5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 ASIC4Q96FT7 647 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 LPIN3Q9BQK8 851 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 SRA1Q9HD15 236 aaKnown RBP5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 ADGRE2Q9UHX3 823 aa5.81□□□□□ -1.48
CLNS1A-208ENST00000527265 DEAF1O75398 565 aaPredicted RBP5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 EPB42P16452 691 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 HIRAP54198 1017 aaPredicted RBP5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 NFIAQ12857 509 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 SH3PXD2AQ5TCZ1 1133 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 ZDHHC13Q8IUH4 622 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 TNS4Q8IZW8 715 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 ZNF280CQ8ND82 737 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 TTC9Q92623 222 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 GSX2Q9BZM3 304 aa5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 MKRN1Q9UHC7 482 aaKnown RBP5.8□□□□□ -1.48
CLNS1A-208ENST00000527265 HCN4Q9Y3Q4 1203 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms