RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 LRP10Q7Z4F1 713 aa13.88□□□□□ -0.19
LINC01001-201ENST00000526704 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
LINC01001-201ENST00000526704 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
LINC01001-201ENST00000526704 KRT85P78386 507 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 TSGA10IPQ3SY00 556 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 TTC12Q9H892 705 aaPredicted RBP13.87□□□□□ -0.19
LINC01001-201ENST00000526704 HMG20BQ9P0W2 317 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 DBNLQ9UJU6 430 aaKnown RBP13.87□□□□□ -0.19
LINC01001-201ENST00000526704 TJP1Q07157 1748 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 TAF5LO75529 589 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 RFX5P48382 616 aaPredicted RBP13.87□□□□□ -0.19
LINC01001-201ENST00000526704 FAM173BQ6P4H8 233 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 COPS6Q7L5N1 327 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 COPRSQ9NQ92 184 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
LINC01001-201ENST00000526704 ZNF609O15014 1411 aa13.87□□□□□ -0.19
LINC01001-201ENST00000526704 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
LINC01001-201ENST00000526704 PDCP20941 246 aa13.86□□□□□ -0.19
LINC01001-201ENST00000526704 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
LINC01001-201ENST00000526704 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
LINC01001-201ENST00000526704 RFX7Q2KHR2 1363 aa13.86□□□□□ -0.19
LINC01001-201ENST00000526704 PHKG2P15735 406 aa13.86□□□□□ -0.19
LINC01001-201ENST00000526704 ZNF496Q96IT1 587 aaPredicted RBP13.86□□□□□ -0.19
LINC01001-201ENST00000526704 DYNC1I1O14576 645 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 LIG1P18858 919 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 ATP5JP18859 108 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
LINC01001-201ENST00000526704 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
LINC01001-201ENST00000526704 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 ZC3H6P61129 1189 aaKnown RBP13.85□□□□□ -0.19
LINC01001-201ENST00000526704 TFCP2Q12800 502 aa13.85□□□□□ -0.19
LINC01001-201ENST00000526704 CCDC192P0DO97 292 aa13.84□□□□□ -0.19
LINC01001-201ENST00000526704 PIP4K2AP48426 406 aaPredicted RBP13.84□□□□□ -0.19
LINC01001-201ENST00000526704 STK3Q13188 491 aa13.84□□□□□ -0.19
LINC01001-201ENST00000526704 NOLC1Q14978 699 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC01001-201ENST00000526704 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
LINC01001-201ENST00000526704 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
LINC01001-201ENST00000526704 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
LINC01001-201ENST00000526704 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
LINC01001-201ENST00000526704 ANKRD13DQ6ZTN6 518 aa13.84□□□□□ -0.19
LINC01001-201ENST00000526704 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
LINC01001-201ENST00000526704 CHGBP05060 677 aa13.83□□□□□ -0.19
LINC01001-201ENST00000526704 MAP3K11Q16584 847 aa13.83□□□□□ -0.19
LINC01001-201ENST00000526704 GTF3C6Q969F1 213 aa13.83□□□□□ -0.19
LINC01001-201ENST00000526704 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.19
LINC01001-201ENST00000526704 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.19
LINC01001-201ENST00000526704 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
LINC01001-201ENST00000526704 KRT32Q14532 448 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 UBE3BQ7Z3V4 1068 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 KCNF1Q9H3M0 494 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 CHMP3Q9Y3E7 222 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
LINC01001-201ENST00000526704 JAK2O60674 1132 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 FAM200AQ8TCP9 573 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
LINC01001-201ENST00000526704 SNRPA1P09661 255 aaKnown RBP13.82□□□□□ -0.2
LINC01001-201ENST00000526704 TYRO3Q06418 890 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 CAMK4Q16566 473 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 MYRIPQ8NFW9 859 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 LEO1Q8WVC0 666 aaPredicted RBP13.82□□□□□ -0.2
LINC01001-201ENST00000526704 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 SEC62Q99442 399 aaKnown RBP13.82□□□□□ -0.2
LINC01001-201ENST00000526704 DBNDD2Q9BQY9 259 aa13.82□□□□□ -0.2
LINC01001-201ENST00000526704 DNTTIP2Q5QJE6 756 aaKnown RBP13.81□□□□□ -0.2
LINC01001-201ENST00000526704 IFNL2Q8IZJ0 200 aa13.81□□□□□ -0.2
LINC01001-201ENST00000526704 NEK1Q96PY6 1258 aa13.81□□□□□ -0.2
LINC01001-201ENST00000526704 DNAJC2Q99543 621 aaKnown RBP13.81□□□□□ -0.2
LINC01001-201ENST00000526704 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
LINC01001-201ENST00000526704 CASP7P55210 303 aa13.81□□□□□ -0.2
LINC01001-201ENST00000526704 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
LINC01001-201ENST00000526704 HAUS7Q99871 368 aa13.81□□□□□ -0.2
LINC01001-201ENST00000526704 DACT1Q9NYF0 836 aa13.81□□□□□ -0.2
LINC01001-201ENST00000526704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01001-201ENST00000526704 CYP21A2P08686 494 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 RESTQ13127 1097 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 RBM43Q6ZSC3 357 aaKnown RBP13.8□□□□□ -0.2
LINC01001-201ENST00000526704 Q6ZUG5 572 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
LINC01001-201ENST00000526704 ATP5J2-PTCD1G3V325 749 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 CYP27B1O15528 508 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
LINC01001-201ENST00000526704 TTC5Q8N0Z6 440 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 BRF1Q92994 677 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 TNMDQ9H2S6 317 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
LINC01001-201ENST00000526704 DDX46Q7L014 1031 aaKnown RBP13.79□□□□□ -0.2
LINC01001-201ENST00000526704 CKAP2LQ8IYA6 745 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 SPC24Q8NBT2 197 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 PGBD1Q96JS3 809 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms