RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 NEXNQ0ZGT2 675 aa14.23□□□□□ -0.13
SNRNP35-203ENST00000526639 CDCA7LQ96GN5 454 aa14.23□□□□□ -0.13
SNRNP35-203ENST00000526639 SNED1Q8TER0 1413 aa14.23□□□□□ -0.13
SNRNP35-203ENST00000526639 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 CCDC85AQ96PX6 553 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 TMX4Q9H1E5 349 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 ATP6V0A2Q9Y487 856 aa14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 BBOX1O75936 387 aa14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 DDNO94850 711 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 PCCAP05165 728 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 IARSP41252 1262 aaKnown RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 GRAPQ13588 217 aa14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 SF3B3Q15393 1217 aaKnown RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 GRAPLQ8TC17 118 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 CELF1Q92879 486 aaKnown RBP14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 PSMD1Q99460 953 aa14.22□□□□□ -0.13
SNRNP35-203ENST00000526639 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.13
SNRNP35-203ENST00000526639 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
SNRNP35-203ENST00000526639 F6X3S4 739 aa14.21□□□□□ -0.13
SNRNP35-203ENST00000526639 TOMM70O94826 608 aa14.21□□□□□ -0.13
SNRNP35-203ENST00000526639 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
SNRNP35-203ENST00000526639 E9PSI1 815 aa14.2□□□□□ -0.14
SNRNP35-203ENST00000526639 DNAAF4Q8WXU2 420 aa14.2□□□□□ -0.14
SNRNP35-203ENST00000526639 SEC31BQ9NQW1 1179 aa14.2□□□□□ -0.14
SNRNP35-203ENST00000526639 SLFN5Q08AF3 891 aa14.2□□□□□ -0.14
SNRNP35-203ENST00000526639 SP8Q8IXZ3 490 aa14.2□□□□□ -0.14
SNRNP35-203ENST00000526639 COL4A1P02462 1669 aa14.19□□□□□ -0.14
SNRNP35-203ENST00000526639 POTECB2RU33 542 aa14.19□□□□□ -0.14
SNRNP35-203ENST00000526639 PDE8AO60658 829 aa14.19□□□□□ -0.14
SNRNP35-203ENST00000526639 TPRNQ4KMQ1 711 aa14.19□□□□□ -0.14
SNRNP35-203ENST00000526639 JDP2Q8WYK2 163 aa14.19□□□□□ -0.14
SNRNP35-203ENST00000526639 VEGFAP15692 232 aaPredicted RBP14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 AOC3Q16853 763 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 DPP8Q6V1X1 898 aaPredicted RBP14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 UBE3BQ7Z3V4 1068 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 LARGE2Q8N3Y3 721 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 MPNDQ8N594 471 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 COL4A5P29400 1685 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 GCKRQ14397 625 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
SNRNP35-203ENST00000526639 FZD9O00144 591 aa14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 PPIP5K2O43314 1243 aa14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 HSP90B1P14625 803 aaKnown RBP14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 RPS8P62241 208 aaKnown RBP14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 PODXL2Q9NZ53 605 aa14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 NSFL1CQ9UNZ2 370 aaKnown RBP14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 CACNA1FO60840 1977 aa14.17□□□□□ -0.14
SNRNP35-203ENST00000526639 LINS1Q8NG48 757 aa14.16□□□□□ -0.14
SNRNP35-203ENST00000526639 BCL2L13Q9BXK5 485 aa14.16□□□□□ -0.14
SNRNP35-203ENST00000526639 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
SNRNP35-203ENST00000526639 H7C1W4 665 aa14.16□□□□□ -0.14
SNRNP35-203ENST00000526639 SLC4A10Q6U841 1118 aa14.16□□□□□ -0.14
SNRNP35-203ENST00000526639 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
SNRNP35-203ENST00000526639 CTSWP56202 376 aa14.15□□□□□ -0.14
SNRNP35-203ENST00000526639 BEND3Q5T5X7 828 aa14.15□□□□□ -0.14
SNRNP35-203ENST00000526639 TTLL11Q8NHH1 800 aa14.15□□□□□ -0.14
SNRNP35-203ENST00000526639 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
SNRNP35-203ENST00000526639 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
SNRNP35-203ENST00000526639 HSPA6P17066 643 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 TMC4Q7Z404 712 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 RBM46Q8TBY0 533 aaKnown RBP14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 SSH1Q8WYL5 1049 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 GJA3Q9Y6H8 435 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 WDR90Q96KV7 1748 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 EIF6P56537 245 aaKnown RBP14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 GPSM2P81274 684 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 NIM1KQ8IY84 436 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 TRMT2AQ8IZ69 625 aaKnown RBP14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 MRPL50Q8N5N7 158 aaKnown RBP14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 SUPT20HQ8NEM7 779 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 GREM2Q9H772 168 aa14.14□□□□□ -0.15
SNRNP35-203ENST00000526639 GPR101Q96P66 508 aaPredicted RBP14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 POLLQ9UGP5 575 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 PCNTO95613 3336 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 C6orf229H3BNL8 230 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 CASP7P55210 303 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 GPC2Q8N158 579 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 ANKIB1Q9P2G1 1089 aa14.13□□□□□ -0.15
SNRNP35-203ENST00000526639 KIAA2012Q0VF49 1180 aa14.12□□□□□ -0.15
SNRNP35-203ENST00000526639 WASHC4Q2M389 1173 aa14.12□□□□□ -0.15
SNRNP35-203ENST00000526639 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
SNRNP35-203ENST00000526639 DUOX1Q9NRD9 1551 aa14.12□□□□□ -0.15
SNRNP35-203ENST00000526639 LRRC37AA6NMS7 1700 aa14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 VPS33BQ9H267 617 aa14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 EAPPQ56P03 285 aaPredicted RBP14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 TBC1D16Q8TBP0 767 aa14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 SRCIN1Q9C0H9 1055 aa14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 C9orf78Q9NZ63 289 aaPredicted RBP14.11□□□□□ -0.15
SNRNP35-203ENST00000526639 ZNRF3Q9ULT6 936 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms