RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
DEPDC1-205ENST00000525124 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 NUP98P52948 1817 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 LMNB1P20700 586 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 KCNC4Q03721 635 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 SCN4AP35499 1836 aa11.23□□□□□ -0.61
DEPDC1-205ENST00000525124 H0YIN7 160 aa11.22□□□□□ -0.61
DEPDC1-205ENST00000525124 CARMIL3Q8ND23 1372 aa11.22□□□□□ -0.61
DEPDC1-205ENST00000525124 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
DEPDC1-205ENST00000525124 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1-205ENST00000525124 TSR3Q9UJK0 312 aaKnown RBP11.22□□□□□ -0.61
DEPDC1-205ENST00000525124 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
DEPDC1-205ENST00000525124 U2SURPO15042 1029 aaKnown RBP11.21□□□□□ -0.61
DEPDC1-205ENST00000525124 CANXP27824 592 aaKnown RBP11.21□□□□□ -0.61
DEPDC1-205ENST00000525124 NBR1Q14596 966 aa11.21□□□□□ -0.61
DEPDC1-205ENST00000525124 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
DEPDC1-205ENST00000525124 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
DEPDC1-205ENST00000525124 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 PDE6BP35913 854 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 PDIA6Q15084 440 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 TBC1D9BQ66K14 1250 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 C2CD5Q86YS7 1000 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 LRCH3Q96II8 777 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
DEPDC1-205ENST00000525124 NFKBIEO00221 500 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 PRELPP51888 382 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 RASSF7Q02833 373 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 PRR5LQ6MZQ0 368 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 SMC1BQ8NDV3 1235 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 NUDCQ9Y266 331 aa11.19□□□□□ -0.62
DEPDC1-205ENST00000525124 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 MAP3K7O43318 606 aa11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 PRKAR2BP31323 418 aa11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 PACS2Q86VP3 889 aa11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
DEPDC1-205ENST00000525124 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
DEPDC1-205ENST00000525124 SETDB2Q96T68 719 aa11.17□□□□□ -0.62
DEPDC1-205ENST00000525124 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
DEPDC1-205ENST00000525124 A1BGP04217 495 aa11.16□□□□□ -0.62
DEPDC1-205ENST00000525124 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
DEPDC1-205ENST00000525124 STYK1Q6J9G0 422 aa11.16□□□□□ -0.62
DEPDC1-205ENST00000525124 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
DEPDC1-205ENST00000525124 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
DEPDC1-205ENST00000525124 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
DEPDC1-205ENST00000525124 PCNTO95613 3336 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 KLRG2A4D1S0 409 aaPredicted RBP11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 KCNQ3O43525 872 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 SRGNP10124 158 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 PPP2R1AP30153 589 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 ST5P78524 1137 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 CNBD1Q8NA66 436 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 ZNF622Q969S3 477 aaKnown RBP eCLIP11.15□□□□□ -0.623e-8■□□□□ 8.8
DEPDC1-205ENST00000525124 MASTLQ96GX5 879 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 USP16Q9Y5T5 823 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 ANKRD36CQ5JPF3 1778 aa11.15□□□□□ -0.62
DEPDC1-205ENST00000525124 ADAMTSL1Q8N6G6 1762 aa11.14□□□□□ -0.63
DEPDC1-205ENST00000525124 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-205ENST00000525124 POTECB2RU33 542 aa11.14□□□□□ -0.63
DEPDC1-205ENST00000525124 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
DEPDC1-205ENST00000525124 ZNF652Q9Y2D9 606 aa11.14□□□□□ -0.63
DEPDC1-205ENST00000525124 RIC1Q4ADV7 1423 aa11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 SMAPO00193 183 aa11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 C21orf2O43822 256 aa11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 U2AF1L5P0DN76 240 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 U2AF1Q01081 240 aaKnown RBP eCLIP11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-205ENST00000525124 PRSS12P56730 875 aa11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 PPP4CP60510 307 aa11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 PRPF40BQ6NWY9 871 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 MCM10Q7L590 875 aa11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 C7orf43Q8WVR3 580 aa11.12□□□□□ -0.63
DEPDC1-205ENST00000525124 LAMB2P55268 1798 aa11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 PRAMEF22A3QJZ6 481 aa11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 NPR1P16066 1061 aa11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 HTRA3P83110 453 aa11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
DEPDC1-205ENST00000525124 TRPM7Q96QT4 1865 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms