RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 MEIS3Q99687 375 aa9.81□□□□□ -0.84
NPAS4-202ENST00000524617 C9orf78Q9NZ63 289 aaPredicted RBP9.81□□□□□ -0.84
NPAS4-202ENST00000524617 ZBTB7BO15156 539 aaPredicted RBP9.8□□□□□ -0.84
NPAS4-202ENST00000524617 GNAI3P08754 354 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 DPEP1P16444 411 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 CHRNA5P30532 468 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 FOXO4P98177 505 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 C2CD5Q86YS7 1000 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 ITPRIPQ8IWB1 547 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 ANKRD44Q8N8A2 993 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 TTLL11Q8NHH1 800 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 DDX19BQ9UMR2 479 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 SNED1Q8TER0 1413 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 COL4A1P02462 1669 aa9.8□□□□□ -0.84
NPAS4-202ENST00000524617 LRRC37AA6NMS7 1700 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 H0YIN7 160 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 UBTFL1P0CB47 393 aaPredicted RBP9.79□□□□□ -0.84
NPAS4-202ENST00000524617 MTX1Q13505 466 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 CCDC152Q4G0S7 254 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
NPAS4-202ENST00000524617 EPHA10Q5JZY3 1008 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 JARID2Q92833 1246 aaPredicted RBP9.79□□□□□ -0.84
NPAS4-202ENST00000524617 HDAC5Q9UQL6 1122 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 MYH3P11055 1940 aa9.79□□□□□ -0.84
NPAS4-202ENST00000524617 A0A0G2JLW4 131 aa9.78□□□□□ -0.84
NPAS4-202ENST00000524617 GRAPQ13588 217 aa9.78□□□□□ -0.84
NPAS4-202ENST00000524617 GRAPLQ8TC17 118 aaPredicted RBP9.78□□□□□ -0.84
NPAS4-202ENST00000524617 CNKSR1Q969H4 720 aa9.78□□□□□ -0.84
NPAS4-202ENST00000524617 RBM17Q96I25 401 aaKnown RBP9.78□□□□□ -0.84
NPAS4-202ENST00000524617 BICC1Q9H694 974 aaKnown RBP9.78□□□□□ -0.84
NPAS4-202ENST00000524617 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
NPAS4-202ENST00000524617 COG6Q9Y2V7 657 aa9.78□□□□□ -0.84
NPAS4-202ENST00000524617 GNAI2P04899 355 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 ALDH1B1P30837 517 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 FAM161AQ3B820 660 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 DDX46Q7L014 1031 aaKnown RBP9.77□□□□□ -0.85
NPAS4-202ENST00000524617 TMC4Q7Z404 712 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 TTLL6Q8N841 843 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 C7orf43Q8WVR3 580 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 RPGRQ92834 1020 aaKnown RBP9.77□□□□□ -0.85
NPAS4-202ENST00000524617 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
NPAS4-202ENST00000524617 GREM2Q9H772 168 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 ZBTB40Q9NUA8 1239 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
NPAS4-202ENST00000524617 LRRFIP2Q9Y608 721 aaKnown RBP9.77□□□□□ -0.85
NPAS4-202ENST00000524617 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
NPAS4-202ENST00000524617 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
NPAS4-202ENST00000524617 ITGA6P23229 1130 aa9.76□□□□□ -0.85
NPAS4-202ENST00000524617 RFX5P48382 616 aaPredicted RBP9.76□□□□□ -0.85
NPAS4-202ENST00000524617 PRPF40BQ6NWY9 871 aaKnown RBP9.76□□□□□ -0.85
NPAS4-202ENST00000524617 LMBR1LQ6UX01 489 aa9.76□□□□□ -0.85
NPAS4-202ENST00000524617 CELF1Q92879 486 aaKnown RBP9.76□□□□□ -0.85
NPAS4-202ENST00000524617 SEC31BQ9NQW1 1179 aa9.76□□□□□ -0.85
NPAS4-202ENST00000524617 SRCAPQ6ZRS2 3230 aa9.76□□□□□ -0.85
NPAS4-202ENST00000524617 LTBP1Q14766 1721 aa9.76□□□□□ -0.85
NPAS4-202ENST00000524617 BBOX1O75936 387 aa9.75□□□□□ -0.85
NPAS4-202ENST00000524617 AAMPQ13685 434 aa9.75□□□□□ -0.85
NPAS4-202ENST00000524617 DALRD3Q5D0E6 543 aaKnown RBP9.75□□□□□ -0.85
NPAS4-202ENST00000524617 ZNF622Q969S3 477 aaKnown RBP eCLIP9.75□□□□□ -0.85
NPAS4-202ENST00000524617 CDC5LQ99459 802 aaKnown RBP9.75□□□□□ -0.85
NPAS4-202ENST00000524617 DUOX1Q9NRD9 1551 aa9.75□□□□□ -0.85
NPAS4-202ENST00000524617 SLX4Q8IY92 1834 aa9.75□□□□□ -0.85
NPAS4-202ENST00000524617 ANKRD18BA2A2Z9 1011 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 PPEF1O14829 653 aaPredicted RBP9.74□□□□□ -0.85
NPAS4-202ENST00000524617 IFIT5Q13325 482 aaKnown RBP9.74□□□□□ -0.85
NPAS4-202ENST00000524617 POLA2Q14181 598 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 SOGA3Q5TF21 947 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 CEP85Q6P2H3 762 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 CRBNQ96SW2 442 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 BSDC1Q9NW68 430 aaPredicted RBP9.74□□□□□ -0.85
NPAS4-202ENST00000524617 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 ATP6V0A2Q9Y487 856 aa9.74□□□□□ -0.85
NPAS4-202ENST00000524617 YBX3P16989 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
NPAS4-202ENST00000524617 RPS8P62241 208 aaKnown RBP9.73□□□□□ -0.85
NPAS4-202ENST00000524617 PTPN12Q05209 780 aaKnown RBP9.73□□□□□ -0.85
NPAS4-202ENST00000524617 CCDC57Q2TAC2 916 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 GRIPAP1Q4V328 841 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 ANKRD18AQ8IVF6 992 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 SP8Q8IXZ3 490 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 SSH3Q8TE77 659 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
NPAS4-202ENST00000524617 COPRSQ9NQ92 184 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 LTBP3Q9NS15 1303 aa9.73□□□□□ -0.85
NPAS4-202ENST00000524617 PNMA6EA0A0J9YXQ4 647 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
NPAS4-202ENST00000524617 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 CCDC93Q567U6 631 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 SLC51AQ86UW1 340 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 RPAP2Q8IXW5 612 aaPredicted RBP9.72□□□□□ -0.85
NPAS4-202ENST00000524617 RTFDC1Q9BY42 306 aaPredicted RBP9.72□□□□□ -0.85
NPAS4-202ENST00000524617 C1orf115Q9H7X2 142 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 BCS1LQ9Y276 419 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 A0A1B0GUL6 1792 aa9.72□□□□□ -0.85
NPAS4-202ENST00000524617 CACNA1SQ13698 1873 aa9.71□□□□□ -0.85
NPAS4-202ENST00000524617 FER1L6Q2WGJ9 1857 aa9.71□□□□□ -0.85
NPAS4-202ENST00000524617 SRGAP3O43295 1099 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms