RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 PSME4Q14997 1843 aa12.62□□□□□ -0.39
MMP3-203ENST00000524478 DGKZQ13574 1117 aa12.62□□□□□ -0.39
MMP3-203ENST00000524478 ZNF34Q8IZ26 560 aa12.62□□□□□ -0.39
MMP3-203ENST00000524478 RTFDC1Q9BY42 306 aaPredicted RBP12.62□□□□□ -0.39
MMP3-203ENST00000524478 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
MMP3-203ENST00000524478 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
MMP3-203ENST00000524478 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
MMP3-203ENST00000524478 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
MMP3-203ENST00000524478 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
MMP3-203ENST00000524478 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
MMP3-203ENST00000524478 ZNF408Q9H9D4 720 aa12.61□□□□□ -0.39
MMP3-203ENST00000524478 ZNRF3Q9ULT6 936 aa12.61□□□□□ -0.39
MMP3-203ENST00000524478 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
MMP3-203ENST00000524478 YDJCA8MPS7 323 aa12.6□□□□□ -0.39
MMP3-203ENST00000524478 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
MMP3-203ENST00000524478 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
MMP3-203ENST00000524478 ZNF646O15015 1829 aaPredicted RBP12.6□□□□□ -0.39
MMP3-203ENST00000524478 FAM155AB1AL88 458 aaPredicted RBP12.59□□□□□ -0.39
MMP3-203ENST00000524478 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
MMP3-203ENST00000524478 RAD17O75943 681 aa12.59□□□□□ -0.39
MMP3-203ENST00000524478 EGFRP00533 1210 aa12.59□□□□□ -0.39
MMP3-203ENST00000524478 MYL6BP14649 208 aa12.59□□□□□ -0.39
MMP3-203ENST00000524478 SOX10P56693 466 aa12.59□□□□□ -0.39
MMP3-203ENST00000524478 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
MMP3-203ENST00000524478 KIAA2012Q0VF49 1180 aa12.59□□□□□ -0.39
MMP3-203ENST00000524478 TAF7Q15545 349 aaPredicted RBP12.59□□□□□ -0.39
MMP3-203ENST00000524478 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
MMP3-203ENST00000524478 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
MMP3-203ENST00000524478 NOGQ13253 232 aa12.58□□□□□ -0.4
MMP3-203ENST00000524478 PROSER3Q2NL68 480 aa12.58□□□□□ -0.4
MMP3-203ENST00000524478 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
MMP3-203ENST00000524478 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
MMP3-203ENST00000524478 PPP2R1AP30153 589 aa12.57□□□□□ -0.4
MMP3-203ENST00000524478 HUNKP57058 714 aa12.57□□□□□ -0.4
MMP3-203ENST00000524478 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
MMP3-203ENST00000524478 ZC3H15Q8WU90 426 aaKnown RBP12.57□□□□□ -0.4
MMP3-203ENST00000524478 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
MMP3-203ENST00000524478 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
MMP3-203ENST00000524478 DDX10Q13206 875 aaKnown RBP12.56□□□□□ -0.4
MMP3-203ENST00000524478 PDIA6Q15084 440 aa12.56□□□□□ -0.4
MMP3-203ENST00000524478 DPP8Q6V1X1 898 aaPredicted RBP12.56□□□□□ -0.4
MMP3-203ENST00000524478 CDC37L1Q7L3B6 337 aa12.56□□□□□ -0.4
MMP3-203ENST00000524478 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
MMP3-203ENST00000524478 ERBB4Q15303 1308 aa12.56□□□□□ -0.4
MMP3-203ENST00000524478 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
MMP3-203ENST00000524478 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 ANXA1P04083 346 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 SAGE1Q9NXZ1 904 aa12.55□□□□□ -0.4
MMP3-203ENST00000524478 PSMD14O00487 310 aa12.54□□□□□ -0.4
MMP3-203ENST00000524478 HCLS1P14317 486 aaPredicted RBP12.54□□□□□ -0.4
MMP3-203ENST00000524478 PPP1R42Q7Z4L9 355 aa12.54□□□□□ -0.4
MMP3-203ENST00000524478 MPNDQ8N594 471 aa12.54□□□□□ -0.4
MMP3-203ENST00000524478 NLRP3Q96P20 1036 aa12.54□□□□□ -0.4
MMP3-203ENST00000524478 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
MMP3-203ENST00000524478 CNOT7Q9UIV1 285 aaKnown RBP12.54□□□□□ -0.4
MMP3-203ENST00000524478 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
MMP3-203ENST00000524478 GRAPQ13588 217 aa12.53□□□□□ -0.4
MMP3-203ENST00000524478 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
MMP3-203ENST00000524478 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
MMP3-203ENST00000524478 SP8Q8IXZ3 490 aa12.53□□□□□ -0.4
MMP3-203ENST00000524478 MIER1Q8N108 512 aa12.53□□□□□ -0.4
MMP3-203ENST00000524478 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
MMP3-203ENST00000524478 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
MMP3-203ENST00000524478 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
MMP3-203ENST00000524478 SLC10A3P09131 477 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 KIF23Q02241 960 aaPredicted RBP12.52□□□□□ -0.41
MMP3-203ENST00000524478 TNIP1Q15025 636 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 TBC1D10BQ4KMP7 808 aaPredicted RBP12.52□□□□□ -0.41
MMP3-203ENST00000524478 NLRP10Q86W26 655 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
MMP3-203ENST00000524478 ZNF428Q96B54 188 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 RNF186Q9NXI6 227 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 SPEF2Q9C093 1822 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 ZNF609O15014 1411 aa12.52□□□□□ -0.41
MMP3-203ENST00000524478 LAMB1P07942 1786 aa12.51□□□□□ -0.41
MMP3-203ENST00000524478 TRPA1O75762 1119 aa12.51□□□□□ -0.41
MMP3-203ENST00000524478 BBOX1O75936 387 aa12.51□□□□□ -0.41
MMP3-203ENST00000524478 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
MMP3-203ENST00000524478 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
MMP3-203ENST00000524478 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
MMP3-203ENST00000524478 CEP290O15078 2479 aa12.5□□□□□ -0.41
MMP3-203ENST00000524478 NFE2L2Q16236 605 aa12.5□□□□□ -0.41
MMP3-203ENST00000524478 DPF2Q92785 391 aa12.5□□□□□ -0.41
MMP3-203ENST00000524478 GGA3Q9NZ52 723 aa12.5□□□□□ -0.41
MMP3-203ENST00000524478 KIAA0100Q14667 2235 aaKnown RBP12.5□□□□□ -0.41
MMP3-203ENST00000524478 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
MMP3-203ENST00000524478 H7C1D1 291 aa12.49□□□□□ -0.41
MMP3-203ENST00000524478 ECE2O60344 883 aa12.49□□□□□ -0.41
MMP3-203ENST00000524478 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
MMP3-203ENST00000524478 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
MMP3-203ENST00000524478 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
MMP3-203ENST00000524478 RASAL3Q86YV0 1011 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms