RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 SF3B2Q13435 895 aaKnown RBP5.79□□□□□ -1.48
CSMD1-214ENST00000524177 LAMC2Q13753 1193 aa5.79□□□□□ -1.48
CSMD1-214ENST00000524177 COL9A3Q14050 684 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-214ENST00000524177 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
CSMD1-214ENST00000524177 SLC4A9Q96Q91 983 aa5.79□□□□□ -1.48
CSMD1-214ENST00000524177 ZNF16P17020 682 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-214ENST00000524177 FKBP4Q02790 459 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSMD1-214ENST00000524177 NAA30Q147X3 362 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-214ENST00000524177 GRIK4Q16099 956 aa5.78□□□□□ -1.48
CSMD1-214ENST00000524177 NBPF11Q86T75 865 aa5.78□□□□□ -1.48
CSMD1-214ENST00000524177 KIAA1522Q9P206 1035 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-214ENST00000524177 ATAD2Q6PL18 1390 aa5.78□□□□□ -1.48
CSMD1-214ENST00000524177 SIN3BO75182 1162 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 ALBP02768 609 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 NPR3P17342 541 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 MAPK1P28482 360 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 TRIM28Q13263 835 aaKnown RBP5.77□□□□□ -1.49
CSMD1-214ENST00000524177 TBCELQ5QJ74 424 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 LRRC69Q6ZNQ3 347 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 SLC9A9Q8IVB4 645 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 GIPC2Q8TF65 315 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 ASB16Q96NS5 453 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 NACC1Q96RE7 527 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 SLC30A3Q99726 388 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 BCL2L13Q9BXK5 485 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 IGSF5Q9NSI5 407 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 SCHIP1Q9P0W5 487 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-214ENST00000524177 DCTN4Q9UJW0 460 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 STARD13Q9Y3M8 1113 aa5.77□□□□□ -1.49
CSMD1-214ENST00000524177 ADARB2-AS1A8MUL3 147 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 PPP1R12BO60237 982 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-214ENST00000524177 NID1P14543 1247 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 SFSWAPQ12872 951 aaKnown RBP5.76□□□□□ -1.49
CSMD1-214ENST00000524177 FBXO33Q7Z6M2 555 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 MICALL1Q8N3F8 863 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 ZDHHC1Q8WTX9 485 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 TNFRSF25Q93038 417 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 C2orf49Q9BVC5 232 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-214ENST00000524177 SAP130Q9H0E3 1048 aa5.76□□□□□ -1.49
CSMD1-214ENST00000524177 TNFRSF10BO14763 440 aa5.75□□□□□ -1.49
CSMD1-214ENST00000524177 MPSTP25325 297 aa5.75□□□□□ -1.49
CSMD1-214ENST00000524177 POTEAQ6S8J7 498 aa5.75□□□□□ -1.49
CSMD1-214ENST00000524177 RAB44Q7Z6P3 723 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-214ENST00000524177 STAG2Q8N3U4 1231 aa5.75□□□□□ -1.49
CSMD1-214ENST00000524177 CHMP7Q8WUX9 453 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-214ENST00000524177 PRDM6Q9NQX0 595 aa5.75□□□□□ -1.49
CSMD1-214ENST00000524177 ADH7P40394 386 aa5.74□□□□□ -1.49
CSMD1-214ENST00000524177 PSMA6P60900 246 aaKnown RBP5.74□□□□□ -1.49
CSMD1-214ENST00000524177 TAGLNQ01995 201 aaKnown RBP5.74□□□□□ -1.49
CSMD1-214ENST00000524177 C16orf46Q6P387 395 aa5.74□□□□□ -1.49
CSMD1-214ENST00000524177 RGL4Q8IZJ4 473 aa5.74□□□□□ -1.49
CSMD1-214ENST00000524177 L3MBTL2Q969R5 705 aa5.74□□□□□ -1.49
CSMD1-214ENST00000524177 MRRFQ96E11 262 aaKnown RBP5.74□□□□□ -1.49
CSMD1-214ENST00000524177 QTRT2Q9H974 415 aaKnown RBP5.74□□□□□ -1.49
CSMD1-214ENST00000524177 NEUROD4Q9HD90 331 aa5.74□□□□□ -1.49
CSMD1-214ENST00000524177 EML1O00423 815 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 FAM13AO94988 1023 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 NOS2P35228 1153 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 SPEM2Q0P670 501 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 LRP8Q14114 963 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 COX20Q5RI15 118 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 TRAPPC3LQ5T215 181 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 SH3PXD2AQ5TCZ1 1133 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
CSMD1-214ENST00000524177 C9orf172C9J069 976 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 SELPP16109 830 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 MBTPS1Q14703 1052 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 TEAD4Q15561 434 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 FAM26DQ5JW98 314 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 C20orf204Q6ZNR8 217 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 MYO19Q96H55 970 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 RBCK1Q9BYM8 510 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 LRFN2Q9ULH4 789 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 ZNF232Q9UNY5 417 aa5.72□□□□□ -1.49
CSMD1-214ENST00000524177 FZD6O60353 706 aa5.71□□□□□ -1.5
CSMD1-214ENST00000524177 H2AFB1P0C5Y9 115 aa5.71□□□□□ -1.5
CSMD1-214ENST00000524177 H2AFB2P0C5Z0 115 aa5.71□□□□□ -1.5
CSMD1-214ENST00000524177 EIF1AXP47813 144 aaKnown RBP5.71□□□□□ -1.5
CSMD1-214ENST00000524177 HIRAP54198 1017 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-214ENST00000524177 COL19A1Q14993 1142 aa5.71□□□□□ -1.5
CSMD1-214ENST00000524177 TMC7Q7Z402 723 aa5.71□□□□□ -1.5
CSMD1-214ENST00000524177 ZSCAN29Q8IWY8 852 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-214ENST00000524177 RHPN1Q8TCX5 695 aa5.71□□□□□ -1.5
CSMD1-214ENST00000524177 A0A0A0MRY4 1105 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 HYAL3O43820 417 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-214ENST00000524177 IGHA2P01877 340 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 P4HBP07237 508 aaKnown RBP5.7□□□□□ -1.5
CSMD1-214ENST00000524177 FMR1Q06787 632 aaKnown RBP eCLIP5.7□□□□□ -1.5
CSMD1-214ENST00000524177 NEUROD1Q13562 356 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 SHISA2Q6UWI4 295 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 TXNRD3Q86VQ6 643 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 TP53INP1Q96A56 240 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 BRD7Q9NPI1 651 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 CCDC87Q9NVE4 849 aa5.7□□□□□ -1.5
CSMD1-214ENST00000524177 TREHO43280 583 aa5.69□□□□□ -1.5
CSMD1-214ENST00000524177 NDUFB5O43674 189 aa5.69□□□□□ -1.5
CSMD1-214ENST00000524177 LILRB5O75023 590 aa5.69□□□□□ -1.5
CSMD1-214ENST00000524177 IGSF3O75054 1194 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms