RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 KRT222Q8N1A0 295 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 GTF3C6Q969F1 213 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 RESTQ13127 1097 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
SPIDR-225ENST00000524141 IQCB1Q15051 598 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 CCDC144BQ3MJ40 725 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 KCND1Q9NSA2 647 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 ERO1AQ96HE7 468 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 RGPD8O14715 1765 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-225ENST00000524141 BECN2A8MW95 431 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 SKILP12757 684 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 FAM193AP78312 1265 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
SPIDR-225ENST00000524141 MYH15Q9Y2K3 1946 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 MARF1Q9Y4F3 1742 aaKnown RBP12.06□□□□□ -0.48
SPIDR-225ENST00000524141 GSDMDP57764 484 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 ATL3Q6DD88 541 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 PLPPR3Q6T4P5 718 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 BRF1Q92994 677 aa12.06□□□□□ -0.48
SPIDR-225ENST00000524141 STK3Q13188 491 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 USPL1Q5W0Q7 1092 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 ANO10Q9NW15 660 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 TEFQ10587 303 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 DHX8Q14562 1220 aaKnown RBP12.05□□□□□ -0.48
SPIDR-225ENST00000524141 KSR2Q6VAB6 950 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
SPIDR-225ENST00000524141 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-225ENST00000524141 LLPHQ9BRT6 129 aaKnown RBP12.05□□□□□ -0.48
SPIDR-225ENST00000524141 CCDC66A2RUB6 948 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
SPIDR-225ENST00000524141 ZNF215Q9UL58 517 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-225ENST00000524141 LMO7Q8WWI1 1683 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 ANKARQ7Z5J8 1434 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 KINO60870 393 aaKnown RBP12.04□□□□□ -0.48
SPIDR-225ENST00000524141 SASH1O94885 1247 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 SLFN14P0C7P3 912 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 NAA16Q6N069 864 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-225ENST00000524141 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-225ENST00000524141 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
SPIDR-225ENST00000524141 UTYO14607 1347 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 CCDC69A6NI79 296 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 GRM8O00222 908 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 TAF5LO75529 589 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 C11orf57Q6ZUT1 292 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 BOLA2Q9H3K6 86 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 MRC1P22897 1456 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 JAK2O60674 1132 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 IGSF3O75054 1194 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 SLU7O95391 586 aaKnown RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 CCZ1BP86790 482 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 TERF2Q15554 542 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 NUTM2GQ5VZR2 741 aa12.03□□□□□ -0.48
SPIDR-225ENST00000524141 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
SPIDR-225ENST00000524141 ANXA1P04083 346 aa12.02□□□□□ -0.48
SPIDR-225ENST00000524141 TUBB4AP04350 444 aa12.02□□□□□ -0.48
SPIDR-225ENST00000524141 FAM160A1Q05DH4 1040 aa12.02□□□□□ -0.48
SPIDR-225ENST00000524141 CCAR1Q8IX12 1150 aaKnown RBP12.02□□□□□ -0.48
SPIDR-225ENST00000524141 CCDC8Q9H0W5 538 aaPredicted RBP12.02□□□□□ -0.48
SPIDR-225ENST00000524141 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.48
SPIDR-225ENST00000524141 LTN1O94822 1766 aa12.02□□□□□ -0.48
SPIDR-225ENST00000524141 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 NCAPD2Q15021 1401 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 USP27XA6NNY8 438 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 DDX58O95786 925 aaKnown RBP12.02□□□□□ -0.49
SPIDR-225ENST00000524141 HMGB1P09429 215 aaKnown RBP12.02□□□□□ -0.49
SPIDR-225ENST00000524141 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-225ENST00000524141 SMARCC2Q8TAQ2 1214 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 ZNF396Q96N95 335 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-225ENST00000524141 FAM53CQ9NYF3 392 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 AMOTL2Q9Y2J4 779 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 TAF6LQ9Y6J9 622 aa12.02□□□□□ -0.49
SPIDR-225ENST00000524141 NRDCO43847 1150 aa12.01□□□□□ -0.49
SPIDR-225ENST00000524141 AKAP4Q5JQC9 854 aa12.01□□□□□ -0.49
SPIDR-225ENST00000524141 FILIP1Q7Z7B0 1213 aa12.01□□□□□ -0.49
SPIDR-225ENST00000524141 OSBPL5Q9H0X9 879 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-225ENST00000524141 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
SPIDR-225ENST00000524141 Q6ZUG5 572 aa12.01□□□□□ -0.49
SPIDR-225ENST00000524141 DHX40Q8IX18 779 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms