RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
CDK16-221ENST00000523543 NLRP3Q96P20 1036 aa14□□□□□ -0.17
CDK16-221ENST00000523543 TNRC6CQ9HCJ0 1690 aaKnown RBP14□□□□□ -0.17
CDK16-221ENST00000523543 ATP8B2P98198 1209 aa13.99□□□□□ -0.17
CDK16-221ENST00000523543 POLA2Q14181 598 aa13.99□□□□□ -0.17
CDK16-221ENST00000523543 FAM161AQ3B820 660 aa13.99□□□□□ -0.17
CDK16-221ENST00000523543 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
CDK16-221ENST00000523543 SSH3Q8TE77 659 aa13.99□□□□□ -0.17
CDK16-221ENST00000523543 PNMA6EA0A0J9YXQ4 647 aa13.98□□□□□ -0.17
CDK16-221ENST00000523543 SRGAP3O43295 1099 aa13.98□□□□□ -0.17
CDK16-221ENST00000523543 PDE6BP35913 854 aa13.98□□□□□ -0.17
CDK16-221ENST00000523543 GREM2Q9H772 168 aa13.98□□□□□ -0.17
CDK16-221ENST00000523543 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
CDK16-221ENST00000523543 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
CDK16-221ENST00000523543 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
CDK16-221ENST00000523543 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
CDK16-221ENST00000523543 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 HMMRO75330 724 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 SRGNP10124 158 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 ITGA6P23229 1130 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 IFIT5Q13325 482 aaKnown RBP13.96□□□□□ -0.17
CDK16-221ENST00000523543 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 CCDC85AQ96PX6 553 aaPredicted RBP13.96□□□□□ -0.17
CDK16-221ENST00000523543 CHMP3Q9Y3E7 222 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 CD2APQ9Y5K6 639 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 LRP5O75197 1615 aa13.96□□□□□ -0.17
CDK16-221ENST00000523543 NPR1P16066 1061 aa13.95□□□□□ -0.18
CDK16-221ENST00000523543 PTPN12Q05209 780 aaKnown RBP13.95□□□□□ -0.18
CDK16-221ENST00000523543 COPRSQ9NQ92 184 aa13.95□□□□□ -0.18
CDK16-221ENST00000523543 SEC31BQ9NQW1 1179 aa13.95□□□□□ -0.18
CDK16-221ENST00000523543 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
CDK16-221ENST00000523543 ANKRD18BA2A2Z9 1011 aa13.94□□□□□ -0.18
CDK16-221ENST00000523543 TGFB2P61812 414 aa13.94□□□□□ -0.18
CDK16-221ENST00000523543 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
CDK16-221ENST00000523543 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
CDK16-221ENST00000523543 C2CD5Q86YS7 1000 aa13.94□□□□□ -0.18
CDK16-221ENST00000523543 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
CDK16-221ENST00000523543 CRAMP1Q96RY5 1269 aa13.94□□□□□ -0.18
CDK16-221ENST00000523543 CDC5LQ99459 802 aaKnown RBP13.94□□□□□ -0.18
CDK16-221ENST00000523543 GOLGB1Q14789 3259 aaKnown RBP13.93□□□□□ -0.18
CDK16-221ENST00000523543 H0YIN7 160 aa13.93□□□□□ -0.18
CDK16-221ENST00000523543 GRAPQ13588 217 aa13.93□□□□□ -0.18
CDK16-221ENST00000523543 GRAPLQ8TC17 118 aaPredicted RBP13.93□□□□□ -0.18
CDK16-221ENST00000523543 MASTLQ96GX5 879 aa13.93□□□□□ -0.18
CDK16-221ENST00000523543 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
CDK16-221ENST00000523543 PPP4R2Q9NY27 417 aa13.93□□□□□ -0.18
CDK16-221ENST00000523543 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
CDK16-221ENST00000523543 NOP58Q9Y2X3 529 aaKnown RBP13.93□□□□□ -0.18
CDK16-221ENST00000523543 MYH3P11055 1940 aa13.93□□□□□ -0.18
CDK16-221ENST00000523543 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
CDK16-221ENST00000523543 COL4A1P02462 1669 aa13.92□□□□□ -0.18
CDK16-221ENST00000523543 KCNA3P22001 575 aa13.92□□□□□ -0.18
CDK16-221ENST00000523543 CHRNA5P30532 468 aa13.92□□□□□ -0.18
CDK16-221ENST00000523543 CELF1Q92879 486 aaKnown RBP13.92□□□□□ -0.18
CDK16-221ENST00000523543 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
CDK16-221ENST00000523543 DCTPP1Q9H773 170 aa13.92□□□□□ -0.18
CDK16-221ENST00000523543 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
CDK16-221ENST00000523543 CIAO1O76071 339 aa13.91□□□□□ -0.18
CDK16-221ENST00000523543 IGHDP01880 384 aa13.91□□□□□ -0.18
CDK16-221ENST00000523543 DPEP1P16444 411 aa13.91□□□□□ -0.18
CDK16-221ENST00000523543 RPS8P62241 208 aaKnown RBP13.91□□□□□ -0.18
CDK16-221ENST00000523543 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
CDK16-221ENST00000523543 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
CDK16-221ENST00000523543 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
CDK16-221ENST00000523543 ZNF594Q96JF6 807 aaPredicted RBP13.91□□□□□ -0.18
CDK16-221ENST00000523543 KDM2BQ8NHM5 1336 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 EYA2O00167 538 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 BBOX1O75936 387 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 ALDH1B1P30837 517 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
CDK16-221ENST00000523543 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 SMC5Q8IY18 1101 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
CDK16-221ENST00000523543 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
CDK16-221ENST00000523543 RIPOR2Q9Y4F9 1068 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
CDK16-221ENST00000523543 A0A0G2JLW4 131 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
CDK16-221ENST00000523543 LRRC24Q50LG9 513 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 HSP90AB4PQ58FF6 505 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 ZNF622Q969S3 477 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDK16-221ENST00000523543 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 PUS3Q9BZE2 481 aaKnown RBP13.89□□□□□ -0.19
CDK16-221ENST00000523543 FHDC1Q9C0D6 1143 aaPredicted RBP13.89□□□□□ -0.19
CDK16-221ENST00000523543 SIL1Q9H173 461 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
CDK16-221ENST00000523543 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
CDK16-221ENST00000523543 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
CDK16-221ENST00000523543 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
CDK16-221ENST00000523543 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
CDK16-221ENST00000523543 NLGN2Q8NFZ4 835 aa13.88□□□□□ -0.19
CDK16-221ENST00000523543 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
CDK16-221ENST00000523543 MPHOSPH8Q99549 860 aa13.88□□□□□ -0.19
CDK16-221ENST00000523543 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
CDK16-221ENST00000523543 PPEF1O14829 653 aaPredicted RBP13.87□□□□□ -0.19
CDK16-221ENST00000523543 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms