RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
PCM1-219ENST00000523540 KLK14Q9P0G3 267 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 MARK1Q9P0L2 795 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 DGKZQ13574 1117 aa8.54□□□□□ -1.04
PCM1-219ENST00000523540 ZNF280CQ8ND82 737 aa8.54□□□□□ -1.04
PCM1-219ENST00000523540 HELQQ8TDG4 1101 aa8.54□□□□□ -1.04
PCM1-219ENST00000523540 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
PCM1-219ENST00000523540 BRD2P25440 801 aaKnown RBP8.53□□□□□ -1.04
PCM1-219ENST00000523540 ARTNQ5T4W7 220 aa8.53□□□□□ -1.04
PCM1-219ENST00000523540 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
PCM1-219ENST00000523540 HSH2DQ96JZ2 352 aa8.53□□□□□ -1.04
PCM1-219ENST00000523540 BRD7Q9NPI1 651 aa8.53□□□□□ -1.04
PCM1-219ENST00000523540 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
PCM1-219ENST00000523540 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
PCM1-219ENST00000523540 SPDYE3A6NKU9 549 aa8.52□□□□□ -1.05
PCM1-219ENST00000523540 ARSDP51689 593 aa8.52□□□□□ -1.05
PCM1-219ENST00000523540 FAM26DQ5JW98 314 aa8.52□□□□□ -1.05
PCM1-219ENST00000523540 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
PCM1-219ENST00000523540 PRR12Q9ULL5 1215 aa8.52□□□□□ -1.05
PCM1-219ENST00000523540 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 ABL1P00519 1130 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 NPR3P17342 541 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 INPP5BP32019 993 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 ZNF211Q13398 564 aaPredicted RBP8.51□□□□□ -1.05
PCM1-219ENST00000523540 MTMR3Q13615 1198 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 CEP63Q96MT8 703 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 ANO2Q9NQ90 1003 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 PRDM6Q9NQX0 595 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 STIM2Q9P246 746 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 KCNH4Q9UQ05 1017 aa8.51□□□□□ -1.05
PCM1-219ENST00000523540 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 ICMTO60725 284 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 SIN3BO75182 1162 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
PCM1-219ENST00000523540 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
PCM1-219ENST00000523540 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 PRRT3Q5FWE3 981 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 SYT9Q86SS6 491 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 ETFBKMTQ8IXQ9 262 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
PCM1-219ENST00000523540 MICAL2O94851 1124 aa8.49□□□□□ -1.05
PCM1-219ENST00000523540 APBA3O96018 575 aa8.49□□□□□ -1.05
PCM1-219ENST00000523540 EGFRP00533 1210 aa8.49□□□□□ -1.05
PCM1-219ENST00000523540 IDH3AP50213 366 aa8.49□□□□□ -1.05
PCM1-219ENST00000523540 ECM1Q16610 540 aa8.49□□□□□ -1.05
PCM1-219ENST00000523540 STARD13Q9Y3M8 1113 aa8.49□□□□□ -1.05
PCM1-219ENST00000523540 SOWAHDA6NJG2 315 aa8.48□□□□□ -1.05
PCM1-219ENST00000523540 ZBTB39O15060 712 aa8.48□□□□□ -1.05
PCM1-219ENST00000523540 ALAS2P22557 587 aa8.48□□□□□ -1.05
PCM1-219ENST00000523540 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
PCM1-219ENST00000523540 MPSTP25325 297 aa8.47□□□□□ -1.05
PCM1-219ENST00000523540 PRSS36Q5K4E3 855 aa8.47□□□□□ -1.05
PCM1-219ENST00000523540 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
PCM1-219ENST00000523540 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 H3BRB1 525 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 M0R082 166 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 OPLAHO14841 1288 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 RPLP1P05386 114 aaKnown RBP8.46□□□□□ -1.06
PCM1-219ENST00000523540 NID1P14543 1247 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 SPEM2Q0P670 501 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 SFSWAPQ12872 951 aaKnown RBP8.46□□□□□ -1.06
PCM1-219ENST00000523540 ZNF417Q8TAU3 575 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 NACC1Q96RE7 527 aa8.46□□□□□ -1.06
PCM1-219ENST00000523540 ZNF587Q96SQ5 575 aaPredicted RBP8.46□□□□□ -1.06
PCM1-219ENST00000523540 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
PCM1-219ENST00000523540 FAM13AO94988 1023 aa8.45□□□□□ -1.06
PCM1-219ENST00000523540 MAP3K6O95382 1288 aa8.45□□□□□ -1.06
PCM1-219ENST00000523540 ALBP02768 609 aa8.45□□□□□ -1.06
PCM1-219ENST00000523540 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
PCM1-219ENST00000523540 ALKBH2Q6NS38 261 aa8.45□□□□□ -1.06
PCM1-219ENST00000523540 MICALL1Q8N3F8 863 aa8.45□□□□□ -1.06
PCM1-219ENST00000523540 EIF1AXP47813 144 aaKnown RBP8.44□□□□□ -1.06
PCM1-219ENST00000523540 ARHGAP4P98171 946 aa8.44□□□□□ -1.06
PCM1-219ENST00000523540 CCINQ13939 588 aa8.44□□□□□ -1.06
PCM1-219ENST00000523540 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
PCM1-219ENST00000523540 GLYCTKQ8IVS8 523 aa8.44□□□□□ -1.06
PCM1-219ENST00000523540 GSX2Q9BZM3 304 aa8.44□□□□□ -1.06
PCM1-219ENST00000523540 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 H2AFB2P0C5Z0 115 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
PCM1-219ENST00000523540 GRNP28799 593 aaKnown RBP8.43□□□□□ -1.06
PCM1-219ENST00000523540 ZAP70P43403 619 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 C20orf204Q6ZNR8 217 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 ATCAYQ86WG3 371 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 SLC30A3Q99726 388 aa8.43□□□□□ -1.06
PCM1-219ENST00000523540 TRIM28Q13263 835 aaKnown RBP8.42□□□□□ -1.06
PCM1-219ENST00000523540 GRIK4Q16099 956 aa8.42□□□□□ -1.06
PCM1-219ENST00000523540 PCSK7Q16549 785 aa8.42□□□□□ -1.06
PCM1-219ENST00000523540 PIK3R5Q8WYR1 880 aa8.42□□□□□ -1.06
PCM1-219ENST00000523540 GZF1Q9H116 711 aaPredicted RBP8.42□□□□□ -1.06
PCM1-219ENST00000523540 RTCBQ9Y3I0 505 aaKnown RBP8.42□□□□□ -1.06
PCM1-219ENST00000523540 ADGRE1Q14246 886 aa8.41□□□□□ -1.06
PCM1-219ENST00000523540 FNDC3AQ9Y2H6 1198 aaKnown RBP8.41□□□□□ -1.06
PCM1-219ENST00000523540 FZD6O60353 706 aa8.4□□□□□ -1.06
PCM1-219ENST00000523540 SOX18P35713 384 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms