RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	POLR3D	P05423	398 aa	Predicted RBP	7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	ERCC3	P19447	782 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	RBM25	P49756	843 aa	Known RBP	7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	KRT76	Q01546	638 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	SPEM2	Q0P670	501 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	PDE3B	Q13370	1112 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	ENOX2	Q16206	610 aa	Known RBP	7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	COL13A1	Q5TAT6	717 aa	Predicted RBP	7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	PDE12	Q6L8Q7	609 aa	Known RBP	7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	PI16	Q6UXB8	463 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	SV2A	Q7L0J3	742 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	ZNF438	Q7Z4V0	828 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	GMCL1	Q96IK5	515 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	AMOTL2	Q9Y2J4	779 aa		7.91	□□□□□ -1.14
CTNNA1-238	ENST00000523298	PNMA6F	A0A0J9YX94	578 aa		7.9	□□□□□ -1.14
CTNNA1-238	ENST00000523298	EREG	O14944	169 aa		7.9	□□□□□ -1.14
CTNNA1-238	ENST00000523298	NFKB1	P19838	968 aa		7.9	□□□□□ -1.14
CTNNA1-238	ENST00000523298	IRS1	P35568	1242 aa		7.9	□□□□□ -1.14
CTNNA1-238	ENST00000523298	CCIN	Q13939	588 aa		7.9	□□□□□ -1.14
CTNNA1-238	ENST00000523298	CSRNP1	Q96S65	589 aa		7.9	□□□□□ -1.14
CTNNA1-238	ENST00000523298	EPB42	P16452	691 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	PCSK2	P16519	638 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	LAMC2	Q13753	1193 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	COL19A1	Q14993	1142 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	EAPP	Q56P03	285 aa	Predicted RBP	7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	NLRP13	Q86W25	1043 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	FAM161B	Q96MY7	647 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	ZFYVE28	Q9HCC9	887 aa		7.89	□□□□□ -1.15
CTNNA1-238	ENST00000523298	LDHB	P07195	334 aa	Known RBP	7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	VSIG8	P0DPA2	414 aa		7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	ACPP	P15309	386 aa		7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	FAM182B	Q5T319	152 aa		7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	NPM2	Q86SE8	214 aa	Known RBP	7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	BHMT	Q93088	406 aa		7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	LATS2	Q9NRM7	1088 aa		7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	ABI2	Q9NYB9	513 aa	Predicted RBP	7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	KANSL3	Q9P2N6	904 aa		7.88	□□□□□ -1.15
CTNNA1-238	ENST00000523298	ZBTB42	B2RXF5	422 aa		7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	TERT	O14746	1132 aa	Known RBP	7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	EPS8L3	Q8TE67	593 aa	Known RBP	7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	SNX29	Q8TEQ0	813 aa		7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	DUSP9	Q99956	384 aa	Known RBP	7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNNA1-238	ENST00000523298	PHACTR2	O75167	634 aa		7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	RPLP1	P05386	114 aa	Known RBP	7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	RARA	P10276	462 aa		7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	PCBP4	P57723	403 aa	Known RBP	7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	NFX1	Q12986	1120 aa	Known RBP	7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	LDLRAD1	Q5T700	205 aa		7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	OR13H1	Q8NG92	308 aa		7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	C11orf16	Q9NQ32	467 aa		7.86	□□□□□ -1.15
CTNNA1-238	ENST00000523298	CPNE3	O75131	537 aa	Known RBP	7.85	□□□□□ -1.15
CTNNA1-238	ENST00000523298	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-238	ENST00000523298	CCDC74A	Q96AQ1	378 aa		7.85	□□□□□ -1.15
CTNNA1-238	ENST00000523298	MDFI	Q99750	246 aa		7.85	□□□□□ -1.15
CTNNA1-238	ENST00000523298	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.85	□□□□□ -1.15
CTNNA1-238	ENST00000523298	TRPA1	O75762	1119 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	MLLT1	Q03111	559 aa	Predicted RBP	7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	ADAMTSL4	Q6UY14	1074 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	SYT9	Q86SS6	491 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	CNTNAP3B	Q96NU0	1288 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	TRERF1	Q96PN7	1200 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	CNTNAP3	Q9BZ76	1288 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	NPHS2	Q9NP85	383 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	TLR7	Q9NYK1	1049 aa	Known RBP	7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	PARP2	Q9UGN5	583 aa		7.84	□□□□□ -1.15
CTNNA1-238	ENST00000523298	PRPF40A	O75400	957 aa	Known RBP	7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	MAP3K6	O95382	1288 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	MX2	P20592	715 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	DHX32	Q7L7V1	743 aa	Known RBP	7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	FCHSD1	Q86WN1	690 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	NPAS3	Q8IXF0	933 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	HHIP	Q96QV1	700 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	DNAJC25	Q9H1X3	360 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	SALL4	Q9UJQ4	1053 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	PHF24	Q9UPV7	400 aa		7.83	□□□□□ -1.16
CTNNA1-238	ENST00000523298	BMP4	P12644	408 aa		7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	MRPL58	Q14197	206 aa	Known RBP	7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	HFE2	Q6ZVN8	426 aa		7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	GALNT12	Q8IXK2	581 aa		7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	TTC16	Q8NEE8	873 aa		7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	MRRF	Q96E11	262 aa	Known RBP	7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	NSUN5	Q96P11	429 aa	Known RBP	7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	OSBPL7	Q9BZF2	842 aa		7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298	NAGPA	Q9UK23	515 aa		7.82	□□□□□ -1.16
CTNNA1-238	ENST00000523298		J3QW42	95 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	KIF4A	O95239	1232 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	HOXD8	P13378	290 aa	Predicted RBP	7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	CES1	P23141	567 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	PLAUR	Q03405	335 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	LCE2A	Q5TA79	106 aa	Predicted RBP	7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	FOXR1	Q6PIV2	292 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	PNMA5	Q96PV4	448 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	IGF1R	P08069	1367 aa		7.81	□□□□□ -1.16
CTNNA1-238	ENST00000523298	RECK	O95980	971 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 482.8 ms