RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 IRS4O14654 1257 aaPredicted RBP20.44■□□□□ 0.86
SREK1-212ENST00000522912 MCCP23508 829 aa20.44■□□□□ 0.86
SREK1-212ENST00000522912 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
SREK1-212ENST00000522912 TTLL11Q8NHH1 800 aa20.44■□□□□ 0.86
SREK1-212ENST00000522912 GJD4Q96KN9 370 aaPredicted RBP20.44■□□□□ 0.86
SREK1-212ENST00000522912 AFF2P51816 1311 aa20.44■□□□□ 0.86
SREK1-212ENST00000522912 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
SREK1-212ENST00000522912 NHSQ6T4R5 1651 aa20.44■□□□□ 0.86
SREK1-212ENST00000522912 DDIT3P35638 169 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 CTSWP56202 376 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 KCNQ4P56696 695 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 ANAPC15P60006 121 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 TIMM10P62072 90 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 IL17RAQ96F46 866 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
SREK1-212ENST00000522912 RAD50Q92878 1312 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 ZNF609O15014 1411 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 IFIT5Q13325 482 aaKnown RBP20.43■□□□□ 0.86
SREK1-212ENST00000522912 NEUROD6Q96NK8 337 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
SREK1-212ENST00000522912 HSPA4P34932 840 aa20.42■□□□□ 0.86
SREK1-212ENST00000522912 SUSD4Q5VX71 490 aa20.42■□□□□ 0.86
SREK1-212ENST00000522912 GREM2Q9H772 168 aa20.42■□□□□ 0.86
SREK1-212ENST00000522912 FAM227BQ96M60 508 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 FSD1Q9BTV5 496 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 PDE8AO60658 829 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 FRAT2O75474 233 aaPredicted RBP20.41■□□□□ 0.86
SREK1-212ENST00000522912 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
SREK1-212ENST00000522912 CHMP5Q9NZZ3 219 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 CEP126Q9P2H0 1117 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 NDUFB9Q9Y6M9 179 aa20.41■□□□□ 0.86
SREK1-212ENST00000522912 SBF2Q86WG5 1849 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 HIP1O00291 1037 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 ST18O60284 1047 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 ITGA6P23229 1130 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 KIAA1211Q6ZU35 1233 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 HAUS7Q99871 368 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 ATRNO75882 1429 aa20.4■□□□□ 0.86
SREK1-212ENST00000522912 A0A1B0GUL7 405 aa20.39■□□□□ 0.86
SREK1-212ENST00000522912 PTH1RQ03431 593 aa20.39■□□□□ 0.85
SREK1-212ENST00000522912 FOXD4L1Q9NU39 408 aa20.39■□□□□ 0.85
SREK1-212ENST00000522912 ONECUT3O60422 494 aaPredicted RBP20.38■□□□□ 0.85
SREK1-212ENST00000522912 NEK4P51957 841 aa20.38■□□□□ 0.85
SREK1-212ENST00000522912 DNAJC2Q99543 621 aaKnown RBP20.38■□□□□ 0.85
SREK1-212ENST00000522912 RIPOR2Q9Y4F9 1068 aa20.38■□□□□ 0.85
SREK1-212ENST00000522912 DDX60Q8IY21 1712 aaKnown RBP20.38■□□□□ 0.85
SREK1-212ENST00000522912 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 ANKRD18BA2A2Z9 1011 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 UTP14AQ9BVJ6 771 aaKnown RBP20.37■□□□□ 0.85
SREK1-212ENST00000522912 SNRKQ9NRH2 765 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 RIC1Q4ADV7 1423 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 SH3TC1Q8TE82 1336 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 CNTNAP4Q9C0A0 1308 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
SREK1-212ENST00000522912 HSP90AA1P07900 732 aaKnown RBP20.36■□□□□ 0.85
SREK1-212ENST00000522912 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
SREK1-212ENST00000522912 AK7Q96M32 723 aa20.36■□□□□ 0.85
SREK1-212ENST00000522912 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
SREK1-212ENST00000522912 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
SREK1-212ENST00000522912 SNX14Q9Y5W7 946 aa20.36■□□□□ 0.85
SREK1-212ENST00000522912 LDHAL6AQ6ZMR3 332 aa20.36■□□□□ 0.85
SREK1-212ENST00000522912 RASEFQ8IZ41 740 aa20.36■□□□□ 0.85
SREK1-212ENST00000522912 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
SREK1-212ENST00000522912 CCDC171Q6TFL3 1326 aa20.35■□□□□ 0.85
SREK1-212ENST00000522912 NTSR2O95665 410 aa20.35■□□□□ 0.85
SREK1-212ENST00000522912 SMIM5Q71RC9 77 aa20.35■□□□□ 0.85
SREK1-212ENST00000522912 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
SREK1-212ENST00000522912 LY75O60449 1722 aa20.35■□□□□ 0.85
SREK1-212ENST00000522912 ADORA1P30542 326 aa20.34■□□□□ 0.85
SREK1-212ENST00000522912 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
SREK1-212ENST00000522912 LAMB2P55268 1798 aa20.34■□□□□ 0.85
SREK1-212ENST00000522912 RFX7Q2KHR2 1363 aa20.34■□□□□ 0.85
SREK1-212ENST00000522912 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
SREK1-212ENST00000522912 RC3H1Q5TC82 1133 aaKnown RBP20.34■□□□□ 0.85
SREK1-212ENST00000522912 XAGE2Q96GT9 111 aa20.34■□□□□ 0.85
SREK1-212ENST00000522912 CIZ1Q9ULV3 898 aaPredicted RBP20.34■□□□□ 0.85
SREK1-212ENST00000522912 TAF1LQ8IZX4 1826 aa20.34■□□□□ 0.85
SREK1-212ENST00000522912 CHGBP05060 677 aa20.33■□□□□ 0.85
SREK1-212ENST00000522912 METTL24Q5JXM2 366 aa20.33■□□□□ 0.85
SREK1-212ENST00000522912 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
SREK1-212ENST00000522912 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.85
SREK1-212ENST00000522912 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
SREK1-212ENST00000522912 LRP5O75197 1615 aa20.33■□□□□ 0.84
SREK1-212ENST00000522912 ZNF589Q86UQ0 364 aaPredicted RBP20.32■□□□□ 0.84
SREK1-212ENST00000522912 KBTBD3Q8NAB2 608 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 CNNM1Q9NRU3 951 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 PAG1Q9NWQ8 432 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 GOLIM4O00461 696 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 IFIT1P09914 478 aaKnown RBP20.32■□□□□ 0.84
SREK1-212ENST00000522912 NECTIN1Q15223 517 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 VGLL2Q8N8G2 317 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.32■□□□□ 0.84
SREK1-212ENST00000522912 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 KCNB2Q92953 911 aa20.32■□□□□ 0.84
SREK1-212ENST00000522912 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms