RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PROM2Q8N271 834 aa18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 EAF2Q96CJ1 260 aaPredicted RBP18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 GREM2Q9H772 168 aa18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 CDC45O75419 566 aa18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 RFC4P35249 363 aa18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 LRRC24Q50LG9 513 aa18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
CTNNA1-236ENST00000522792 MYH3P11055 1940 aa18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 TAF7LQ5H9L4 462 aa18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 ATG9AQ7Z3C6 839 aa18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 AOX1Q06278 1338 aa18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 PI4K2BQ8TCG2 481 aa18.95■□□□□ 0.62
CTNNA1-236ENST00000522792 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
CTNNA1-236ENST00000522792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.94■□□□□ 0.62
CTNNA1-236ENST00000522792 EYA2O00167 538 aa18.94■□□□□ 0.62
CTNNA1-236ENST00000522792 ITGA6P23229 1130 aa18.94■□□□□ 0.62
CTNNA1-236ENST00000522792 TUBGCP6Q96RT7 1819 aa18.94■□□□□ 0.62
CTNNA1-236ENST00000522792 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
CTNNA1-236ENST00000522792 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 MAP4K4O95819 1239 aaPredicted RBP18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 ANP32AP39687 249 aaKnown RBP18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 UBR3Q6ZT12 1888 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 RGL2O15211 777 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 IL15P40933 162 aaPredicted RBP18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 ERFEQ4G0M1 354 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 TNNI3KQ59H18 835 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 RILPL2Q969X0 211 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 FPGT-TNNI3KV9GXZ4 949 aa18.93■□□□□ 0.62
CTNNA1-236ENST00000522792 ANKRD18BA2A2Z9 1011 aa18.92■□□□□ 0.62
CTNNA1-236ENST00000522792 SETDB2Q96T68 719 aa18.92■□□□□ 0.62
CTNNA1-236ENST00000522792 ECHDC1Q9NTX5 307 aa18.92■□□□□ 0.62
CTNNA1-236ENST00000522792 TTC41PQ6P2S7 1318 aa18.92■□□□□ 0.62
CTNNA1-236ENST00000522792 PLSCR1O15162 318 aa18.91■□□□□ 0.62
CTNNA1-236ENST00000522792 CIAO1O76071 339 aa18.91■□□□□ 0.62
CTNNA1-236ENST00000522792 GPATCH3Q96I76 525 aa18.91■□□□□ 0.62
CTNNA1-236ENST00000522792 UPF2Q9HAU5 1272 aaKnown RBP18.91■□□□□ 0.62
CTNNA1-236ENST00000522792 LAMB2P55268 1798 aa18.91■□□□□ 0.62
CTNNA1-236ENST00000522792 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
CTNNA1-236ENST00000522792 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
CTNNA1-236ENST00000522792 COL24A1Q17RW2 1714 aa18.89■□□□□ 0.62
CTNNA1-236ENST00000522792 ERC2O15083 957 aa18.89■□□□□ 0.61
CTNNA1-236ENST00000522792 GLRX3O76003 335 aaKnown RBP18.89■□□□□ 0.61
CTNNA1-236ENST00000522792 NBPF5PQ86XG9 351 aaPredicted RBP18.89■□□□□ 0.61
CTNNA1-236ENST00000522792 DBNLQ9UJU6 430 aaKnown RBP18.89■□□□□ 0.61
CTNNA1-236ENST00000522792 SSFA2P28290 1259 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 DBNDD2Q9BQY9 259 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 ABCC12Q96J65 1359 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 HSP90B1P14625 803 aaKnown RBP18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 ZNF827Q17R98 1081 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 CCDC152Q4G0S7 254 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 NEUROD6Q96NK8 337 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 CNNM1Q9NRU3 951 aa18.88■□□□□ 0.61
CTNNA1-236ENST00000522792 CASC1Q6TDU7 716 aa18.87■□□□□ 0.61
CTNNA1-236ENST00000522792 C3orf67Q6ZVT6 689 aa18.87■□□□□ 0.61
CTNNA1-236ENST00000522792 NYXQ9GZU5 481 aa18.87■□□□□ 0.61
CTNNA1-236ENST00000522792 CEP126Q9P2H0 1117 aa18.87■□□□□ 0.61
CTNNA1-236ENST00000522792 FBXO3Q9UK99 471 aa18.87■□□□□ 0.61
CTNNA1-236ENST00000522792 ZNF609O15014 1411 aa18.87■□□□□ 0.61
CTNNA1-236ENST00000522792 TIMM10P62072 90 aa18.86■□□□□ 0.61
CTNNA1-236ENST00000522792 NFIXQ14938 502 aa18.86■□□□□ 0.61
CTNNA1-236ENST00000522792 RIC1Q4ADV7 1423 aa18.86■□□□□ 0.61
CTNNA1-236ENST00000522792 TBC1D32Q96NH3 1257 aa18.86■□□□□ 0.61
CTNNA1-236ENST00000522792 TFCP2L1Q9NZI6 479 aa18.86■□□□□ 0.61
CTNNA1-236ENST00000522792 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
CTNNA1-236ENST00000522792 GYS1P13807 737 aa18.85■□□□□ 0.61
CTNNA1-236ENST00000522792 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
CTNNA1-236ENST00000522792 CNTROBQ8N137 903 aa18.85■□□□□ 0.61
CTNNA1-236ENST00000522792 BOLA2Q9H3K6 86 aa18.85■□□□□ 0.61
CTNNA1-236ENST00000522792 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
CTNNA1-236ENST00000522792 LRP5O75197 1615 aa18.85■□□□□ 0.61
CTNNA1-236ENST00000522792 A0A1B0GUL7 405 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 NPHP1O15259 732 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 TPTE2Q6XPS3 522 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 C22orf23Q9BZE7 217 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
CTNNA1-236ENST00000522792 CARMIL3Q8ND23 1372 aa18.83■□□□□ 0.61
CTNNA1-236ENST00000522792 SLC10A5Q5PT55 438 aa18.83■□□□□ 0.61
CTNNA1-236ENST00000522792 SPEF2Q9C093 1822 aa18.83■□□□□ 0.61
CTNNA1-236ENST00000522792 COL4A1P02462 1669 aa18.83■□□□□ 0.61
CTNNA1-236ENST00000522792 RTL9Q8NET4 1388 aa18.83■□□□□ 0.6
CTNNA1-236ENST00000522792 CHMLP26374 656 aa18.83■□□□□ 0.6
CTNNA1-236ENST00000522792 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
CTNNA1-236ENST00000522792 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
CTNNA1-236ENST00000522792 ATP5JP18859 108 aa18.81■□□□□ 0.6
CTNNA1-236ENST00000522792 SF3B3Q15393 1217 aaKnown RBP18.81■□□□□ 0.6
CTNNA1-236ENST00000522792 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
CTNNA1-236ENST00000522792 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
CTNNA1-236ENST00000522792 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
CTNNA1-236ENST00000522792 ADORA1P30542 326 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms