RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 ABCC12Q96J65 1359 aa17.63■□□□□ 0.41
EXTL3-211ENST00000522698 SERPINB2P05120 415 aa17.62■□□□□ 0.41
EXTL3-211ENST00000522698 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
EXTL3-211ENST00000522698 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
EXTL3-211ENST00000522698 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
EXTL3-211ENST00000522698 PIM2Q9P1W9 311 aa17.62■□□□□ 0.41
EXTL3-211ENST00000522698 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
EXTL3-211ENST00000522698 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
EXTL3-211ENST00000522698 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
EXTL3-211ENST00000522698 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
EXTL3-211ENST00000522698 SUCLG2Q96I99 432 aa17.61■□□□□ 0.41
EXTL3-211ENST00000522698 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
EXTL3-211ENST00000522698 GNAI2P04899 355 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 FSTL1Q12841 308 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 ERFEQ4G0M1 354 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
EXTL3-211ENST00000522698 SLC10A5Q5PT55 438 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 PRR5LQ6MZQ0 368 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
EXTL3-211ENST00000522698 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
EXTL3-211ENST00000522698 SBF1O95248 1867 aa17.59■□□□□ 0.41
EXTL3-211ENST00000522698 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
EXTL3-211ENST00000522698 IRS4O14654 1257 aaPredicted RBP17.59■□□□□ 0.41
EXTL3-211ENST00000522698 RABL6Q3YEC7 729 aaPredicted RBP17.59■□□□□ 0.41
EXTL3-211ENST00000522698 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
EXTL3-211ENST00000522698 ERICH6BQ5W0A0 696 aa17.59■□□□□ 0.41
EXTL3-211ENST00000522698 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
EXTL3-211ENST00000522698 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.41
EXTL3-211ENST00000522698 FOXO4P98177 505 aa17.58■□□□□ 0.4
EXTL3-211ENST00000522698 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
EXTL3-211ENST00000522698 KLRG1Q96E93 195 aa17.58■□□□□ 0.4
EXTL3-211ENST00000522698 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
EXTL3-211ENST00000522698 PDE8AO60658 829 aa17.57■□□□□ 0.4
EXTL3-211ENST00000522698 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
EXTL3-211ENST00000522698 MTX1Q13505 466 aa17.57■□□□□ 0.4
EXTL3-211ENST00000522698 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
EXTL3-211ENST00000522698 TAF1P21675 1872 aa17.56■□□□□ 0.4
EXTL3-211ENST00000522698 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
EXTL3-211ENST00000522698 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
EXTL3-211ENST00000522698 ST5P78524 1137 aa17.56■□□□□ 0.4
EXTL3-211ENST00000522698 RASSF7Q02833 373 aa17.56■□□□□ 0.4
EXTL3-211ENST00000522698 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
EXTL3-211ENST00000522698 CSF1RP07333 972 aa17.55■□□□□ 0.4
EXTL3-211ENST00000522698 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
EXTL3-211ENST00000522698 CTSWP56202 376 aa17.55■□□□□ 0.4
EXTL3-211ENST00000522698 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
EXTL3-211ENST00000522698 JMYQ8N9B5 988 aa17.55■□□□□ 0.4
EXTL3-211ENST00000522698 SPEF2Q9C093 1822 aa17.55■□□□□ 0.4
EXTL3-211ENST00000522698 HTRA3P83110 453 aa17.54■□□□□ 0.4
EXTL3-211ENST00000522698 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
EXTL3-211ENST00000522698 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
EXTL3-211ENST00000522698 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
EXTL3-211ENST00000522698 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
EXTL3-211ENST00000522698 NPHP1O15259 732 aa17.53■□□□□ 0.4
EXTL3-211ENST00000522698 ATP8B2P98198 1209 aa17.53■□□□□ 0.4
EXTL3-211ENST00000522698 SF3B3Q15393 1217 aaKnown RBP17.53■□□□□ 0.4
EXTL3-211ENST00000522698 LMBR1LQ6UX01 489 aa17.53■□□□□ 0.4
EXTL3-211ENST00000522698 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
EXTL3-211ENST00000522698 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
EXTL3-211ENST00000522698 BRIP1Q9BX63 1249 aa17.53■□□□□ 0.4
EXTL3-211ENST00000522698 ZC3H4Q9UPT8 1303 aaKnown RBP17.52■□□□□ 0.4
EXTL3-211ENST00000522698 COL4A1P02462 1669 aa17.52■□□□□ 0.4
EXTL3-211ENST00000522698 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
EXTL3-211ENST00000522698 CRY2Q49AN0 593 aa17.52■□□□□ 0.4
EXTL3-211ENST00000522698 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
EXTL3-211ENST00000522698 CACNA1SQ13698 1873 aa17.52■□□□□ 0.39
EXTL3-211ENST00000522698 POLA2Q14181 598 aa17.51■□□□□ 0.39
EXTL3-211ENST00000522698 SMC1BQ8NDV3 1235 aa17.51■□□□□ 0.39
EXTL3-211ENST00000522698 SSH3Q8TE77 659 aa17.51■□□□□ 0.39
EXTL3-211ENST00000522698 RRAGCQ9HB90 399 aa17.51■□□□□ 0.39
EXTL3-211ENST00000522698 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
EXTL3-211ENST00000522698 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
EXTL3-211ENST00000522698 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
EXTL3-211ENST00000522698 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
EXTL3-211ENST00000522698 GREM2Q9H772 168 aa17.5■□□□□ 0.39
EXTL3-211ENST00000522698 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
EXTL3-211ENST00000522698 PRELPP51888 382 aa17.49■□□□□ 0.39
EXTL3-211ENST00000522698 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
EXTL3-211ENST00000522698 COL13A1Q5TAT6 717 aaPredicted RBP17.49■□□□□ 0.39
EXTL3-211ENST00000522698 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
EXTL3-211ENST00000522698 PCNTO95613 3336 aa17.48■□□□□ 0.39
EXTL3-211ENST00000522698 PDE6BP35913 854 aa17.48■□□□□ 0.39
EXTL3-211ENST00000522698 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
EXTL3-211ENST00000522698 HMMRO75330 724 aa17.47■□□□□ 0.39
EXTL3-211ENST00000522698 ITGA6P23229 1130 aa17.47■□□□□ 0.39
EXTL3-211ENST00000522698 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
EXTL3-211ENST00000522698 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
EXTL3-211ENST00000522698 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
EXTL3-211ENST00000522698 LRRC37AA6NMS7 1700 aa17.47■□□□□ 0.39
EXTL3-211ENST00000522698 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
EXTL3-211ENST00000522698 SRGNP10124 158 aa17.46■□□□□ 0.39
EXTL3-211ENST00000522698 HOXA10P31260 410 aaPredicted RBP17.46■□□□□ 0.39
EXTL3-211ENST00000522698 PTPN12Q05209 780 aaKnown RBP17.46■□□□□ 0.39
EXTL3-211ENST00000522698 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
EXTL3-211ENST00000522698 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
EXTL3-211ENST00000522698 TTLL6Q8N841 843 aa17.46■□□□□ 0.39
EXTL3-211ENST00000522698 COPRSQ9NQ92 184 aa17.46■□□□□ 0.39
EXTL3-211ENST00000522698 PDZRN3Q9UPQ7 1066 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms