RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 TLL2Q9Y6L7 1015 aa20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 THSD7BQ9C0I4 1608 aa20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 YDJCA8MPS7 323 aa20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 AOC2O75106 756 aa20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 SUPT20HQ8NEM7 779 aa20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 GLIS2Q9BZE0 524 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 LAMB2P55268 1798 aa20.03■□□□□ 0.8
TRAPPC9-213ENST00000522504 CHL1O00533 1208 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 GRAPQ13588 217 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 NEUROD2Q15784 382 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 HSP90AB3PQ58FF7 597 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 CIAPIN1Q6FI81 312 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 GRAPLQ8TC17 118 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 TRPM4Q8TD43 1214 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 PGAP2Q9UHJ9 254 aa20.02■□□□□ 0.8
TRAPPC9-213ENST00000522504 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.79
TRAPPC9-213ENST00000522504 DUOX1Q9NRD9 1551 aa20.01■□□□□ 0.79
TRAPPC9-213ENST00000522504 ECE1P42892 770 aa20.01■□□□□ 0.79
TRAPPC9-213ENST00000522504 DDX46Q7L014 1031 aaKnown RBP20.01■□□□□ 0.79
TRAPPC9-213ENST00000522504 SAPCD2Q86UD0 394 aa20.01■□□□□ 0.79
TRAPPC9-213ENST00000522504 ABHD8Q96I13 439 aa20.01■□□□□ 0.79
TRAPPC9-213ENST00000522504 TRIM35Q9UPQ4 493 aa20.01■□□□□ 0.79
TRAPPC9-213ENST00000522504 CELF2O95319 508 aaKnown RBP20■□□□□ 0.79
TRAPPC9-213ENST00000522504 LMOD3Q0VAK6 560 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 RALBP1Q15311 655 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 DLK2Q6UY11 383 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 TSKSQ9UJT2 592 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 TAF1P21675 1872 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 COL4A1P02462 1669 aa20■□□□□ 0.79
TRAPPC9-213ENST00000522504 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
TRAPPC9-213ENST00000522504 CELF1Q92879 486 aaKnown RBP19.98■□□□□ 0.79
TRAPPC9-213ENST00000522504 FAM89AQ96GI7 184 aa19.98■□□□□ 0.79
TRAPPC9-213ENST00000522504 BCL2L13Q9BXK5 485 aa19.98■□□□□ 0.79
TRAPPC9-213ENST00000522504 ZBTB12Q9Y330 459 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC9-213ENST00000522504 LAS1LQ9Y4W2 734 aaKnown RBP19.98■□□□□ 0.79
TRAPPC9-213ENST00000522504 ATP5J2-PTCD1G3V325 749 aa19.97■□□□□ 0.79
TRAPPC9-213ENST00000522504 TNIP1Q15025 636 aa19.97■□□□□ 0.79
TRAPPC9-213ENST00000522504 ISCA1Q9BUE6 129 aa19.97■□□□□ 0.79
TRAPPC9-213ENST00000522504 CNOT7Q9UIV1 285 aaKnown RBP19.97■□□□□ 0.79
TRAPPC9-213ENST00000522504 CDHR2Q9BYE9 1310 aa19.97■□□□□ 0.79
TRAPPC9-213ENST00000522504 MAP2K2P36507 400 aa19.96■□□□□ 0.79
TRAPPC9-213ENST00000522504 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
TRAPPC9-213ENST00000522504 PLBD2Q8NHP8 589 aa19.96■□□□□ 0.79
TRAPPC9-213ENST00000522504 ZC3H15Q8WU90 426 aaKnown RBP19.96■□□□□ 0.79
TRAPPC9-213ENST00000522504 ZNF408Q9H9D4 720 aa19.96■□□□□ 0.79
TRAPPC9-213ENST00000522504 EGFRP00533 1210 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 ANKRD13DQ6ZTN6 518 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 MICALL2Q8IY33 904 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 BEGAINQ9BUH8 593 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 DBNDD1Q9H9R9 158 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 KCNQ5Q9NR82 932 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 POLLQ9UGP5 575 aa19.95■□□□□ 0.78
TRAPPC9-213ENST00000522504 LRRC37AA6NMS7 1700 aa19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 DDX60Q8IY21 1712 aaKnown RBP19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 PSMD14O00487 310 aa19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 SAMD7Q7Z3H4 446 aa19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 USP48Q86UV5 1035 aa19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 ZIC5Q96T25 663 aa19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 NSFL1CQ9UNZ2 370 aaKnown RBP19.94■□□□□ 0.78
TRAPPC9-213ENST00000522504 RIMBP2O15034 1052 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 GPSM2P81274 684 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 WASHC4Q2M389 1173 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 CDC37L1Q7L3B6 337 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 TMC4Q7Z404 712 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 RUNDC1Q96C34 613 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 HHIPL1Q96JK4 782 aa19.93■□□□□ 0.78
TRAPPC9-213ENST00000522504 DBF4Q9UBU7 674 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC9-213ENST00000522504 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
TRAPPC9-213ENST00000522504 MYBBP1AQ9BQG0 1328 aaKnown RBP19.92■□□□□ 0.78
TRAPPC9-213ENST00000522504 RTL9Q8NET4 1388 aa19.92■□□□□ 0.78
TRAPPC9-213ENST00000522504 H7C1D1 291 aa19.91■□□□□ 0.78
TRAPPC9-213ENST00000522504 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
TRAPPC9-213ENST00000522504 DOK7Q18PE1 504 aa19.91■□□□□ 0.78
TRAPPC9-213ENST00000522504 TBC1D10BQ4KMP7 808 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC9-213ENST00000522504 DUSP27Q5VZP5 1158 aa19.91■□□□□ 0.78
TRAPPC9-213ENST00000522504 DPF2Q92785 391 aa19.91■□□□□ 0.78
TRAPPC9-213ENST00000522504 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
TRAPPC9-213ENST00000522504 HOXB7P09629 217 aa19.9■□□□□ 0.78
TRAPPC9-213ENST00000522504 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
TRAPPC9-213ENST00000522504 CCDC85CA6NKD9 419 aa19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 IRS4O14654 1257 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 BRPF1P55201 1214 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 TRIM28Q13263 835 aaKnown RBP19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 TBC1D16Q8TBP0 767 aa19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 CFAP44Q96MT7 982 aa19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 MBIPQ9NS73 344 aa19.89■□□□□ 0.77
TRAPPC9-213ENST00000522504 ECE2O60344 883 aa19.88■□□□□ 0.77
TRAPPC9-213ENST00000522504 SEC31BQ9NQW1 1179 aa19.88■□□□□ 0.77
TRAPPC9-213ENST00000522504 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
TRAPPC9-213ENST00000522504 ADM5C9JUS6 153 aa19.87■□□□□ 0.77
TRAPPC9-213ENST00000522504 HUNKP57058 714 aa19.87■□□□□ 0.77
TRAPPC9-213ENST00000522504 RPS8P62241 208 aaKnown RBP19.87■□□□□ 0.77
TRAPPC9-213ENST00000522504 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
TRAPPC9-213ENST00000522504 RBM26Q5T8P6 1007 aaKnown RBP19.87■□□□□ 0.77
TRAPPC9-213ENST00000522504 KRT26Q7Z3Y9 468 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms