RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
CD74-208ENST00000522246 ST5P78524 1137 aa13.1□□□□□ -0.31
CD74-208ENST00000522246 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
CD74-208ENST00000522246 SF3B3Q15393 1217 aaKnown RBP13.1□□□□□ -0.31
CD74-208ENST00000522246 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
CD74-208ENST00000522246 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
CD74-208ENST00000522246 SYNE4Q8N205 404 aa13.1□□□□□ -0.31
CD74-208ENST00000522246 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
CD74-208ENST00000522246 RTL9Q8NET4 1388 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 CIAO1O76071 339 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 IL15P40933 162 aaPredicted RBP13.09□□□□□ -0.31
CD74-208ENST00000522246 QSER1Q2KHR3 1735 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 MYH3P11055 1940 aa13.09□□□□□ -0.31
CD74-208ENST00000522246 EYA2O00167 538 aa13.08□□□□□ -0.32
CD74-208ENST00000522246 ITGA6P23229 1130 aa13.08□□□□□ -0.32
CD74-208ENST00000522246 CLASRPQ8N2M8 674 aaKnown RBP13.08□□□□□ -0.32
CD74-208ENST00000522246 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
CD74-208ENST00000522246 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
CD74-208ENST00000522246 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
CD74-208ENST00000522246 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
CD74-208ENST00000522246 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
CD74-208ENST00000522246 GREM2Q9H772 168 aa13.07□□□□□ -0.32
CD74-208ENST00000522246 PA2G4Q9UQ80 394 aaKnown RBP13.07□□□□□ -0.32
CD74-208ENST00000522246 COL24A1Q17RW2 1714 aa13.07□□□□□ -0.32
CD74-208ENST00000522246 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 APBB1O00213 710 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
CD74-208ENST00000522246 RGS3P49796 1198 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 GPR108Q9NPR9 543 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
CD74-208ENST00000522246 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
CD74-208ENST00000522246 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
CD74-208ENST00000522246 DDX46Q7L014 1031 aaKnown RBP13.05□□□□□ -0.32
CD74-208ENST00000522246 MPHOSPH8Q99549 860 aa13.05□□□□□ -0.32
CD74-208ENST00000522246 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
CD74-208ENST00000522246 SIL1Q9H173 461 aa13.05□□□□□ -0.32
CD74-208ENST00000522246 AKAP2Q9Y2D5 859 aa13.05□□□□□ -0.32
CD74-208ENST00000522246 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
CD74-208ENST00000522246 SASH1O94885 1247 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 MMP10P09238 476 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
CD74-208ENST00000522246 DDR1Q08345 913 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 CCDC85AQ96PX6 553 aaPredicted RBP13.04□□□□□ -0.32
CD74-208ENST00000522246 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 LAMB2P55268 1798 aa13.04□□□□□ -0.32
CD74-208ENST00000522246 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
CD74-208ENST00000522246 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
CD74-208ENST00000522246 PDE4AP27815 886 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 PDE6BP35913 854 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
CD74-208ENST00000522246 ZNF594Q96JF6 807 aaPredicted RBP13.03□□□□□ -0.32
CD74-208ENST00000522246 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 RIPOR2Q9Y4F9 1068 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
CD74-208ENST00000522246 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.33
CD74-208ENST00000522246 TFCP2Q12800 502 aa13.02□□□□□ -0.33
CD74-208ENST00000522246 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.33
CD74-208ENST00000522246 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
CD74-208ENST00000522246 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
CD74-208ENST00000522246 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
CD74-208ENST00000522246 AOX1Q06278 1338 aa13.02□□□□□ -0.33
CD74-208ENST00000522246 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
CD74-208ENST00000522246 ERC2O15083 957 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 BBOX1O75936 387 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 MX1P20591 662 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
CD74-208ENST00000522246 PDE1AP54750 535 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 METTL24Q5JXM2 366 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 AACSQ86V21 672 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 SEC31BQ9NQW1 1179 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
CD74-208ENST00000522246 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
CD74-208ENST00000522246 ALDH1B1P30837 517 aa13□□□□□ -0.33
CD74-208ENST00000522246 GRAPQ13588 217 aa13□□□□□ -0.33
CD74-208ENST00000522246 TNNI3KQ59H18 835 aa13□□□□□ -0.33
CD74-208ENST00000522246 BMP2KLQ5H9B9 411 aa13□□□□□ -0.33
CD74-208ENST00000522246 MSL1Q68DK7 614 aa13□□□□□ -0.33
CD74-208ENST00000522246 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
CD74-208ENST00000522246 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
CD74-208ENST00000522246 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
CD74-208ENST00000522246 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
CD74-208ENST00000522246 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
CD74-208ENST00000522246 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
CD74-208ENST00000522246 PDE8BO95263 885 aa12.99□□□□□ -0.33
CD74-208ENST00000522246 EAF2Q96CJ1 260 aaPredicted RBP12.99□□□□□ -0.33
CD74-208ENST00000522246 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms