RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 RGPD3A6NKT7 1758 aaPredicted RBP10.85□□□□□ -0.67
VPS13B-210ENST00000521932 RGPD4Q7Z3J3 1758 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 PAPPAQ13219 1627 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 TLL1O43897 1013 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
VPS13B-210ENST00000521932 HNRNPUQ00839 825 aaKnown RBP eCLIP10.85□□□□□ -0.67
VPS13B-210ENST00000521932 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
VPS13B-210ENST00000521932 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
VPS13B-210ENST00000521932 LY75O60449 1722 aa10.84□□□□□ -0.67
VPS13B-210ENST00000521932 IRF6O14896 467 aa10.84□□□□□ -0.67
VPS13B-210ENST00000521932 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
VPS13B-210ENST00000521932 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
VPS13B-210ENST00000521932 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
VPS13B-210ENST00000521932 ZNF831Q5JPB2 1677 aa10.84□□□□□ -0.67
VPS13B-210ENST00000521932 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
VPS13B-210ENST00000521932 GIGYF1O75420 1035 aaPredicted RBP10.83□□□□□ -0.68
VPS13B-210ENST00000521932 SNRPA1P09661 255 aaKnown RBP10.83□□□□□ -0.68
VPS13B-210ENST00000521932 SLFN5Q08AF3 891 aa10.83□□□□□ -0.68
VPS13B-210ENST00000521932 KMT5BQ4FZB7 885 aa10.83□□□□□ -0.68
VPS13B-210ENST00000521932 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
VPS13B-210ENST00000521932 TEX13AQ9BXU3 409 aaPredicted RBP10.83□□□□□ -0.68
VPS13B-210ENST00000521932 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
VPS13B-210ENST00000521932 KDM3BQ7LBC6 1761 aa10.82□□□□□ -0.68
VPS13B-210ENST00000521932 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
VPS13B-210ENST00000521932 E9PSI1 815 aa10.82□□□□□ -0.68
VPS13B-210ENST00000521932 KCNQ4P56696 695 aa10.82□□□□□ -0.68
VPS13B-210ENST00000521932 ITPK1Q13572 414 aa10.82□□□□□ -0.68
VPS13B-210ENST00000521932 MYH16Q9H6N6 1097 aa10.82□□□□□ -0.68
VPS13B-210ENST00000521932 RC3H1Q5TC82 1133 aaKnown RBP10.81□□□□□ -0.68
VPS13B-210ENST00000521932 TSR2Q969E8 191 aaKnown RBP10.81□□□□□ -0.68
VPS13B-210ENST00000521932 CCDC102AQ96A19 550 aa10.81□□□□□ -0.68
VPS13B-210ENST00000521932 USP16Q9Y5T5 823 aa10.81□□□□□ -0.68
VPS13B-210ENST00000521932 FANCIQ9NVI1 1328 aa10.81□□□□□ -0.68
VPS13B-210ENST00000521932 CICQ96RK0 1608 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-210ENST00000521932 RREB1Q92766 1687 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 STARD3NLO95772 234 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 HOXB7P09629 217 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 CYP19A1P11511 503 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-210ENST00000521932 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
VPS13B-210ENST00000521932 DNAJC10Q8IXB1 793 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 LINC00116Q8NCU8 138 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
VPS13B-210ENST00000521932 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-210ENST00000521932 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
VPS13B-210ENST00000521932 DUSP27Q5VZP5 1158 aa10.79□□□□□ -0.68
VPS13B-210ENST00000521932 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
VPS13B-210ENST00000521932 RDH13Q8NBN7 331 aa10.79□□□□□ -0.68
VPS13B-210ENST00000521932 IRX2Q9BZI1 471 aaPredicted RBP10.79□□□□□ -0.68
VPS13B-210ENST00000521932 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
VPS13B-210ENST00000521932 ZMYND10O75800 440 aa10.78□□□□□ -0.68
VPS13B-210ENST00000521932 CRKLP46109 303 aaKnown RBP10.78□□□□□ -0.68
VPS13B-210ENST00000521932 SLC15A2Q16348 729 aa10.78□□□□□ -0.68
VPS13B-210ENST00000521932 NBPF14Q5TI25 921 aa10.78□□□□□ -0.68
VPS13B-210ENST00000521932 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
VPS13B-210ENST00000521932 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
VPS13B-210ENST00000521932 CHMP4AQ9BY43 222 aa10.78□□□□□ -0.68
VPS13B-210ENST00000521932 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
VPS13B-210ENST00000521932 TAF1LQ8IZX4 1826 aa10.77□□□□□ -0.68
VPS13B-210ENST00000521932 C5P01031 1676 aa10.77□□□□□ -0.69
VPS13B-210ENST00000521932 VAMP4O75379 141 aa10.77□□□□□ -0.69
VPS13B-210ENST00000521932 RPS6KA4O75676 772 aa10.77□□□□□ -0.69
VPS13B-210ENST00000521932 BRPF1P55201 1214 aaPredicted RBP10.77□□□□□ -0.69
VPS13B-210ENST00000521932 EXOSC9Q06265 439 aaKnown RBP10.77□□□□□ -0.69
VPS13B-210ENST00000521932 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
VPS13B-210ENST00000521932 TJP1Q07157 1748 aa10.77□□□□□ -0.69
VPS13B-210ENST00000521932 NUP188Q5SRE5 1749 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 ELL2O00472 640 aaPredicted RBP10.76□□□□□ -0.69
VPS13B-210ENST00000521932 A1BGP04217 495 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 GCGRP47871 477 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
VPS13B-210ENST00000521932 FUT2Q10981 343 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 ZNF827Q17R98 1081 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 TWISTNBQ3B726 338 aaPredicted RBP10.76□□□□□ -0.69
VPS13B-210ENST00000521932 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 STK32BQ9NY57 414 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 ERBB4Q15303 1308 aa10.76□□□□□ -0.69
VPS13B-210ENST00000521932 C4BP0C0L5 1744 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 CT47B1P0C2W7 299 aaPredicted RBP10.75□□□□□ -0.69
VPS13B-210ENST00000521932 EIF2S2P20042 333 aaKnown RBP10.75□□□□□ -0.69
VPS13B-210ENST00000521932 SSFA2P28290 1259 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 IL6STP40189 918 aaPredicted RBP10.75□□□□□ -0.69
VPS13B-210ENST00000521932 EIF5P55010 431 aaKnown RBP10.75□□□□□ -0.69
VPS13B-210ENST00000521932 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 FLAD1Q8NFF5 587 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 AK7Q96M32 723 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 TFCP2L1Q9NZI6 479 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 ZBTB1Q9Y2K1 713 aa10.75□□□□□ -0.69
VPS13B-210ENST00000521932 RTCBQ9Y3I0 505 aaKnown RBP10.75□□□□□ -0.69
VPS13B-210ENST00000521932 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
VPS13B-210ENST00000521932 CCDC30Q5VVM6 783 aa10.74□□□□□ -0.69
VPS13B-210ENST00000521932 NBPF10Q6P3W6 841 aaKnown RBP10.74□□□□□ -0.69
VPS13B-210ENST00000521932 LRP10Q7Z4F1 713 aa10.74□□□□□ -0.69
VPS13B-210ENST00000521932 AMIGO3Q86WK7 504 aa10.74□□□□□ -0.69
VPS13B-210ENST00000521932 SULF1Q8IWU6 871 aa10.74□□□□□ -0.69
VPS13B-210ENST00000521932 NBPF15Q8N660 670 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms