RNA–Protein interactions for RNA: ENST00000521693.1

LAMA4-217, Transcript of laminin subunit alpha 4, humanhuman

TSL 2

Gene LAMA4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-217ENST00000521693 GRIK5Q16478 980 aa8.18□□□□□ -1.1
LAMA4-217ENST00000521693 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
LAMA4-217ENST00000521693 C11orf16Q9NQ32 467 aa8.18□□□□□ -1.1
LAMA4-217ENST00000521693 ZFATQ9P243 1243 aa8.18□□□□□ -1.1
LAMA4-217ENST00000521693 ZBTB42B2RXF5 422 aa8.17□□□□□ -1.1
LAMA4-217ENST00000521693 RARAP10276 462 aa8.17□□□□□ -1.1
LAMA4-217ENST00000521693 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
LAMA4-217ENST00000521693 ARID4AP29374 1257 aaPredicted RBP8.17□□□□□ -1.1
LAMA4-217ENST00000521693 GPLD1P80108 840 aa8.17□□□□□ -1.1
LAMA4-217ENST00000521693 MLLT1Q03111 559 aaPredicted RBP8.17□□□□□ -1.1
LAMA4-217ENST00000521693 PTK7Q13308 1070 aa8.17□□□□□ -1.1
LAMA4-217ENST00000521693 CRTC2Q53ET0 693 aaPredicted RBP8.17□□□□□ -1.1
LAMA4-217ENST00000521693 IGF2-ASQ6U949 168 aa8.17□□□□□ -1.1
LAMA4-217ENST00000521693 TTC9Q92623 222 aa8.17□□□□□ -1.1
LAMA4-217ENST00000521693 SASH3O75995 380 aa8.16□□□□□ -1.1
LAMA4-217ENST00000521693 NOS3P29474 1203 aa8.16□□□□□ -1.1
LAMA4-217ENST00000521693 DGKZQ13574 1117 aa8.16□□□□□ -1.1
LAMA4-217ENST00000521693 IFT43Q96FT9 208 aa8.16□□□□□ -1.1
LAMA4-217ENST00000521693 PLAURQ03405 335 aa8.15□□□□□ -1.1
LAMA4-217ENST00000521693 ANKMY2Q8IV38 441 aa8.15□□□□□ -1.1
LAMA4-217ENST00000521693 MICAL2O94851 1124 aa8.14□□□□□ -1.11
LAMA4-217ENST00000521693 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
LAMA4-217ENST00000521693 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
LAMA4-217ENST00000521693 RNF112Q9ULX5 631 aa8.14□□□□□ -1.11
LAMA4-217ENST00000521693 FAM196BA6NMK8 535 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L13C9JLJ4 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L11C9JVI0 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L21D6R901 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L18D6R9N7 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L22D6RA61 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L17D6RBQ6 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L19D6RCP7 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L20D6RJB6 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 USP17L24Q0WX57 530 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 KANK4Q5T7N3 995 aaPredicted RBP8.13□□□□□ -1.11
LAMA4-217ENST00000521693 HFE2Q6ZVN8 426 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 PROSER2Q86WR7 435 aaPredicted RBP8.13□□□□□ -1.11
LAMA4-217ENST00000521693 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 MEGF10Q96KG7 1140 aa8.13□□□□□ -1.11
LAMA4-217ENST00000521693 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
LAMA4-217ENST00000521693 FOXO3O43524 673 aa8.12□□□□□ -1.11
LAMA4-217ENST00000521693 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
LAMA4-217ENST00000521693 EIF2AK2P19525 551 aaKnown RBP8.12□□□□□ -1.11
LAMA4-217ENST00000521693 NRLP54845 237 aa8.12□□□□□ -1.11
LAMA4-217ENST00000521693 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
LAMA4-217ENST00000521693 KRTAP1-3Q8IUG1 177 aa8.12□□□□□ -1.11
LAMA4-217ENST00000521693 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
LAMA4-217ENST00000521693 PPP1R12CQ9BZL4 782 aa8.12□□□□□ -1.11
LAMA4-217ENST00000521693 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
LAMA4-217ENST00000521693 FNBP4Q8N3X1 1017 aaPredicted RBP8.11□□□□□ -1.11
LAMA4-217ENST00000521693 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
LAMA4-217ENST00000521693 RTCBQ9Y3I0 505 aaKnown RBP8.11□□□□□ -1.11
LAMA4-217ENST00000521693 DLL1O00548 723 aa8.1□□□□□ -1.11
LAMA4-217ENST00000521693 MYO19Q96H55 970 aa8.1□□□□□ -1.11
LAMA4-217ENST00000521693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.11
LAMA4-217ENST00000521693 TLR7Q9NYK1 1049 aaKnown RBP8.1□□□□□ -1.11
LAMA4-217ENST00000521693 XYLBO75191 536 aa8.09□□□□□ -1.11
LAMA4-217ENST00000521693 EGFRP00533 1210 aa8.09□□□□□ -1.11
LAMA4-217ENST00000521693 LMOD1P29536 600 aaPredicted RBP8.09□□□□□ -1.11
LAMA4-217ENST00000521693 WEE1P30291 646 aa8.09□□□□□ -1.11
LAMA4-217ENST00000521693 PLD4Q96BZ4 506 aa8.09□□□□□ -1.11
LAMA4-217ENST00000521693 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
LAMA4-217ENST00000521693 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
LAMA4-217ENST00000521693 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
LAMA4-217ENST00000521693 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 OPLAHO14841 1288 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 GHRHP01286 108 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 PSAPP07602 524 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 SIK1P57059 783 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 LCE3BQ5TA77 95 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 GDF6Q6KF10 455 aaPredicted RBP8.08□□□□□ -1.12
LAMA4-217ENST00000521693 SLC51AQ86UW1 340 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
LAMA4-217ENST00000521693 RGL4Q8IZJ4 473 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 CMTR1Q8N1G2 835 aaKnown RBP8.08□□□□□ -1.12
LAMA4-217ENST00000521693 DCAF11Q8TEB1 546 aa8.08□□□□□ -1.12
LAMA4-217ENST00000521693 J3QW42 95 aa8.07□□□□□ -1.12
LAMA4-217ENST00000521693 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
LAMA4-217ENST00000521693 ARXQ96QS3 562 aa8.07□□□□□ -1.12
LAMA4-217ENST00000521693 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
LAMA4-217ENST00000521693 SRA1Q9HD15 236 aaKnown RBP8.07□□□□□ -1.12
LAMA4-217ENST00000521693 PCMTD2Q9NV79 361 aa8.07□□□□□ -1.12
LAMA4-217ENST00000521693 ALX3O95076 343 aa8.06□□□□□ -1.12
LAMA4-217ENST00000521693 FSTP19883 344 aa8.06□□□□□ -1.12
LAMA4-217ENST00000521693 TREML1Q86YW5 311 aa8.06□□□□□ -1.12
LAMA4-217ENST00000521693 IL22RA1Q8N6P7 574 aa8.06□□□□□ -1.12
LAMA4-217ENST00000521693 NSUN5Q96P11 429 aaKnown RBP8.06□□□□□ -1.12
LAMA4-217ENST00000521693 LRFN2Q9ULH4 789 aa8.06□□□□□ -1.12
LAMA4-217ENST00000521693 F8W735 103 aaPredicted RBP8.05□□□□□ -1.12
LAMA4-217ENST00000521693 MMP20O60882 483 aa8.05□□□□□ -1.12
LAMA4-217ENST00000521693 MAP4K3Q8IVH8 894 aa8.05□□□□□ -1.12
LAMA4-217ENST00000521693 SOX18P35713 384 aa8.04□□□□□ -1.12
LAMA4-217ENST00000521693 FAM200AQ8TCP9 573 aa8.04□□□□□ -1.12
LAMA4-217ENST00000521693 KCNMB2Q9Y691 235 aa8.03□□□□□ -1.12
LAMA4-217ENST00000521693 PTCD1O75127 700 aaKnown RBP8.02□□□□□ -1.13
LAMA4-217ENST00000521693 HOXD8P13378 290 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms