RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CSF1RP07333 972 aa22.38■■□□□ 1.17
TRAPPC9-210ENST00000521667 ITPK1Q13572 414 aa22.38■■□□□ 1.17
TRAPPC9-210ENST00000521667 CIZ1Q9ULV3 898 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC9-210ENST00000521667 LRRC24Q50LG9 513 aa22.37■■□□□ 1.17
TRAPPC9-210ENST00000521667 PTF1AQ7RTS3 328 aa22.37■■□□□ 1.17
TRAPPC9-210ENST00000521667 FBXO3Q9UK99 471 aa22.36■■□□□ 1.17
TRAPPC9-210ENST00000521667 ANKRD36CQ5JPF3 1778 aa22.36■■□□□ 1.17
TRAPPC9-210ENST00000521667 FSD1Q9BTV5 496 aa22.36■■□□□ 1.17
TRAPPC9-210ENST00000521667 NEK4P51957 841 aa22.35■■□□□ 1.17
TRAPPC9-210ENST00000521667 ZNF34Q8IZ26 560 aa22.35■■□□□ 1.17
TRAPPC9-210ENST00000521667 RREB1Q92766 1687 aa22.35■■□□□ 1.17
TRAPPC9-210ENST00000521667 SEPT12Q8IYM1 358 aa22.35■■□□□ 1.17
TRAPPC9-210ENST00000521667 PUS3Q9BZE2 481 aaKnown RBP22.35■■□□□ 1.17
TRAPPC9-210ENST00000521667 TRMT112Q9UI30 125 aaKnown RBP22.35■■□□□ 1.17
TRAPPC9-210ENST00000521667 IFIT5Q13325 482 aaKnown RBP22.34■■□□□ 1.17
TRAPPC9-210ENST00000521667 SYNE4Q8N205 404 aa22.34■■□□□ 1.17
TRAPPC9-210ENST00000521667 FOXD4L1Q9NU39 408 aa22.34■■□□□ 1.17
TRAPPC9-210ENST00000521667 NEUROD6Q96NK8 337 aa22.33■■□□□ 1.17
TRAPPC9-210ENST00000521667 UBN2Q6ZU65 1347 aa22.33■■□□□ 1.17
TRAPPC9-210ENST00000521667 ZNF609O15014 1411 aa22.33■■□□□ 1.17
TRAPPC9-210ENST00000521667 IRS4O14654 1257 aaPredicted RBP22.33■■□□□ 1.16
TRAPPC9-210ENST00000521667 ONECUT3O60422 494 aaPredicted RBP22.33■■□□□ 1.16
TRAPPC9-210ENST00000521667 NMIQ13287 307 aaPredicted RBP22.33■■□□□ 1.16
TRAPPC9-210ENST00000521667 IL27Q8NEV9 243 aa22.33■■□□□ 1.16
TRAPPC9-210ENST00000521667 CCDC85AQ96PX6 553 aaPredicted RBP22.33■■□□□ 1.16
TRAPPC9-210ENST00000521667 HAUS7Q99871 368 aa22.33■■□□□ 1.16
TRAPPC9-210ENST00000521667 MCM2P49736 904 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 TAF7LQ5H9L4 462 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 TTLL11Q8NHH1 800 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 FAM227BQ96M60 508 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 SNRKQ9NRH2 765 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 CEP126Q9P2H0 1117 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 NUP98P52948 1817 aa22.32■■□□□ 1.16
TRAPPC9-210ENST00000521667 CTSWP56202 376 aa22.31■■□□□ 1.16
TRAPPC9-210ENST00000521667 TIMM10P62072 90 aa22.31■■□□□ 1.16
TRAPPC9-210ENST00000521667 EDC3Q96F86 508 aaKnown RBP22.31■■□□□ 1.16
TRAPPC9-210ENST00000521667 RFX7Q2KHR2 1363 aa22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 SNX14Q9Y5W7 946 aa22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 A0A1B0GUL7 405 aa22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 PDE8AO60658 829 aa22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 CAMTA2O94983 1202 aa22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 PTH1RQ03431 593 aa22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
TRAPPC9-210ENST00000521667 CCDC171Q6TFL3 1326 aa22.29■■□□□ 1.16
TRAPPC9-210ENST00000521667 A0A0D9SFI3 127 aa22.29■■□□□ 1.16
TRAPPC9-210ENST00000521667 GREM2Q9H772 168 aa22.29■■□□□ 1.16
TRAPPC9-210ENST00000521667 ZNF831Q5JPB2 1677 aa22.29■■□□□ 1.16
TRAPPC9-210ENST00000521667 ITGA6P23229 1130 aa22.28■■□□□ 1.16
TRAPPC9-210ENST00000521667 AKAP2Q9Y2D5 859 aa22.28■■□□□ 1.16
TRAPPC9-210ENST00000521667 ANKRD18BA2A2Z9 1011 aa22.28■■□□□ 1.16
TRAPPC9-210ENST00000521667 AK7Q96M32 723 aa22.28■■□□□ 1.16
TRAPPC9-210ENST00000521667 UPF3BQ9BZI7 483 aaKnown RBP22.28■■□□□ 1.16
TRAPPC9-210ENST00000521667 MED23Q9ULK4 1368 aa22.27■■□□□ 1.16
TRAPPC9-210ENST00000521667 KCNQ4P56696 695 aa22.27■■□□□ 1.16
TRAPPC9-210ENST00000521667 RAB3GAP1Q15042 981 aa22.27■■□□□ 1.16
TRAPPC9-210ENST00000521667 RASEFQ8IZ41 740 aa22.27■■□□□ 1.16
TRAPPC9-210ENST00000521667 NDUFB9Q9Y6M9 179 aa22.27■■□□□ 1.16
TRAPPC9-210ENST00000521667 BTAF1O14981 1849 aa22.27■■□□□ 1.16
TRAPPC9-210ENST00000521667 EP400Q96L91 3159 aa22.27■■□□□ 1.15
TRAPPC9-210ENST00000521667 PARP10Q53GL7 1025 aa22.26■■□□□ 1.15
TRAPPC9-210ENST00000521667 SUSD4Q5VX71 490 aa22.26■■□□□ 1.15
TRAPPC9-210ENST00000521667 NHSQ6T4R5 1651 aa22.26■■□□□ 1.15
TRAPPC9-210ENST00000521667 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
TRAPPC9-210ENST00000521667 COL5A3P25940 1745 aaPredicted RBP22.26■■□□□ 1.15
TRAPPC9-210ENST00000521667 KCNB2Q92953 911 aa22.26■■□□□ 1.15
TRAPPC9-210ENST00000521667 MCM4P33991 863 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 LDHAL6AQ6ZMR3 332 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 DDX46Q7L014 1031 aaKnown RBP22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 LINC00116Q8NCU8 138 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 MAP4K1Q92918 833 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 TMX3Q96JJ7 454 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 UTP14AQ9BVJ6 771 aaKnown RBP22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 CWC22Q9HCG8 908 aaKnown RBP22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 RIPOR2Q9Y4F9 1068 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 BRWD3Q6RI45 1802 aa22.25■■□□□ 1.15
TRAPPC9-210ENST00000521667 NECTIN1Q15223 517 aa22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 PRPF40BQ6NWY9 871 aaKnown RBP22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 PAG1Q9NWQ8 432 aa22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 MYH14Q7Z406 1995 aaKnown RBP22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 RIC1Q4ADV7 1423 aa22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 SBF2Q86WG5 1849 aa22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 TNPO1Q92973 898 aaKnown RBP22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 RBM8AQ9Y5S9 174 aaKnown RBP22.24■■□□□ 1.15
TRAPPC9-210ENST00000521667 IFIT1P09914 478 aaKnown RBP22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 TICAM2Q86XR7 235 aa22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 DEKP35659 375 aaKnown RBP22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 METTL24Q5JXM2 366 aa22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 CCDC158Q5M9N0 1113 aa22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 NIP7Q9Y221 180 aaKnown RBP eCLIP22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 ZNF652Q9Y2D9 606 aa22.23■■□□□ 1.15
TRAPPC9-210ENST00000521667 CNTNAP4Q9C0A0 1308 aa22.22■■□□□ 1.15
TRAPPC9-210ENST00000521667 GOLIM4O00461 696 aa22.22■■□□□ 1.15
TRAPPC9-210ENST00000521667 KCNJ4P48050 445 aa22.22■■□□□ 1.15
TRAPPC9-210ENST00000521667 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
TRAPPC9-210ENST00000521667 XAGE2Q96GT9 111 aa22.22■■□□□ 1.15
TRAPPC9-210ENST00000521667 CNNM1Q9NRU3 951 aa22.22■■□□□ 1.15
TRAPPC9-210ENST00000521667 ZKSCAN1P17029 563 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC9-210ENST00000521667 CUL4AQ13619 759 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms