RNA–Protein interactions for RNA: ENST00000521431.1

PSEN2-209, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-209ENST00000521431 KIAA2012Q0VF49 1180 aa25.3■■□□□ 1.64
PSEN2-209ENST00000521431 TNIP1Q15025 636 aa25.3■■□□□ 1.64
PSEN2-209ENST00000521431 BCL2L13Q9BXK5 485 aa25.3■■□□□ 1.64
PSEN2-209ENST00000521431 ANKRD36CQ5JPF3 1778 aa25.3■■□□□ 1.64
PSEN2-209ENST00000521431 HCLS1P14317 486 aaPredicted RBP25.29■■□□□ 1.64
PSEN2-209ENST00000521431 MAP2K2P36507 400 aa25.29■■□□□ 1.64
PSEN2-209ENST00000521431 GRAPQ13588 217 aa25.29■■□□□ 1.64
PSEN2-209ENST00000521431 GRAPLQ8TC17 118 aaPredicted RBP25.29■■□□□ 1.64
PSEN2-209ENST00000521431 XAGE3Q8WTP9 111 aa25.29■■□□□ 1.64
PSEN2-209ENST00000521431 TRMT112Q9UI30 125 aaKnown RBP25.29■■□□□ 1.64
PSEN2-209ENST00000521431 SH3TC1Q8TE82 1336 aa25.29■■□□□ 1.64
PSEN2-209ENST00000521431 CELF2O95319 508 aaKnown RBP25.28■■□□□ 1.64
PSEN2-209ENST00000521431 TCIRG1Q13488 830 aa25.28■■□□□ 1.64
PSEN2-209ENST00000521431 TMC4Q7Z404 712 aa25.28■■□□□ 1.64
PSEN2-209ENST00000521431 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
PSEN2-209ENST00000521431 RAD17O75943 681 aa25.27■■□□□ 1.64
PSEN2-209ENST00000521431 TMPOP42166 694 aaKnown RBP25.27■■□□□ 1.64
PSEN2-209ENST00000521431 ZC3H15Q8WU90 426 aaKnown RBP25.27■■□□□ 1.64
PSEN2-209ENST00000521431 LAMB2P55268 1798 aa25.26■■□□□ 1.63
PSEN2-209ENST00000521431 SAPCD2Q86UD0 394 aa25.26■■□□□ 1.63
PSEN2-209ENST00000521431 HHIPL1Q96JK4 782 aa25.26■■□□□ 1.63
PSEN2-209ENST00000521431 GLIS2Q9BZE0 524 aaPredicted RBP25.26■■□□□ 1.63
PSEN2-209ENST00000521431 PGAP2Q9UHJ9 254 aa25.26■■□□□ 1.63
PSEN2-209ENST00000521431 CA12O43570 354 aa25.24■■□□□ 1.63
PSEN2-209ENST00000521431 AOC2O75106 756 aa25.24■■□□□ 1.63
PSEN2-209ENST00000521431 RALBP1Q15311 655 aa25.24■■□□□ 1.63
PSEN2-209ENST00000521431 CDC37L1Q7L3B6 337 aa25.23■■□□□ 1.63
PSEN2-209ENST00000521431 ZNF408Q9H9D4 720 aa25.23■■□□□ 1.63
PSEN2-209ENST00000521431 H7C1D1 291 aa25.22■■□□□ 1.63
PSEN2-209ENST00000521431 CNOT7Q9UIV1 285 aaKnown RBP25.22■■□□□ 1.63
PSEN2-209ENST00000521431 HIRAP54198 1017 aaPredicted RBP25.2■■□□□ 1.62
PSEN2-209ENST00000521431 TRPM4Q8TD43 1214 aa25.2■■□□□ 1.62
PSEN2-209ENST00000521431 YDJCA8MPS7 323 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 CHL1O00533 1208 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 BRPF1P55201 1214 aaPredicted RBP25.19■■□□□ 1.62
PSEN2-209ENST00000521431 NEUROD2Q15784 382 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 WASHC4Q2M389 1173 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 PLBD2Q8NHP8 589 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 CHPF2Q9P2E5 772 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 TSKSQ9UJT2 592 aa25.19■■□□□ 1.62
PSEN2-209ENST00000521431 LAS1LQ9Y4W2 734 aaKnown RBP25.19■■□□□ 1.62
PSEN2-209ENST00000521431 DUOX1Q9NRD9 1551 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 LRRC37AA6NMS7 1700 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 CCDC85CA6NKD9 419 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 FAM161AQ3B820 660 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 HDGFL1Q5TGJ6 251 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 MICALL2Q8IY33 904 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 DPF2Q92785 391 aa25.18■■□□□ 1.62
PSEN2-209ENST00000521431 HOXB7P09629 217 aa25.17■■□□□ 1.62
PSEN2-209ENST00000521431 KRT24Q2M2I5 525 aa25.17■■□□□ 1.62
PSEN2-209ENST00000521431 ANKRD13DQ6ZTN6 518 aa25.17■■□□□ 1.62
PSEN2-209ENST00000521431 NSFL1CQ9UNZ2 370 aaKnown RBP25.17■■□□□ 1.62
PSEN2-209ENST00000521431 SF3B3Q15393 1217 aaKnown RBP25.16■■□□□ 1.62
PSEN2-209ENST00000521431 DBF4Q9UBU7 674 aaPredicted RBP25.16■■□□□ 1.62
PSEN2-209ENST00000521431 NOGQ13253 232 aa25.15■■□□□ 1.62
PSEN2-209ENST00000521431 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
PSEN2-209ENST00000521431 ZNF428Q96B54 188 aa25.15■■□□□ 1.62
PSEN2-209ENST00000521431 FAM89AQ96GI7 184 aa25.15■■□□□ 1.62
PSEN2-209ENST00000521431 EYA3Q99504 573 aa25.15■■□□□ 1.62
PSEN2-209ENST00000521431 ISCA1Q9BUE6 129 aa25.15■■□□□ 1.62
PSEN2-209ENST00000521431 ZBTB12Q9Y330 459 aaPredicted RBP25.15■■□□□ 1.62
PSEN2-209ENST00000521431 DDX60Q8IY21 1712 aaKnown RBP25.15■■□□□ 1.62
PSEN2-209ENST00000521431 SHTN1A0MZ66 631 aa25.14■■□□□ 1.62
PSEN2-209ENST00000521431 C6orf229H3BNL8 230 aa25.14■■□□□ 1.62
PSEN2-209ENST00000521431 PSMD14O00487 310 aa25.14■■□□□ 1.62
PSEN2-209ENST00000521431 USP48Q86UV5 1035 aa25.14■■□□□ 1.62
PSEN2-209ENST00000521431 CELF1Q92879 486 aaKnown RBP25.14■■□□□ 1.62
PSEN2-209ENST00000521431 DBNDD1Q9H9R9 158 aa25.14■■□□□ 1.62
PSEN2-209ENST00000521431 TAF1P21675 1872 aa25.13■■□□□ 1.61
PSEN2-209ENST00000521431 RPS12P25398 132 aaKnown RBP25.13■■□□□ 1.61
PSEN2-209ENST00000521431 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
PSEN2-209ENST00000521431 ATP5J2-PTCD1G3V325 749 aa25.12■■□□□ 1.61
PSEN2-209ENST00000521431 RIMBP2O15034 1052 aa25.12■■□□□ 1.61
PSEN2-209ENST00000521431 HUNKP57058 714 aa25.12■■□□□ 1.61
PSEN2-209ENST00000521431 SAMD7Q7Z3H4 446 aa25.12■■□□□ 1.61
PSEN2-209ENST00000521431 HYPKQ9NX55 129 aa25.12■■□□□ 1.61
PSEN2-209ENST00000521431 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
PSEN2-209ENST00000521431 MLLT1Q03111 559 aaPredicted RBP25.11■■□□□ 1.61
PSEN2-209ENST00000521431 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.61
PSEN2-209ENST00000521431 KRT26Q7Z3Y9 468 aa25.11■■□□□ 1.61
PSEN2-209ENST00000521431 TRIM35Q9UPQ4 493 aa25.11■■□□□ 1.61
PSEN2-209ENST00000521431 ECE2O60344 883 aa25.1■■□□□ 1.61
PSEN2-209ENST00000521431 GPSM2P81274 684 aa25.1■■□□□ 1.61
PSEN2-209ENST00000521431 TBC1D10BQ4KMP7 808 aaPredicted RBP25.1■■□□□ 1.61
PSEN2-209ENST00000521431 DCPSQ96C86 337 aaKnown RBP25.1■■□□□ 1.61
PSEN2-209ENST00000521431 POLLQ9UGP5 575 aa25.1■■□□□ 1.61
PSEN2-209ENST00000521431 IRS4O14654 1257 aaPredicted RBP25.09■■□□□ 1.61
PSEN2-209ENST00000521431 HSP90B1P14625 803 aaKnown RBP25.09■■□□□ 1.61
PSEN2-209ENST00000521431 TRIM28Q13263 835 aaKnown RBP25.09■■□□□ 1.61
PSEN2-209ENST00000521431 C2orf69Q8N8R5 385 aa25.09■■□□□ 1.61
PSEN2-209ENST00000521431 MCOLN1Q9GZU1 580 aa25.09■■□□□ 1.61
PSEN2-209ENST00000521431 RGS19P49795 217 aa25.08■■□□□ 1.61
PSEN2-209ENST00000521431 RPS8P62241 208 aaKnown RBP25.08■■□□□ 1.61
PSEN2-209ENST00000521431 RTL5Q5HYW3 569 aaPredicted RBP25.08■■□□□ 1.61
PSEN2-209ENST00000521431 GBA2Q9HCG7 927 aaPredicted RBP25.08■■□□□ 1.61
PSEN2-209ENST00000521431 DOK7Q18PE1 504 aa25.07■■□□□ 1.6
PSEN2-209ENST00000521431 RBM26Q5T8P6 1007 aaKnown RBP25.07■■□□□ 1.6
PSEN2-209ENST00000521431 DUSP27Q5VZP5 1158 aa25.07■■□□□ 1.6
PSEN2-209ENST00000521431 RGMBQ6NW40 437 aa25.07■■□□□ 1.6
PSEN2-209ENST00000521431 TBC1D16Q8TBP0 767 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms