RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 CWC25Q9NXE8 425 aaPredicted RBP27.69■■■□□ 2.02
HOXA3-204ENST00000521401 DDX60Q8IY21 1712 aaKnown RBP27.69■■■□□ 2.02
HOXA3-204ENST00000521401 ZNF521Q96K83 1311 aa27.68■■■□□ 2.02
HOXA3-204ENST00000521401 PCCAP05165 728 aaPredicted RBP27.68■■■□□ 2.02
HOXA3-204ENST00000521401 CELF1Q92879 486 aaKnown RBP27.68■■■□□ 2.02
HOXA3-204ENST00000521401 CEP350Q5VT06 3117 aa27.67■■■□□ 2.02
HOXA3-204ENST00000521401 JARID2Q92833 1246 aaPredicted RBP27.67■■■□□ 2.02
HOXA3-204ENST00000521401 TMX4Q9H1E5 349 aaPredicted RBP27.67■■■□□ 2.02
HOXA3-204ENST00000521401 APLP1P51693 650 aa27.66■■■□□ 2.02
HOXA3-204ENST00000521401 JDP2Q8WYK2 163 aa27.66■■■□□ 2.02
HOXA3-204ENST00000521401 FLIIQ13045 1269 aa27.65■■■□□ 2.02
HOXA3-204ENST00000521401 LARGE2Q8N3Y3 721 aa27.65■■■□□ 2.02
HOXA3-204ENST00000521401 TMC4Q7Z404 712 aa27.64■■■□□ 2.02
HOXA3-204ENST00000521401 MPNDQ8N594 471 aa27.64■■■□□ 2.02
HOXA3-204ENST00000521401 VPS33BQ9H267 617 aa27.64■■■□□ 2.02
HOXA3-204ENST00000521401 COL4A1P02462 1669 aa27.64■■■□□ 2.02
HOXA3-204ENST00000521401 PPIP5K2O43314 1243 aa27.63■■■□□ 2.01
HOXA3-204ENST00000521401 AOC3Q16853 763 aa27.63■■■□□ 2.01
HOXA3-204ENST00000521401 DPP8Q6V1X1 898 aaPredicted RBP27.63■■■□□ 2.01
HOXA3-204ENST00000521401 MYH16Q9H6N6 1097 aa27.63■■■□□ 2.01
HOXA3-204ENST00000521401 POTEIP0CG38 1075 aa27.62■■■□□ 2.01
HOXA3-204ENST00000521401 POTEJP0CG39 1038 aa27.62■■■□□ 2.01
HOXA3-204ENST00000521401 SUPT20HQ8NEM7 779 aa27.62■■■□□ 2.01
HOXA3-204ENST00000521401 TAF1DQ9H5J8 278 aaPredicted RBP27.62■■■□□ 2.01
HOXA3-204ENST00000521401 IQCA1LA6NCM1 817 aa27.61■■■□□ 2.01
HOXA3-204ENST00000521401 NEURL1BA8MQ27 555 aa27.61■■■□□ 2.01
HOXA3-204ENST00000521401 PDE8AO60658 829 aa27.61■■■□□ 2.01
HOXA3-204ENST00000521401 CWF19L2Q2TBE0 894 aaKnown RBP27.61■■■□□ 2.01
HOXA3-204ENST00000521401 GPC2Q8N158 579 aa27.61■■■□□ 2.01
HOXA3-204ENST00000521401 SEC31BQ9NQW1 1179 aa27.61■■■□□ 2.01
HOXA3-204ENST00000521401 CDHR2Q9BYE9 1310 aa27.61■■■□□ 2.01
HOXA3-204ENST00000521401 HSP90B1P14625 803 aaKnown RBP27.6■■■□□ 2.01
HOXA3-204ENST00000521401 EIF6P56537 245 aaKnown RBP27.6■■■□□ 2.01
HOXA3-204ENST00000521401 RPS8P62241 208 aaKnown RBP27.59■■■□□ 2.01
HOXA3-204ENST00000521401 NEXNQ0ZGT2 675 aa27.59■■■□□ 2.01
HOXA3-204ENST00000521401 NIM1KQ8IY84 436 aa27.59■■■□□ 2.01
HOXA3-204ENST00000521401 DNAJC5GQ8N7S2 189 aa27.59■■■□□ 2.01
HOXA3-204ENST00000521401 TAF1P21675 1872 aa27.58■■■□□ 2.01
HOXA3-204ENST00000521401 HTRA3P83110 453 aa27.58■■■□□ 2.01
HOXA3-204ENST00000521401 KIAA2012Q0VF49 1180 aa27.58■■■□□ 2.01
HOXA3-204ENST00000521401 FKBP5Q13451 457 aaPredicted RBP27.58■■■□□ 2.01
HOXA3-204ENST00000521401 HACL1Q9UJ83 578 aa27.58■■■□□ 2.01
HOXA3-204ENST00000521401 DUOX1Q9NRD9 1551 aa27.57■■■□□ 2
HOXA3-204ENST00000521401 DNAAF4Q8WXU2 420 aa27.57■■■□□ 2
HOXA3-204ENST00000521401 H7C1W4 665 aa27.56■■■□□ 2
HOXA3-204ENST00000521401 GPSM2P81274 684 aa27.56■■■□□ 2
HOXA3-204ENST00000521401 CCDC152Q4G0S7 254 aa27.56■■■□□ 2
HOXA3-204ENST00000521401 CHADLQ6NUI6 762 aa27.56■■■□□ 2
HOXA3-204ENST00000521401 CCDC85AQ96PX6 553 aaPredicted RBP27.56■■■□□ 2
HOXA3-204ENST00000521401 GJA3Q9Y6H8 435 aa27.56■■■□□ 2
HOXA3-204ENST00000521401 LRRC37AA6NMS7 1700 aa27.55■■■□□ 2
HOXA3-204ENST00000521401 EPHX2P34913 555 aa27.55■■■□□ 2
HOXA3-204ENST00000521401 ZNRF3Q9ULT6 936 aa27.55■■■□□ 2
HOXA3-204ENST00000521401 NSFL1CQ9UNZ2 370 aaKnown RBP27.55■■■□□ 2
HOXA3-204ENST00000521401 CCER2I3L3R5 266 aa27.54■■■□□ 2
HOXA3-204ENST00000521401 GCKRQ14397 625 aa27.54■■■□□ 2
HOXA3-204ENST00000521401 LDHDQ86WU2 507 aa27.54■■■□□ 2
HOXA3-204ENST00000521401 POLLQ9UGP5 575 aa27.54■■■□□ 2
HOXA3-204ENST00000521401 SCNN1DP51172 638 aa27.53■■■□□ 2
HOXA3-204ENST00000521401 CASP7P55210 303 aa27.53■■■□□ 2
HOXA3-204ENST00000521401 CTSWP56202 376 aa27.53■■■□□ 2
HOXA3-204ENST00000521401 CXCL9Q07325 125 aa27.53■■■□□ 2
HOXA3-204ENST00000521401 LINS1Q8NG48 757 aa27.52■■■□□ 2
HOXA3-204ENST00000521401 TTLL11Q8NHH1 800 aa27.52■■■□□ 2
HOXA3-204ENST00000521401 SCN4AP35499 1836 aa27.52■■■□□ 2
HOXA3-204ENST00000521401 F6X3S4 739 aa27.51■■□□□ 1.99
HOXA3-204ENST00000521401 UBE3BQ7Z3V4 1068 aa27.51■■□□□ 1.99
HOXA3-204ENST00000521401 YDJCA8MPS7 323 aa27.5■■□□□ 1.99
HOXA3-204ENST00000521401 EAPPQ56P03 285 aaPredicted RBP27.5■■□□□ 1.99
HOXA3-204ENST00000521401 TBC1D16Q8TBP0 767 aa27.5■■□□□ 1.99
HOXA3-204ENST00000521401 PLA2G12BQ9BX93 195 aa27.5■■□□□ 1.99
HOXA3-204ENST00000521401 PODXL2Q9NZ53 605 aa27.5■■□□□ 1.99
HOXA3-204ENST00000521401 EPS15P42566 896 aa27.49■■□□□ 1.99
HOXA3-204ENST00000521401 WASHC4Q2M389 1173 aa27.49■■□□□ 1.99
HOXA3-204ENST00000521401 BEND3Q5T5X7 828 aa27.49■■□□□ 1.99
HOXA3-204ENST00000521401 GREM2Q9H772 168 aa27.49■■□□□ 1.99
HOXA3-204ENST00000521401 LTBP1Q14766 1721 aa27.49■■□□□ 1.99
HOXA3-204ENST00000521401 E9PSI1 815 aa27.48■■□□□ 1.99
HOXA3-204ENST00000521401 SLFN5Q08AF3 891 aa27.48■■□□□ 1.99
HOXA3-204ENST00000521401 PNMA8AQ86V59 439 aaPredicted RBP27.48■■□□□ 1.99
HOXA3-204ENST00000521401 RTL9Q8NET4 1388 aa27.48■■□□□ 1.99
HOXA3-204ENST00000521401 C6orf229H3BNL8 230 aa27.47■■□□□ 1.99
HOXA3-204ENST00000521401 ANKRD18AQ8IVF6 992 aa27.47■■□□□ 1.99
HOXA3-204ENST00000521401 GPR101Q96P66 508 aaPredicted RBP27.47■■□□□ 1.99
HOXA3-204ENST00000521401 RIMBP2O15034 1052 aa27.46■■□□□ 1.99
HOXA3-204ENST00000521401 RAD17O75943 681 aa27.46■■□□□ 1.99
HOXA3-204ENST00000521401 LMOD1P29536 600 aaPredicted RBP27.46■■□□□ 1.99
HOXA3-204ENST00000521401 CIAPIN1Q6FI81 312 aa27.46■■□□□ 1.99
HOXA3-204ENST00000521401 ADAMTSL1Q8N6G6 1762 aa27.45■■□□□ 1.99
HOXA3-204ENST00000521401 PASKQ96RG2 1323 aa27.45■■□□□ 1.99
HOXA3-204ENST00000521401 ITGBL1O95965 494 aaPredicted RBP27.45■■□□□ 1.98
HOXA3-204ENST00000521401 KLRG1Q96E93 195 aa27.45■■□□□ 1.98
HOXA3-204ENST00000521401 CDC5LQ99459 802 aaKnown RBP27.45■■□□□ 1.98
HOXA3-204ENST00000521401 CSF1RP07333 972 aa27.44■■□□□ 1.98
HOXA3-204ENST00000521401 CDCA7LQ96GN5 454 aa27.44■■□□□ 1.98
HOXA3-204ENST00000521401 EYA3Q99504 573 aa27.44■■□□□ 1.98
HOXA3-204ENST00000521401 DBNDD1Q9H9R9 158 aa27.44■■□□□ 1.98
HOXA3-204ENST00000521401 GPRC5DQ9NZD1 345 aa27.44■■□□□ 1.98
HOXA3-204ENST00000521401 CLEC11AQ9Y240 323 aa27.44■■□□□ 1.98
HOXA3-204ENST00000521401 CACNA1FO60840 1977 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms