RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FOXR1Q6PIV2 292 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 SCARF2Q96GP6 870 aaPredicted RBP5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 USP20Q9Y2K6 914 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 CNTNAP5Q8WYK1 1306 aa5.65□□□□□ -1.51
HMGN1P28-201ENST00000521340 F11P03951 625 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 BCRP11274 1271 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 MSX1P28360 303 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 GNA15P30679 374 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 IDH3AP50213 366 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 UBAP2LQ14157 1087 aaKnown RBP5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 GNASQ5JWF2 1037 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 USPL1Q5W0Q7 1092 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 ALG1LQ6GMV1 187 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 BTLAQ7Z6A9 289 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 DNAJC25Q9H1X3 360 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 AK5Q9Y6K8 562 aa5.64□□□□□ -1.51
HMGN1P28-201ENST00000521340 TNFRSF21O75509 655 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 EGFRP00533 1210 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 C9orf131Q5VYM1 1079 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 GPAT2Q6NUI2 795 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 RHPN1Q8TCX5 695 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 TMC1Q8TDI8 760 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 TRERF1Q96PN7 1200 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 OSBPL7Q9BZF2 842 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 NUCKS1Q9H1E3 243 aaKnown RBP5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 CHRDQ9H2X0 955 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 CRISPLD1Q9H336 500 aa5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
HMGN1P28-201ENST00000521340 SORBS3O60504 671 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 ITGB2P05107 769 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 MX2P20592 715 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 TYRO3Q06418 890 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 AIDAQ96BJ3 306 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 ZFYVE28Q9HCC9 887 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 ENAMQ9NRM1 1142 aa5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.62□□□□□ -1.51
HMGN1P28-201ENST00000521340 ZC3H6P61129 1189 aaKnown RBP5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 FGD1P98174 961 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 NBPF1Q3BBV0 1214 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 PDE12Q6L8Q7 609 aaKnown RBP5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 PI16Q6UXB8 463 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 EPS8L3Q8TE67 593 aaKnown RBP5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 PIK3R5Q8WYR1 880 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 GPAMQ9HCL2 828 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 C11orf16Q9NQ32 467 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 METTL5Q9NRN9 209 aaKnown RBP5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 TMEM63CQ9P1W3 806 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 CNTN3Q9P232 1028 aa5.61□□□□□ -1.51
HMGN1P28-201ENST00000521340 A0A1B0GTH6 734 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 A0A1W2PNR3 127 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 OIP5O43482 229 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 CPNE3O75131 537 aaKnown RBP5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 IGHA1P01876 353 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 RPLP1P05386 114 aaKnown RBP5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 ARSDP51689 593 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 KCNQ4P56696 695 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 XPCQ01831 940 aaPredicted RBP5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 PTPN12Q05209 780 aaKnown RBP5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 PSMD2Q13200 908 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 HIF1AQ16665 826 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 SAMD5Q5TGI4 173 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 LRRC69Q6ZNQ3 347 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 C1orf229Q6ZS94 237 aaPredicted RBP5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 NT5DC4Q86YG4 428 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 TMEM87AQ8NBN3 555 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 NEDD1Q8NHV4 660 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 CCDC74AQ96AQ1 378 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 DCAF5Q96JK2 942 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 FRMD6Q96NE9 622 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 ELP3Q9H9T3 547 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 LRRC4BQ9NT99 713 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 FAM13BQ9NYF5 915 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 ANKIB1Q9P2G1 1089 aa5.6□□□□□ -1.51
HMGN1P28-201ENST00000521340 USP31Q70CQ4 1352 aa5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 EFSO43281 561 aa5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 TATP17735 454 aaPredicted RBP5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 C8orf34Q49A92 452 aa5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 NAALADL2Q58DX5 795 aa5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 BEND7Q8N7W2 519 aaPredicted RBP5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 TINF2Q9BSI4 451 aa5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 RUBCNLQ9H714 662 aa5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 SRA1Q9HD15 236 aaKnown RBP5.59□□□□□ -1.51
HMGN1P28-201ENST00000521340 PHF20L1A8MW92 1017 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 SHISA8B8ZZ34 492 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 C2CD2LO14523 706 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 GTF2E1P29083 439 aaPredicted RBP5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 SNRPNP63162 240 aaKnown RBP5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 RACK1P63244 317 aaKnown RBP5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 ATP2B2Q01814 1243 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 PLA2G4EQ3MJ16 856 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 NLRP8Q86W28 1048 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 GALNT12Q8IXK2 581 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 C1orf127Q8N9H9 656 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 GLIS3Q8NEA6 775 aa5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 OXCT2Q9BYC2 517 aaPredicted RBP5.58□□□□□ -1.52
HMGN1P28-201ENST00000521340 NDFIP2Q9NV92 336 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 385.5 ms